EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
WBGene00004490 (Gene tree)
Gene ID
-
Gene Symbol
rps-21
Alias
-
Full Name
40S ribosomal protein S21
Gene Type
protein_coding
Species
Caenorhabditis_elegans
Status
confidence
Strand
Minus strand
Length
490 bases
Position
chrIII:7189142-7189631
Accession
P49197
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
F37C12Ribosomal_S21ePF01249.189.3e-3811
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
26595419Conserved mRNA binding proteomes in eukaryotic organismsmRBPome & elegans2015 Nov 23Matia-Gonzalez AMDOI: 10.1038/nsmb.3128
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
F37C12.11-342NM_066178F37C12.1188 (aa)NP_498579P49197
Gene Model
Click here to download WBGene00004490's gene model file
Protein-Protein Interaction (PPI)

Clik here to download WBGene00004490's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
WBGene00004490rps-219467.470ENSG00000171858RPS2110068.293Homo_sapiens
WBGene00004490rps-219467.470ENSAPOG00000004856rps219967.470Acanthochromis_polyacanthus
WBGene00004490rps-219362.195ENSAMEG00000019505-9962.195Ailuropoda_melanoleuca
WBGene00004490rps-217563.636ENSAMEG00000017399-9863.636Ailuropoda_melanoleuca
WBGene00004490rps-219369.512ENSACIG00000009542rps2110069.512Amphilophus_citrinellus
WBGene00004490rps-219467.470ENSAOCG00000021768rps219967.470Amphiprion_ocellaris
WBGene00004490rps-219467.470ENSAPEG00000004225rps219967.470Amphiprion_percula
WBGene00004490rps-219467.470ENSATEG00000024746rps219967.470Anabas_testudineus
WBGene00004490rps-219468.675ENSACAG00000005015RPS219968.675Anolis_carolinensis
WBGene00004490rps-219467.470ENSANAG00000026964RPS219967.470Aotus_nancymaae
WBGene00004490rps-219369.512ENSACLG00000008645rps2110069.512Astatotilapia_calliptera
WBGene00004490rps-219364.634ENSAMXG00000017628rps2110064.634Astyanax_mexicanus
WBGene00004490rps-219467.470ENSBTAG00000020795RPS219967.470Bos_taurus
WBGene00004490rps-219456.627ENSBTAG00000000168-8956.627Bos_taurus
WBGene00004490rps-219460.241ENSCJAG00000022436-9960.241Callithrix_jacchus
WBGene00004490rps-219467.470ENSCJAG00000014195RPS219967.470Callithrix_jacchus
WBGene00004490rps-219463.855ENSCAFG00000007508-9963.855Canis_familiaris
WBGene00004490rps-219467.470ENSCAFG00000012676RPS219967.470Canis_familiaris
WBGene00004490rps-219345.122ENSCAFG00020006444-9845.122Canis_lupus_dingo
WBGene00004490rps-219467.470ENSCAFG00020019544-9967.470Canis_lupus_dingo
WBGene00004490rps-219467.470ENSCAFG00020000870-10068.293Canis_lupus_dingo
WBGene00004490rps-219463.855ENSCAFG00020005093-9963.855Canis_lupus_dingo
WBGene00004490rps-219467.470ENSCHIG00000013467RPS219967.470Capra_hircus
WBGene00004490rps-217757.353ENSCHIG00000003525-6057.353Capra_hircus
WBGene00004490rps-219467.470ENSTSYG00000007061RPS219967.470Carlito_syrichta
WBGene00004490rps-219467.470ENSCPOG00000001965RPS219567.470Cavia_porcellus
WBGene00004490rps-219466.265ENSCCAG00000022437-9966.265Cebus_capucinus
WBGene00004490rps-219466.265ENSCCAG00000036700-9966.265Cebus_capucinus
WBGene00004490rps-219467.470ENSCATG00000031953RPS219967.470Cercocebus_atys
WBGene00004490rps-219467.470ENSCLAG00000007566RPS219967.470Chinchilla_lanigera
WBGene00004490rps-219467.470ENSCSAG00000016013RPS219967.470Chlorocebus_sabaeus
WBGene00004490rps-219467.470ENSCPBG00000027132RPS2110068.293Chrysemys_picta_bellii
