EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
WBGene00004914 (Gene tree)
Gene ID
-
Gene Symbol
snr-1
Alias
-
Full Name
Small nuclear ribonucleoprotein Sm D3
Gene Type
protein_coding
Species
Caenorhabditis_elegans
Status
confidence
Strand
Plus strand
Length
777 bases
Position
chrIV:17088058-17088834
Accession
Q17348
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
Y116A8CLSMPF01423.225.5e-1511
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
26595419Conserved mRNA binding proteomes in eukaryotic organismsmRBPome & elegans2015 Nov 23Matia-Gonzalez AMDOI: 10.1038/nsmb.3128
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
Y116A8C.42-676-Y116A8C.42136 (aa)NP_503027Q17348
Gene Model
Click here to download WBGene00004914's gene model file
Protein-Protein Interaction (PPI)

Clik here to download WBGene00004914's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
WBGene00004914snr-18162.727ENSG00000100028SNRPD39872.131Homo_sapiens
WBGene00004914snr-16869.565ENSAPOG00000007512snrpd3l9461.600Acanthochromis_polyacanthus
WBGene00004914snr-16869.565ENSAMEG00000013935SNRPD39461.600Ailuropoda_melanoleuca
WBGene00004914snr-16869.565ENSACIG00000008871snrpd3l9461.600Amphilophus_citrinellus
WBGene00004914snr-16869.565ENSAOCG00000016743snrpd3l9461.600Amphiprion_ocellaris
WBGene00004914snr-16869.565ENSAOCG00000008497SNRPD39461.600Amphiprion_ocellaris
WBGene00004914snr-16869.565ENSAOCG00000022442-9461.600Amphiprion_ocellaris
WBGene00004914snr-16869.565ENSAOCG00000016759-8569.565Amphiprion_ocellaris
WBGene00004914snr-16869.565ENSAPEG00000006273snrpd3l9461.600Amphiprion_percula
WBGene00004914snr-16869.565ENSAPEG00000006260-8569.565Amphiprion_percula
WBGene00004914snr-18162.727ENSATEG00000020556snrpd3l8561.600Anabas_testudineus
WBGene00004914snr-16869.565ENSAPLG00000008670SNRPD39461.600Anas_platyrhynchos
WBGene00004914snr-18162.727ENSANAG00000026106SNRPD39461.600Aotus_nancymaae
WBGene00004914snr-16869.565ENSACLG00000021295snrpd3l9461.600Astatotilapia_calliptera
WBGene00004914snr-16374.118ENSAMXG00000038984snrpd3l8964.348Astyanax_mexicanus
WBGene00004914snr-16869.565ENSBTAG00000021262SNRPD39461.600Bos_taurus
WBGene00004914snr-18162.727ENSCJAG00000009630SNRPD39461.600Callithrix_jacchus
WBGene00004914snr-16868.478ENSCAFG00000017258-9460.800Canis_familiaris
WBGene00004914snr-16869.565ENSCAFG00000013864-9461.600Canis_familiaris
WBGene00004914snr-17350.485ENSCAFG00020024699-9750.485Canis_lupus_dingo
WBGene00004914snr-16869.565ENSCAFG00020007165-9461.600Canis_lupus_dingo
WBGene00004914snr-16869.565ENSCHIG00000000057SNRPD39461.600Capra_hircus
WBGene00004914snr-16869.565ENSTSYG00000007649SNRPD39461.600Carlito_syrichta
WBGene00004914snr-16869.565ENSCAPG00000016432-9461.600Cavia_aperea
WBGene00004914snr-16869.565ENSCPOG00000033102-9461.600Cavia_porcellus
WBGene00004914snr-16869.565ENSCCAG00000035006SNRPD39461.600Cebus_capucinus
WBGene00004914snr-16869.565ENSCATG00000038878SNRPD39461.600Cercocebus_atys
WBGene00004914snr-16869.565ENSCLAG00000011403SNRPD39461.600Chinchilla_lanigera
WBGene00004914snr-16869.565ENSCSAG00000010694SNRPD39461.600Chlorocebus_sabaeus
WBGene00004914snr-16869.565ENSCPBG00000002065SNRPD39461.600Chrysemys_picta_bellii
