EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
WBGene00004485 (Gene tree)
Gene ID
-
Gene Symbol
rps-16
Alias
-
Full Name
40S ribosomal protein S16
Gene Type
protein_coding
Species
Caenorhabditis_elegans
Status
confidence
Strand
Minus strand
Length
584 bases
Position
chrV:15000011-15000594
Accession
Q22054
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
T01C3Ribosomal_S9PF00380.196.8e-3511
T01C3Ribosomal_S9PF00380.196.8e-3511
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
26595419Conserved mRNA binding proteomes in eukaryotic organismsmRBPome & elegans2015 Nov 23Matia-Gonzalez AMDOI: 10.1038/nsmb.3128
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
T01C3.6.1-533NM_074289T01C3.6.1144 (aa)NP_506690Q22054
T01C3.6.2-487NM_074289T01C3.6.2144 (aa)NP_506690Q22054
Gene Model
Click here to download WBGene00004485's gene model file
Protein-Protein Interaction (PPI)

Clik here to download WBGene00004485's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
WBGene00004485rps-169777.143ENSG00000105193RPS169677.143Homo_sapiens
WBGene00004485rps-169777.857ENSAPOG00000018869rps169677.857Acanthochromis_polyacanthus
WBGene00004485rps-169777.143ENSAMEG00000008470RPS168577.143Ailuropoda_melanoleuca
WBGene00004485rps-169777.857ENSACIG00000013386rps169677.857Amphilophus_citrinellus
WBGene00004485rps-165273.333ENSAOCG00000012472rps166973.333Amphiprion_ocellaris
WBGene00004485rps-169777.857ENSAPEG00000021214rps169677.857Amphiprion_percula
WBGene00004485rps-169777.857ENSATEG00000023236rps169677.857Anabas_testudineus
WBGene00004485rps-169276.692ENSAPLG00000015907RPS168376.692Anas_platyrhynchos
WBGene00004485rps-169777.143ENSACAG00000014176RPS169677.143Anolis_carolinensis
WBGene00004485rps-166162.500ENSANAG00000032495-7262.500Aotus_nancymaae
WBGene00004485rps-169777.143ENSANAG00000038201RPS169677.143Aotus_nancymaae
WBGene00004485rps-169777.143ENSACLG00000017963rps169677.143Astatotilapia_calliptera
WBGene00004485rps-169776.429ENSAMXG00000033866rps169676.429Astyanax_mexicanus
WBGene00004485rps-169777.143ENSBTAG00000021093RPS169677.143Bos_taurus
WBGene00004485rps-169776.429ENSBTAG00000001538-9676.429Bos_taurus
WBGene00004485rps-169777.143ENSCJAG00000014170RPS169677.143Callithrix_jacchus
WBGene00004485rps-169777.143ENSCAFG00000005501RPS168877.143Canis_familiaris
WBGene00004485rps-169777.143ENSCAFG00020015850RPS168077.143Canis_lupus_dingo
WBGene00004485rps-169777.143ENSCHIG00000024160RPS169677.143Capra_hircus
WBGene00004485rps-167472.642ENSTSYG00000033803-7672.642Carlito_syrichta
WBGene00004485rps-169767.143ENSTSYG00000027688-9559.286Carlito_syrichta
WBGene00004485rps-167867.857ENSTSYG00000031676-9367.857Carlito_syrichta
WBGene00004485rps-169363.433ENSCAPG00000013630-9663.433Cavia_aperea
WBGene00004485rps-166975.758ENSCAPG00000009781RPS168575.758Cavia_aperea
WBGene00004485rps-169763.830ENSCPOG00000004094-9663.830Cavia_porcellus
WBGene00004485rps-169361.194ENSCPOG00000022096-9561.194Cavia_porcellus
WBGene00004485rps-169777.143ENSCPOG00000039193RPS169677.143Cavia_porcellus