WBGene00004490rps-219166.250ENSCING00000003630-9966.250Ciona_intestinalis
WBGene00004490rps-219166.250ENSCSAVG00000008429-9866.250Ciona_savignyi
WBGene00004490rps-219466.265ENSCANG00000011853-9966.265Colobus_angolensis_palliatus
WBGene00004490rps-219462.651ENSCANG00000008662-9962.651Colobus_angolensis_palliatus
WBGene00004490rps-219467.470ENSCANG00000017166-9967.470Colobus_angolensis_palliatus
WBGene00004490rps-219467.470ENSCANG00000031976-9967.470Colobus_angolensis_palliatus
WBGene00004490rps-219466.265ENSCGRG00001008024-9966.265Cricetulus_griseus_chok1gshd
WBGene00004490rps-219467.470ENSCGRG00001000966-9967.470Cricetulus_griseus_chok1gshd
WBGene00004490rps-218558.667ENSCGRG00001012274-8758.667Cricetulus_griseus_chok1gshd
WBGene00004490rps-217859.420ENSCGRG00001012810-9659.420Cricetulus_griseus_chok1gshd
WBGene00004490rps-219462.651ENSCGRG00001010025-9962.651Cricetulus_griseus_chok1gshd
WBGene00004490rps-218558.667ENSCGRG00000018755-8758.667Cricetulus_griseus_crigri
WBGene00004490rps-219462.651ENSCGRG00000019898-9962.651Cricetulus_griseus_crigri
WBGene00004490rps-217859.420ENSCGRG00000019522-9659.420Cricetulus_griseus_crigri
WBGene00004490rps-219466.265ENSCGRG00000019221-9966.265Cricetulus_griseus_crigri
WBGene00004490rps-219467.470ENSCGRG00000015137-9967.470Cricetulus_griseus_crigri
WBGene00004490rps-219467.470ENSCSEG00000008439rps219967.470Cynoglossus_semilaevis
WBGene00004490rps-219468.675ENSCVAG00000015564rps219968.675Cyprinodon_variegatus
WBGene00004490rps-219365.854ENSDARG00000025850rps2110065.854Danio_rerio
WBGene00004490rps-219356.098ENSDNOG00000044649-9356.098Dasypus_novemcinctus
WBGene00004490rps-219460.241ENSDNOG00000041135-9960.241Dasypus_novemcinctus
WBGene00004490rps-219467.470ENSDORG00000007632Rps219967.470Dipodomys_ordii
WBGene00004490rps-219469.880FBgn0015521RpS2110070.732Drosophila_melanogaster
WBGene00004490rps-217257.143ENSEBUG00000001679-5357.143Eptatretus_burgeri
WBGene00004490rps-218146.479ENSEASG00005011846-10046.479Equus_asinus_asinus
WBGene00004490rps-219467.470ENSEASG00005023207RPS219967.470Equus_asinus_asinus
WBGene00004490rps-218146.479ENSECAG00000026916-10046.479Equus_caballus
WBGene00004490rps-219467.470ENSECAG00000036116RPS219967.470Equus_caballus
WBGene00004490rps-219466.265ENSELUG00000018003rps217766.265Esox_lucius
WBGene00004490rps-219467.470ENSFCAG00000033393RPS219967.470Felis_catus
WBGene00004490rps-217856.522ENSFCAG00000036536-8456.522Felis_catus
WBGene00004490rps-218154.930ENSFCAG00000043440-10054.930Felis_catus
WBGene00004490rps-219368.293ENSFALG00000010558RPS2110068.293Ficedula_albicollis
WBGene00004490rps-217760.294ENSFDAG00000014783-9160.294Fukomys_damarensis
WBGene00004490rps-219467.470ENSFDAG00000004771RPS219967.470Fukomys_damarensis
WBGene00004490rps-219468.675ENSFHEG00000015890rps218068.675Fundulus_heteroclitus
WBGene00004490rps-219468.675ENSGALG00000005338RPS219968.675Gallus_gallus
WBGene00004490rps-218848.052ENSGAGG00000005056-8448.052Gopherus_agassizii
WBGene00004490rps-217268.254ENSGAGG00000023406-6068.254Gopherus_agassizii
WBGene00004490rps-219350.000ENSGGOG00000039503-9750.000Gorilla_gorilla
WBGene00004490rps-219467.470ENSGGOG00000023745-9967.470Gorilla_gorilla
WBGene00004490rps-219369.512ENSHBUG00000012656rps2110069.512Haplochromis_burtoni
