EuRBPDB

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  • Description
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
WBGene00004503 (Gene tree)
Gene ID
-
Gene Symbol
rpt-3
Alias
-
Full Name
Probable 26S protease regulatory subunit 6B
Gene Type
protein_coding
Species
Caenorhabditis_elegans
Status
putative
Strand
Plus strand
Length
1490
Position
chrIII: 6489793-6491282
Accession
P46502
RBP type
non-canonical RBP
Summary
-
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
26595419Conserved mRNA binding proteomes in eukaryotic organismsmRBPome & elegans2015 Nov 23Matia-Gonzalez AMDOI: 10.1038/nsmb.3128
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
F23F12.6.2-1353NM_066028F23F12.6.2414 (aa)NP_498429P46502
F23F12.6.1-1355NM_066028F23F12.6.1414 (aa)NP_498429P46502
Gene Model
Click here to download WBGene00004503's gene model file
Protein-Protein Interaction (PPI)

Clik here to download WBGene00004503's network
Orthologs identified by RBPome
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
WBGene00004503rpt-38550.000WBGene00004502rpt-28649.474Caenorhabditis_elegans
WBGene00004503rpt-36452.612WBGene00004501rpt-16152.612Caenorhabditis_elegans
WBGene00004503rpt-38952.162ENSG00000100764PSMC19854.878Homo_sapiens
WBGene00004503rpt-39242.145ENSG00000165916PSMC39242.145Homo_sapiens
WBGene00004503rpt-37846.440ENSG00000087191PSMC59045.312Homo_sapiens
WBGene00004503rpt-38444.220ENSG00000100519PSMC69950.000Homo_sapiens
WBGene00004503rpt-36451.880ENSG00000161057PSMC26751.880Homo_sapiens
WBGene00004503rpt-39370.543YDR394WRPT39070.543Saccharomyces_cerevisiae
WBGene00004503rpt-38951.762YDL007WRPT28451.762Saccharomyces_cerevisiae
WBGene00004503rpt-38144.478YGL048CRPT68344.478Saccharomyces_cerevisiae
WBGene00004503rpt-36450.943YKL145WRPT15750.943Saccharomyces_cerevisiae

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