WBGene00004485rps-169777.143ENSCCAG00000031391-9677.143Cebus_capucinus
WBGene00004485rps-169771.429ENSCCAG00000021159-9368.675Cebus_capucinus
WBGene00004485rps-169776.429ENSCATG00000044702-9576.429Cercocebus_atys
WBGene00004485rps-169764.286ENSCATG00000022024-9564.286Cercocebus_atys
WBGene00004485rps-169777.143ENSCATG00000029820-9677.143Cercocebus_atys
WBGene00004485rps-169762.143ENSCATG00000033695-9562.143Cercocebus_atys
WBGene00004485rps-169777.143ENSCLAG00000016798RPS169677.143Chinchilla_lanigera
WBGene00004485rps-169765.714ENSCLAG00000000455-9665.714Chinchilla_lanigera
WBGene00004485rps-169777.143ENSCSAG00000003832RPS169677.143Chlorocebus_sabaeus
WBGene00004485rps-165374.026ENSCHOG00000001903RPS168850.000Choloepus_hoffmanni
WBGene00004485rps-169777.143ENSCPBG00000000062RPS169677.143Chrysemys_picta_bellii
WBGene00004485rps-1610072.414ENSCING00000020211-9872.414Ciona_intestinalis
WBGene00004485rps-169969.231ENSCSAVG00000008650-9969.231Ciona_savignyi
WBGene00004485rps-169777.143ENSCANG00000009921-9677.143Colobus_angolensis_palliatus
WBGene00004485rps-169770.000ENSCANG00000040725-9562.143Colobus_angolensis_palliatus
WBGene00004485rps-169172.519ENSCANG00000038073-8772.519Colobus_angolensis_palliatus
WBGene00004485rps-169070.000ENSCANG00000000337-9470.000Colobus_angolensis_palliatus
WBGene00004485rps-169777.143ENSCGRG00001019101-9677.143Cricetulus_griseus_chok1gshd
WBGene00004485rps-169551.825ENSCGRG00001022379-9951.825Cricetulus_griseus_chok1gshd
WBGene00004485rps-168461.983ENSCGRG00001015054-8061.983Cricetulus_griseus_chok1gshd
WBGene00004485rps-169260.000ENSCGRG00001021850-9560.000Cricetulus_griseus_chok1gshd
WBGene00004485rps-169459.420ENSCGRG00000004493-9559.420Cricetulus_griseus_crigri
WBGene00004485rps-168572.131ENSCGRG00000011228Rps169372.131Cricetulus_griseus_crigri
WBGene00004485rps-169777.143ENSCSEG00000004450-9677.143Cynoglossus_semilaevis
WBGene00004485rps-169777.143ENSCSEG00000004454rps169677.143Cynoglossus_semilaevis
WBGene00004485rps-169777.143ENSCVAG00000016397rps169677.143Cyprinodon_variegatus
WBGene00004485rps-169777.857ENSDARG00000045487rps169677.857Danio_rerio
WBGene00004485rps-169765.000ENSDNOG00000044867-9565.000Dasypus_novemcinctus
WBGene00004485rps-169777.143ENSDNOG00000031942-9677.143Dasypus_novemcinctus
WBGene00004485rps-169447.794ENSDNOG00000035437-9447.794Dasypus_novemcinctus
WBGene00004485rps-169766.187ENSDNOG00000041662-8766.187Dasypus_novemcinctus
WBGene00004485rps-169662.319ENSDNOG00000039075-8562.319Dasypus_novemcinctus
WBGene00004485rps-169176.336ENSDORG00000005000Rps169376.336Dipodomys_ordii
WBGene00004485rps-169775.714FBgn0034743RpS169575.714Drosophila_melanogaster
WBGene00004485rps-165376.623ENSETEG00000015290RPS165276.623Echinops_telfairi
WBGene00004485rps-169774.820ENSEBUG00000006941-9574.820Eptatretus_burgeri
WBGene00004485rps-169777.143ENSEASG00005012781-9677.143Equus_asinus_asinus
WBGene00004485rps-169777.143ENSECAG00000004311RPS169677.143Equus_caballus
WBGene00004485rps-169777.143ENSELUG00000002525RS169677.143Esox_lucius