WBGene00004490rps-219467.470ENSHGLG00000009268RPS219967.470Heterocephalus_glaber_female
WBGene00004490rps-219467.470ENSHGLG00100006306RPS219967.470Heterocephalus_glaber_male
WBGene00004490rps-219468.675ENSHCOG00000005285rps219968.675Hippocampus_comes
WBGene00004490rps-219465.060ENSIPUG00000005448rps219965.060Ictalurus_punctatus
WBGene00004490rps-219467.470ENSSTOG00000001029RPS219967.470Ictidomys_tridecemlineatus
WBGene00004490rps-219467.470ENSJJAG00000016454Rps219967.470Jaculus_jaculus
WBGene00004490rps-219467.470ENSKMAG00000008850rps219967.470Kryptolebias_marmoratus
WBGene00004490rps-219367.073ENSLBEG00000006007rps219867.073Labrus_bergylta
WBGene00004490rps-219465.060ENSLOCG00000005469rps219965.060Lepisosteus_oculatus
WBGene00004490rps-219467.470ENSLAFG00000015793RPS219967.470Loxodonta_africana
WBGene00004490rps-219467.470ENSMFAG00000002515RPS219967.470Macaca_fascicularis
WBGene00004490rps-215168.889ENSMMUG00000005006RPS217368.889Macaca_mulatta
WBGene00004490rps-219467.470ENSMNEG00000045270RPS219967.470Macaca_nemestrina
WBGene00004490rps-219467.470ENSMNEG00000028050-9967.470Macaca_nemestrina
WBGene00004490rps-219467.470ENSMLEG00000036605RPS2110068.293Mandrillus_leucophaeus
WBGene00004490rps-219466.265ENSMLEG00000037338-9966.265Mandrillus_leucophaeus
WBGene00004490rps-219368.293ENSMAMG00000007033rps2110068.293Mastacembelus_armatus
WBGene00004490rps-219468.675ENSMZEG00005026797rps219968.675Maylandia_zebra
WBGene00004490rps-219468.675ENSMGAG00000005698RPS219968.675Meleagris_gallopavo
WBGene00004490rps-219467.470ENSMAUG00000008499-9967.470Mesocricetus_auratus
WBGene00004490rps-219453.012ENSMAUG00000002182-9953.012Mesocricetus_auratus
WBGene00004490rps-219051.899ENSMAUG00000017869-9951.899Mesocricetus_auratus
WBGene00004490rps-219460.241ENSMAUG00000018663-9960.241Mesocricetus_auratus
WBGene00004490rps-219467.470ENSMAUG00000010991-9967.470Mesocricetus_auratus
WBGene00004490rps-219467.470ENSMICG00000046562RPS219967.470Microcebus_murinus
WBGene00004490rps-219465.116ENSMOCG00000001528-9965.116Microtus_ochrogaster
WBGene00004490rps-219467.470ENSMOCG00000021976-9967.470Microtus_ochrogaster
WBGene00004490rps-219157.500ENSMMOG00000010662rps219957.500Mola_mola
WBGene00004490rps-219467.470ENSMODG00000016769RPS217667.470Monodelphis_domestica
WBGene00004490rps-219370.732ENSMALG00000018350rps218570.732Monopterus_albus
WBGene00004490rps-219465.060ENSMUSG00000039001Rps219965.060Mus_musculus
WBGene00004490rps-219465.060MGP_PahariEiJ_G0026223Rps219965.060Mus_pahari
WBGene00004490rps-219465.060MGP_SPRETEiJ_G0025701Rps219965.060Mus_spretus
WBGene00004490rps-219448.193ENSMPUG00000018752-9948.193Mustela_putorius_furo
WBGene00004490rps-219467.470ENSMLUG00000000346RPS219967.470Myotis_lucifugus
WBGene00004490rps-219460.241ENSNGAG00000018260-9960.241Nannospalax_galili
WBGene00004490rps-219450.588ENSNGAG00000016079-9950.588Nannospalax_galili
WBGene00004490rps-219449.398ENSNGAG00000012211-9949.398Nannospalax_galili
WBGene00004490rps-219466.265ENSNGAG00000017987Rps219966.265Nannospalax_galili
WBGene00004490rps-219468.675ENSNBRG00000008784rps219968.675Neolamprologus_brichardi
WBGene00004490rps-219467.470ENSNLEG00000010894-9967.470Nomascus_leucogenys
WBGene00004490rps-215661.224ENSNLEG00000028252-6761.224Nomascus_leucogenys
