EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Description

Ensembl ID: WBGene00004862 (Gene tree)
Gene ID: -
Gene Symbol: sma-9
Alias: -
Full Name: SMA-9 class IIb%3B SMAll
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 13686 bases
Position: chrX:10769288-10782973
Accession: G5ED62
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
T05A10	zf-C2H2	PF00096.26	2.4e-17	1	2
T05A10	zf-C2H2	PF00096.26	2.4e-17	2	2
T05A10	zf-C2H2	PF00096.26	1.3e-16	1	2
T05A10	zf-C2H2	PF00096.26	1.3e-16	2	2
T05A10	zf-C2H2	PF00096.26	1.4e-16	1	2
T05A10	zf-C2H2	PF00096.26	1.4e-16	2	2
T05A10	zf-C2H2	PF00096.26	1.6e-16	1	2
T05A10	zf-C2H2	PF00096.26	1.6e-16	2	2
T05A10	zf-C2H2	PF00096.26	1.8e-16	1	2
T05A10	zf-C2H2	PF00096.26	1.8e-16	2	2
T05A10	zf-C2H2	PF00096.26	2.2e-16	1	2
T05A10	zf-C2H2	PF00096.26	2.2e-16	2	2
T05A10	zf-C2H2	PF00096.26	2.8e-16	1	2
T05A10	zf-C2H2	PF00096.26	2.8e-16	2	2
T05A10	zf-C2H2	PF00096.26	1.4e-14	1	2
T05A10	zf-C2H2	PF00096.26	1.4e-14	2	2
T05A10	zf-C2H2	PF00096.26	1.6e-14	1	2
T05A10	zf-C2H2	PF00096.26	1.6e-14	2	2
T05A10	zf-C2H2	PF00096.26	1.6e-14	1	2
T05A10	zf-C2H2	PF00096.26	1.6e-14	2	2
T05A10	zf-C2H2	PF00096.26	4.2e-11	1	3
T05A10	zf-C2H2	PF00096.26	4.2e-11	2	3
T05A10	zf-C2H2	PF00096.26	4.2e-11	3	3
T05A10	zf-C2H2	PF00096.26	2.7e-08	1	2
T05A10	zf-C2H2	PF00096.26	2.7e-08	2	2
T05A10	zf-met	PF12874.7	3.4e-09	1	2
T05A10	zf-met	PF12874.7	3.4e-09	2	2
T05A10	zf-met	PF12874.7	7.1e-09	1	2
T05A10	zf-met	PF12874.7	7.1e-09	2	2
T05A10	zf-met	PF12874.7	7.5e-09	1	2
T05A10	zf-met	PF12874.7	7.5e-09	2	2
T05A10	zf-met	PF12874.7	7.5e-09	1	2
T05A10	zf-met	PF12874.7	7.5e-09	2	2
T05A10	zf-met	PF12874.7	9.5e-09	1	2
T05A10	zf-met	PF12874.7	9.5e-09	2	2
T05A10	zf-met	PF12874.7	1.5e-08	1	2
T05A10	zf-met	PF12874.7	1.5e-08	2	2
T05A10	zf-met	PF12874.7	1.7e-08	1	2
T05A10	zf-met	PF12874.7	1.7e-08	2	2
T05A10	zf-met	PF12874.7	1.8e-08	1	2
T05A10	zf-met	PF12874.7	1.8e-08	2	2
T05A10	zf-met	PF12874.7	2e-08	1	2
T05A10	zf-met	PF12874.7	2e-08	2	2
T05A10	zf-met	PF12874.7	2.4e-08	1	2
T05A10	zf-met	PF12874.7	2.4e-08	2	2
T05A10	zf-met	PF12874.7	1.9e-06	1	2
T05A10	zf-met	PF12874.7	1.9e-06	2	2
T05A10	zf-met	PF12874.7	6.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
T05A10.1g.1	-	6005	NM_001029710	T05A10.1g.1	1888 (aa)	NP_001024881	Q7JM45
T05A10.1g.2	-	6729	NM_001029710	T05A10.1g.2	1888 (aa)	NP_001024881	Q7JM45
T05A10.1m	-	7292	NM_001136464	T05A10.1m	2232 (aa)	NP_001129936	B5U8M3
T05A10.1l	-	7109	NM_001029706	T05A10.1l	2173 (aa)	NP_001024877	B5U8M2
T05A10.1k	-	2093	NM_001047821	T05A10.1k	582 (aa)	NP_001041286	Q2L6U8
T05A10.1j	-	4530	NM_001029713	T05A10.1j	1509 (aa)	NP_001024884	Q7JM47
T05A10.1i	-	5784	NM_001029712	T05A10.1i	1927 (aa)	NP_001024883	Q7JM46
T05A10.1h	-	2775	-	T05A10.1h	537 (aa)	NP_001024882	G5ED62
T05A10.1f	-	6723	NM_001029709	T05A10.1f	2048 (aa)	NP_001024880	Q7JM42
T05A10.1e	-	6893	NM_001029708	T05A10.1e	2101 (aa)	NP_001024879	Q7JM43
T05A10.1d	-	6992	NM_001029706	T05A10.1d	2134 (aa)	NP_001024877	Q7JM44
T05A10.1c	-	5888	NM_001029706	T05A10.1c	1692 (aa)	NP_001024877	Q7JM48
T05A10.1b	-	2184	NM_171772	T05A10.1b	725 (aa)	NP_741897	Q6TPG6
T05A10.1a	-	6788	NM_171771	T05A10.1a	2066 (aa)	NP_741896	Q22190

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download WBGene00004862's network