WBGene00004485rps-169555.474ENSFCAG00000036480-9455.474Felis_catus
WBGene00004485rps-169777.143ENSFCAG00000010743RPS169677.143Felis_catus
WBGene00004485rps-169077.692ENSFALG00000010493RPS1610077.692Ficedula_albicollis
WBGene00004485rps-169777.143ENSFDAG00000021430RPS169677.143Fukomys_damarensis
WBGene00004485rps-169777.857ENSFHEG00000021489rps169677.857Fundulus_heteroclitus
WBGene00004485rps-169778.571ENSGMOG00000001796rps168978.571Gadus_morhua
WBGene00004485rps-169777.857ENSGALG00000026490RPS169677.857Gallus_gallus
WBGene00004485rps-169777.857ENSGAFG00000016659rps169677.857Gambusia_affinis
WBGene00004485rps-169777.143ENSGACG00000020009rps169677.143Gasterosteus_aculeatus
WBGene00004485rps-169777.143ENSGAGG00000008791RPS169677.143Gopherus_agassizii
WBGene00004485rps-169770.714ENSGGOG00000040836-8770.714Gorilla_gorilla
WBGene00004485rps-169669.565ENSGGOG00000038427-7869.565Gorilla_gorilla
WBGene00004485rps-169777.143ENSGGOG00000014414RPS169677.143Gorilla_gorilla
WBGene00004485rps-169777.143ENSHBUG00000011868rps169677.143Haplochromis_burtoni
WBGene00004485rps-169777.143ENSHGLG00000015624RPS169677.143Heterocephalus_glaber_female
WBGene00004485rps-169756.429ENSHGLG00000003629-9556.429Heterocephalus_glaber_female
WBGene00004485rps-169763.571ENSHGLG00000010089-9563.571Heterocephalus_glaber_female
WBGene00004485rps-169770.714ENSHGLG00000012087-9670.714Heterocephalus_glaber_female
WBGene00004485rps-169961.268ENSHGLG00000014055-9761.268Heterocephalus_glaber_female
WBGene00004485rps-169756.429ENSHGLG00100011424-9556.429Heterocephalus_glaber_male
WBGene00004485rps-169763.571ENSHGLG00100014644-9563.571Heterocephalus_glaber_male
WBGene00004485rps-169777.143ENSHGLG00100008478RPS169677.143Heterocephalus_glaber_male
WBGene00004485rps-169770.714ENSHGLG00100011392-9670.714Heterocephalus_glaber_male
WBGene00004485rps-169961.268ENSHGLG00100009311-9761.268Heterocephalus_glaber_male
WBGene00004485rps-169776.429ENSHCOG00000017762rps169676.429Hippocampus_comes
WBGene00004485rps-169776.429ENSIPUG00000024494rps169476.429Ictalurus_punctatus
WBGene00004485rps-169777.143ENSSTOG00000006794RPS169677.143Ictidomys_tridecemlineatus
WBGene00004485rps-169064.341ENSJJAG00000009525-7564.341Jaculus_jaculus
WBGene00004485rps-169776.429ENSJJAG00000000767-9676.429Jaculus_jaculus
WBGene00004485rps-169777.857ENSKMAG00000012230rps169677.857Kryptolebias_marmoratus
WBGene00004485rps-169776.429ENSLBEG00000022009rps169676.429Labrus_bergylta
WBGene00004485rps-169777.143ENSLACG00000015556RPS166977.143Latimeria_chalumnae
WBGene00004485rps-169777.143ENSLOCG00000016289rps169177.143Lepisosteus_oculatus
WBGene00004485rps-169777.143ENSLAFG00000001541RPS168777.143Loxodonta_africana
WBGene00004485rps-169763.309ENSMFAG00000003214-9563.309Macaca_fascicularis
WBGene00004485rps-169672.464ENSMFAG00000039487-9972.464Macaca_fascicularis
WBGene00004485rps-169777.143ENSMFAG00000046032RPS169677.143Macaca_fascicularis
WBGene00004485rps-169763.571ENSMMUG00000040167-9563.571Macaca_mulatta