WBGene00004490rps-219465.060ENSNLEG00000033725-9965.060Nomascus_leucogenys
WBGene00004490rps-216358.182ENSOPRG00000000937-6058.182Ochotona_princeps
WBGene00004490rps-219460.241ENSODEG00000012670-9960.241Octodon_degus
WBGene00004490rps-219461.446ENSODEG00000019866-9961.446Octodon_degus
WBGene00004490rps-219463.855ENSODEG00000020368-9963.855Octodon_degus
WBGene00004490rps-219467.470ENSODEG00000003715-9967.470Octodon_degus
WBGene00004490rps-219466.265ENSODEG00000019972-9966.265Octodon_degus
WBGene00004490rps-219454.217ENSODEG00000019239-9954.217Octodon_degus
WBGene00004490rps-219468.675ENSONIG00000014882rps219968.675Oreochromis_niloticus
WBGene00004490rps-219468.675ENSOANG00000003361RPS217768.675Ornithorhynchus_anatinus
WBGene00004490rps-219463.855ENSOCUG00000027307RPS219963.855Oryctolagus_cuniculus
WBGene00004490rps-219467.470ENSORLG00000019065rps219967.470Oryzias_latipes
WBGene00004490rps-219368.293ENSORLG00015020322rps2110068.293Oryzias_latipes_hsok
WBGene00004490rps-219467.470ENSOMEG00000013240rps219967.470Oryzias_melastigma
WBGene00004490rps-219467.470ENSOGAG00000016673RPS219967.470Otolemur_garnettii
WBGene00004490rps-219467.470ENSOARG00000013126RPS219967.470Ovis_aries
WBGene00004490rps-219467.470ENSPPAG00000043545-9967.470Pan_paniscus
WBGene00004490rps-219359.756ENSPPAG00000033323-9759.756Pan_paniscus
WBGene00004490rps-219456.627ENSPPRG00000004689-9956.627Panthera_pardus
WBGene00004490rps-218153.521ENSPPRG00000019730-10053.521Panthera_pardus
WBGene00004490rps-219455.422ENSPPRG00000014463-9955.422Panthera_pardus
WBGene00004490rps-219448.193ENSPPRG00000006972-9948.193Panthera_pardus
WBGene00004490rps-219455.422ENSPTIG00000006593-9955.422Panthera_tigris_altaica
WBGene00004490rps-215858.824ENSPTIG00000012625-9458.824Panthera_tigris_altaica
WBGene00004490rps-219449.398ENSPTIG00000009593-9949.398Panthera_tigris_altaica
WBGene00004490rps-219467.470ENSPTRG00000040730-9967.470Pan_troglodytes
WBGene00004490rps-219359.756ENSPTRG00000049952-9759.756Pan_troglodytes
WBGene00004490rps-219467.470ENSPTRG00000013708-9967.470Pan_troglodytes
WBGene00004490rps-219467.470ENSPANG00000021054RPS219967.470Papio_anubis
WBGene00004490rps-219367.073ENSPKIG00000018867rps2110067.073Paramormyrops_kingsleyae
WBGene00004490rps-219467.470ENSPSIG00000004333RPS219967.470Pelodiscus_sinensis
WBGene00004490rps-217266.667ENSPMGG00000019476rps216366.667Periophthalmus_magnuspinnatus
WBGene00004490rps-219364.634ENSPEMG00000001904-9264.634Peromyscus_maniculatus_bairdii
WBGene00004490rps-219460.241ENSPEMG00000014051-9960.241Peromyscus_maniculatus_bairdii
WBGene00004490rps-219467.470ENSPEMG00000012806-9967.470Peromyscus_maniculatus_bairdii
WBGene00004490rps-219365.854ENSPMAG00000006866-9865.854Petromyzon_marinus
WBGene00004490rps-219459.036ENSPCIG00000013466-8059.036Phascolarctos_cinereus
WBGene00004490rps-219368.293ENSPCIG00000013196-10068.293Phascolarctos_cinereus
WBGene00004490rps-218665.789ENSPCIG00000026022-10065.789Phascolarctos_cinereus
WBGene00004490rps-219469.880ENSPFOG00000012900rps219969.880Poecilia_formosa
WBGene00004490rps-219469.880ENSPLAG00000001546rps219969.880Poecilia_latipinna
WBGene00004490rps-219455.238ENSPMEG00000021868rps219955.238Poecilia_mexicana
WBGene00004490rps-219367.073ENSPREG00000020255rps2110067.073Poecilia_reticulata
WBGene00004490rps-219467.470ENSPPYG00000011205RPS219967.470Pongo_abelii