WBGene00004485rps-169271.212ENSMMUG00000048090-9571.212Macaca_mulatta
WBGene00004485rps-169777.143ENSMMUG00000019370RPS169677.143Macaca_mulatta
WBGene00004485rps-169777.143ENSMNEG00000044563-9677.143Macaca_nemestrina
WBGene00004485rps-169672.464ENSMNEG00000028528-9972.464Macaca_nemestrina
WBGene00004485rps-169575.182ENSMNEG00000013932-9875.182Macaca_nemestrina
WBGene00004485rps-169464.234ENSMLEG00000034982-9464.234Mandrillus_leucophaeus
WBGene00004485rps-169755.714ENSMLEG00000028116-9455.714Mandrillus_leucophaeus
WBGene00004485rps-169777.143ENSMLEG00000037036RPS169677.143Mandrillus_leucophaeus
WBGene00004485rps-169777.857ENSMAMG00000015224rps169677.857Mastacembelus_armatus
WBGene00004485rps-169777.143ENSMZEG00005001975rps169677.143Maylandia_zebra
WBGene00004485rps-169777.857ENSMGAG00000011060RPS168877.857Meleagris_gallopavo
WBGene00004485rps-169777.143ENSMAUG00000016611Rps169677.143Mesocricetus_auratus
WBGene00004485rps-169777.143ENSMICG00000006110RPS169677.143Microcebus_murinus
WBGene00004485rps-169775.714ENSMOCG00000005888-8575.714Microtus_ochrogaster
WBGene00004485rps-169766.429ENSMOCG00000019458-9566.429Microtus_ochrogaster
WBGene00004485rps-169777.143ENSMOCG00000011128-9677.143Microtus_ochrogaster
WBGene00004485rps-169777.857ENSMMOG00000006885rps169677.857Mola_mola
WBGene00004485rps-169777.143ENSMODG00000013545-9677.143Monodelphis_domestica
WBGene00004485rps-169777.857ENSMALG00000011119rps169677.857Monopterus_albus
WBGene00004485rps-169777.143MGP_CAROLIEiJ_G0029442Rps169677.143Mus_caroli
WBGene00004485rps-169777.143ENSMUSG00000037563Rps169677.143Mus_musculus
WBGene00004485rps-169777.143MGP_PahariEiJ_G0012678Rps169677.143Mus_pahari
WBGene00004485rps-169777.143MGP_SPRETEiJ_G0030540Rps169677.143Mus_spretus
WBGene00004485rps-169777.143ENSMPUG00000017722-8777.143Mustela_putorius_furo
WBGene00004485rps-169777.143ENSMLUG00000029089-9677.143Myotis_lucifugus
WBGene00004485rps-169762.143ENSNGAG00000012912-9662.143Nannospalax_galili
WBGene00004485rps-169777.143ENSNGAG00000022095-9677.143Nannospalax_galili
WBGene00004485rps-169777.143ENSNBRG00000010637rps169677.143Neolamprologus_brichardi
WBGene00004485rps-169074.615ENSNLEG00000014388-10074.615Nomascus_leucogenys
WBGene00004485rps-169251.515ENSNLEG00000035942-9453.788Nomascus_leucogenys
WBGene00004485rps-167666.364ENSNLEG00000030396-7966.364Nomascus_leucogenys
WBGene00004485rps-169769.784ENSNLEG00000018560-8769.784Nomascus_leucogenys
WBGene00004485rps-169355.970ENSNLEG00000033793-10055.970Nomascus_leucogenys
WBGene00004485rps-165376.623ENSMEUG00000010380RPS165376.623Notamacropus_eugenii
WBGene00004485rps-169758.865ENSODEG00000005256-9558.865Octodon_degus
WBGene00004485rps-169775.000ENSODEG00000019798-9675.000Octodon_degus
WBGene00004485rps-168267.797ENSODEG00000019275-9567.797Octodon_degus
WBGene00004485rps-169968.310ENSODEG00000019277-9768.310Octodon_degus
WBGene00004485rps-169777.857ENSONIG00000000006rps169677.857Oreochromis_niloticus
WBGene00004485rps-165873.810ENSOANG00000001526RPS1610073.810Ornithorhynchus_anatinus