WBGene00004490rps-219054.430ENSPPYG00000012128-9954.430Pongo_abelii
WBGene00004490rps-219467.470ENSPCOG00000013052RPS219967.470Propithecus_coquereli
WBGene00004490rps-219468.675ENSPNYG00000023895rps219968.675Pundamilia_nyererei
WBGene00004490rps-219364.634ENSPNAG00000001329rps2110064.634Pygocentrus_nattereri
WBGene00004490rps-219463.855ENSRNOG00000033916AC141489.19963.855Rattus_norvegicus
WBGene00004490rps-219365.854ENSRNOG00000060449Rps2110065.854Rattus_norvegicus
WBGene00004490rps-219458.333ENSRNOG00000038864AC135409.19958.333Rattus_norvegicus
WBGene00004490rps-219467.470ENSRBIG00000023738RPS219967.470Rhinopithecus_bieti
WBGene00004490rps-219467.470ENSRROG00000038602RPS2110068.293Rhinopithecus_roxellana
WBGene00004490rps-219162.500YJL136CRPS21B9162.500Saccharomyces_cerevisiae
WBGene00004490rps-219162.500YKR057WRPS21A9162.500Saccharomyces_cerevisiae
WBGene00004490rps-219447.059ENSSBOG00000024835-9947.059Saimiri_boliviensis_boliviensis
WBGene00004490rps-219467.470ENSSBOG00000021410RPS219967.470Saimiri_boliviensis_boliviensis
WBGene00004490rps-219467.470ENSSHAG00000013595RPS219967.470Sarcophilus_harrisii
WBGene00004490rps-219167.500ENSSFOG00015016503-6367.500Scleropages_formosus
WBGene00004490rps-219364.634ENSSFOG00015020546rps2110064.634Scleropages_formosus
WBGene00004490rps-219368.293ENSSMAG00000017703rps219868.293Scophthalmus_maximus
WBGene00004490rps-219368.293ENSSDUG00000006621rps219868.293Seriola_dumerili
WBGene00004490rps-219368.293ENSSLDG00000001940rps219868.293Seriola_lalandi_dorsalis
WBGene00004490rps-218642.105ENSSLDG00000003458-9442.105Seriola_lalandi_dorsalis
WBGene00004490rps-219468.675ENSSPUG00000014739-9968.675Sphenodon_punctatus
WBGene00004490rps-219059.494ENSSPUG00000016661-8459.494Sphenodon_punctatus
WBGene00004490rps-219368.293ENSSPAG00000002110rps2110068.293Stegastes_partitus
WBGene00004490rps-219467.470ENSSSCG00000021825RPS219967.470Sus_scrofa
WBGene00004490rps-219467.470ENSSSCG00000002529-9967.470Sus_scrofa
WBGene00004490rps-219467.470ENSTRUG00000024759rps2110068.293Takifugu_rubripes
WBGene00004490rps-215160.000ENSTNIG00000019467rps218360.000Tetraodon_nigroviridis
WBGene00004490rps-217250.794ENSUAMG00000010905-5650.794Ursus_americanus
WBGene00004490rps-219460.241ENSUAMG00000028374-9960.241Ursus_americanus
WBGene00004490rps-217745.588ENSUAMG00000022840-7845.588Ursus_americanus
WBGene00004490rps-217249.206ENSUAMG00000009778-7549.206Ursus_americanus
WBGene00004490rps-215758.000ENSUAMG00000006972-9858.000Ursus_americanus
WBGene00004490rps-217249.206ENSUMAG00000002439-7549.206Ursus_maritimus
WBGene00004490rps-219461.446ENSUMAG00000019963-9961.446Ursus_maritimus
WBGene00004490rps-216843.333ENSUMAG00000023938-5843.333Ursus_maritimus
WBGene00004490rps-218156.338ENSUMAG00000015238-10056.338Ursus_maritimus
WBGene00004490rps-219345.122ENSVVUG00000029001-9845.122Vulpes_vulpes
WBGene00004490rps-219462.651ENSVVUG00000004473-8662.651Vulpes_vulpes
WBGene00004490rps-219456.627ENSVVUG00000023176-6956.627Vulpes_vulpes
WBGene00004490rps-219467.470ENSXETG00000002012rps219967.470Xenopus_tropicalis
WBGene00004490rps-219370.732ENSXCOG00000016853rps2110070.732Xiphophorus_couchianus
WBGene00004490rps-219469.880ENSXMAG00000025164rps2110070.732Xiphophorus_maculatus

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