WBGene00004485rps-169777.143ENSOCUG00000002150RPS168177.143Oryctolagus_cuniculus
WBGene00004485rps-169777.143ENSORLG00000016271rps169677.143Oryzias_latipes
WBGene00004485rps-169777.143ENSORLG00020009654rps169677.143Oryzias_latipes_hni
WBGene00004485rps-169777.143ENSORLG00015000252rps169677.143Oryzias_latipes_hsok
WBGene00004485rps-169777.857ENSOMEG00000003840rps169677.857Oryzias_melastigma
WBGene00004485rps-169777.143ENSOGAG00000004497RPS169577.143Otolemur_garnettii
WBGene00004485rps-169772.857ENSOGAG00000034376-9672.857Otolemur_garnettii
WBGene00004485rps-169159.542ENSOGAG00000033895-8759.542Otolemur_garnettii
WBGene00004485rps-169762.857ENSOARG00000006118RPS168862.857Ovis_aries
WBGene00004485rps-169771.429ENSPPAG00000042734-8371.429Pan_paniscus
WBGene00004485rps-169768.571ENSPPAG00000004526-9668.571Pan_paniscus
WBGene00004485rps-169777.143ENSPPAG00000025689-9677.143Pan_paniscus
WBGene00004485rps-169777.143ENSPPRG00000010165-9677.143Panthera_pardus
WBGene00004485rps-169777.143ENSPTIG00000011216RPS169677.143Panthera_tigris_altaica
WBGene00004485rps-169772.143ENSPTRG00000048713-8372.143Pan_troglodytes
WBGene00004485rps-169765.714ENSPTRG00000041276-9565.714Pan_troglodytes
WBGene00004485rps-169777.143ENSPTRG00000010970RPS169677.143Pan_troglodytes
WBGene00004485rps-169776.429ENSPANG00000014419-9576.429Papio_anubis
WBGene00004485rps-169753.571ENSPANG00000012953-9453.571Papio_anubis
WBGene00004485rps-165873.494ENSPANG00000034481-5573.494Papio_anubis
WBGene00004485rps-169273.485ENSPANG00000035696-9273.485Papio_anubis
WBGene00004485rps-169775.000ENSPKIG00000001864rps169675.000Paramormyrops_kingsleyae
WBGene00004485rps-169777.857ENSPKIG00000004000-9677.857Paramormyrops_kingsleyae
WBGene00004485rps-169776.596ENSPSIG00000016930-8776.596Pelodiscus_sinensis
WBGene00004485rps-169777.143ENSPMGG00000001881rps169677.143Periophthalmus_magnuspinnatus
WBGene00004485rps-169773.571ENSPEMG00000004700-9673.571Peromyscus_maniculatus_bairdii
WBGene00004485rps-169753.571ENSPCIG00000030553-9553.571Phascolarctos_cinereus
WBGene00004485rps-167174.510ENSPCIG00000010483RPS169174.510Phascolarctos_cinereus
WBGene00004485rps-169777.143ENSPFOG00000017508rps169677.143Poecilia_formosa
WBGene00004485rps-169777.143ENSPLAG00000011432rps169677.143Poecilia_latipinna
WBGene00004485rps-169777.143ENSPMEG00000019624rps169677.143Poecilia_mexicana
WBGene00004485rps-169776.429ENSPREG00000022479rps169676.429Poecilia_reticulata
WBGene00004485rps-166775.000ENSPPYG00000001836-10075.000Pongo_abelii
WBGene00004485rps-169772.857ENSPPYG00000020087-9672.857Pongo_abelii
WBGene00004485rps-169777.143ENSPPYG00000004494-9677.143Pongo_abelii
WBGene00004485rps-168850.000ENSPCAG00000010666RPS169050.000Procavia_capensis
WBGene00004485rps-169777.143ENSPCOG00000026211-9677.143Propithecus_coquereli
WBGene00004485rps-169763.571ENSPCOG00000011773-9556.429Propithecus_coquereli
WBGene00004485rps-169777.143ENSPNYG00000018328rps169677.143Pundamilia_nyererei
WBGene00004485rps-169777.857ENSPNAG00000002321rps169677.857Pygocentrus_nattereri
WBGene00004485rps-169770.714ENSRNOG00000031960AABR07019341.19270.714Rattus_norvegicus
WBGene00004485rps-169773.571ENSRNOG00000030143AABR07051796.18573.571Rattus_norvegicus
WBGene00004485rps-169777.143ENSRNOG00000019578Rps169677.143Rattus_norvegicus
WBGene00004485rps-169272.932ENSRBIG00000035831-9272.932Rhinopithecus_bieti
WBGene00004485rps-169776.429ENSRBIG00000034481-9676.429Rhinopithecus_bieti
WBGene00004485rps-169769.286ENSRROG00000029340-9569.286Rhinopithecus_roxellana
WBGene00004485rps-169777.143ENSRROG00000029061-9677.143Rhinopithecus_roxellana
WBGene00004485rps-169272.932ENSRROG00000032874-9272.932Rhinopithecus_roxellana
WBGene00004485rps-169968.310YMR143WRPS16A9968.310Saccharomyces_cerevisiae
WBGene00004485rps-169968.310YDL083CRPS16B9968.310Saccharomyces_cerevisiae
WBGene00004485rps-169669.565ENSSBOG00000016662-8869.565Saimiri_boliviensis_boliviensis
WBGene00004485rps-169777.143ENSSBOG00000014235RPS169677.143Saimiri_boliviensis_boliviensis
WBGene00004485rps-167368.571ENSSBOG00000013368-9568.571Saimiri_boliviensis_boliviensis
WBGene00004485rps-169773.381ENSSHAG00000009341RPS168173.381Sarcophilus_harrisii
WBGene00004485rps-169777.143ENSSFOG00015019382-9677.143Scleropages_formosus
WBGene00004485rps-169776.429ENSSFOG00015006416rps169676.429Scleropages_formosus
WBGene00004485rps-169777.143ENSSMAG00000004586rps169677.143Scophthalmus_maximus
WBGene00004485rps-169777.143ENSSDUG00000018274rps169677.143Seriola_dumerili
WBGene00004485rps-169777.143ENSSLDG00000019014rps169677.143Seriola_lalandi_dorsalis
WBGene00004485rps-165873.494ENSSARG00000000852RPS165573.494Sorex_araneus
WBGene00004485rps-169777.143ENSSPUG00000006832RPS168977.143Sphenodon_punctatus
WBGene00004485rps-169777.857ENSSPAG00000008089rps169677.857Stegastes_partitus
WBGene00004485rps-169541.606ENSSSCG00000037415-9141.606Sus_scrofa
WBGene00004485rps-169777.143ENSSSCG00000020817RPS169677.143Sus_scrofa
WBGene00004485rps-169772.857ENSSSCG00000005432-9672.857Sus_scrofa
WBGene00004485rps-169777.857ENSTGUG00000007667RPS169777.857Taeniopygia_guttata
WBGene00004485rps-169775.714ENSTRUG00000025247rps169675.714Takifugu_rubripes
WBGene00004485rps-169775.714ENSTNIG00000012651rps169075.714Tetraodon_nigroviridis
WBGene00004485rps-169771.429ENSTBEG00000005910-9371.429Tupaia_belangeri
WBGene00004485rps-165872.289ENSTTRG00000003571RPS165472.289Tursiops_truncatus
WBGene00004485rps-169777.143ENSUAMG00000020016-9677.143Ursus_americanus
WBGene00004485rps-166568.817ENSUAMG00000006633-8868.817Ursus_americanus
WBGene00004485rps-169777.143ENSUMAG00000019548-9677.143Ursus_maritimus
WBGene00004485rps-167468.868ENSUMAG00000011551-9368.868Ursus_maritimus
WBGene00004485rps-169777.143ENSVVUG00000006215-7877.143Vulpes_vulpes
WBGene00004485rps-169776.429ENSXETG00000018809rps169676.429Xenopus_tropicalis
WBGene00004485rps-169777.857ENSXCOG00000013805rps169677.857Xiphophorus_couchianus
WBGene00004485rps-169777.857ENSXMAG00000030077rps169677.857Xiphophorus_maculatus

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