WBGene00004914snr-16769.231ENSCSAVG00000004708-9359.542Ciona_savignyi
WBGene00004914snr-16869.565ENSCANG00000032106SNRPD39461.600Colobus_angolensis_palliatus
WBGene00004914snr-16869.565ENSCGRG00001021990Snrpd39461.600Cricetulus_griseus_chok1gshd
WBGene00004914snr-16869.565ENSCGRG00000004280Snrpd39461.600Cricetulus_griseus_crigri
WBGene00004914snr-16869.565ENSCVAG00000001276snrpd3l9063.478Cyprinodon_variegatus
WBGene00004914snr-16374.118ENSDARG00000076283snrpd3l9462.400Danio_rerio
WBGene00004914snr-16375.294ENSDARG00000013800snrpd39064.348Danio_rerio
WBGene00004914snr-15958.750ENSDNOG00000042638-6658.750Dasypus_novemcinctus
WBGene00004914snr-16863.158ENSDNOG00000018004-7363.158Dasypus_novemcinctus
WBGene00004914snr-16869.565ENSDNOG00000047424-9461.600Dasypus_novemcinctus
WBGene00004914snr-18750.806ENSDORG00000027706-9450.806Dipodomys_ordii
WBGene00004914snr-15758.974ENSDORG00000027169-8950.000Dipodomys_ordii
WBGene00004914snr-15761.039ENSDORG00000002800-9053.535Dipodomys_ordii
WBGene00004914snr-18264.286FBgn0023167SmD38561.314Drosophila_melanogaster
WBGene00004914snr-16869.565ENSEASG00005000273SNRPD39461.600Equus_asinus_asinus
WBGene00004914snr-16869.565ENSECAG00000023316SNRPD39461.600Equus_caballus
WBGene00004914snr-16869.565ENSEEUG00000015518SNRPD39357.600Erinaceus_europaeus
WBGene00004914snr-16869.565ENSELUG00000010092snrpd3l9063.478Esox_lucius
WBGene00004914snr-16375.294ENSELUG00000001854snrpd39463.200Esox_lucius
WBGene00004914snr-16869.565ENSFCAG00000001512SNRPD39461.600Felis_catus
WBGene00004914snr-16869.565ENSFALG00000007303SNRPD39461.600Ficedula_albicollis
WBGene00004914snr-16869.565ENSFDAG00000010772SNRPD39461.600Fukomys_damarensis
WBGene00004914snr-16869.565ENSFHEG00000010754snrpd3l9063.478Fundulus_heteroclitus
WBGene00004914snr-16868.817ENSGMOG00000008469snrpd3l9461.111Gadus_morhua
WBGene00004914snr-16869.565ENSGALG00000006596SNRPD39461.600Gallus_gallus
WBGene00004914snr-18162.727ENSGAFG00000006661snrpd3l7662.727Gambusia_affinis
WBGene00004914snr-16868.817ENSGACG00000017533snrpd3l9461.111Gasterosteus_aculeatus
WBGene00004914snr-16869.565ENSGAGG00000023325SNRPD39461.600Gopherus_agassizii
WBGene00004914snr-16869.565ENSGGOG00000015640SNRPD39461.600Gorilla_gorilla
WBGene00004914snr-16869.565ENSHBUG00000001332snrpd3l9461.600Haplochromis_burtoni
WBGene00004914snr-18160.000ENSHGLG00000009844-9060.870Heterocephalus_glaber_female
WBGene00004914snr-16869.565ENSHGLG00000016496SNRPD39461.600Heterocephalus_glaber_female
WBGene00004914snr-18160.000ENSHGLG00100011326-9060.870Heterocephalus_glaber_male
WBGene00004914snr-16869.565ENSHGLG00100019304SNRPD39461.600Heterocephalus_glaber_male
WBGene00004914snr-16869.565ENSHCOG00000014396snrpd3l9461.600Hippocampus_comes
WBGene00004914snr-16374.118ENSIPUG00000003083snrpd39462.400Ictalurus_punctatus
WBGene00004914snr-16869.565ENSSTOG00000025674SNRPD39461.600Ictidomys_tridecemlineatus
WBGene00004914snr-16869.565ENSJJAG00000013303Snrpd39461.600Jaculus_jaculus
WBGene00004914snr-16869.565ENSKMAG00000012493snrpd3l9063.478Kryptolebias_marmoratus
WBGene00004914snr-16869.565ENSLBEG00000003202snrpd3l9461.600Labrus_bergylta
WBGene00004914snr-16869.565ENSLACG00000015192SNRPD39461.600Latimeria_chalumnae
WBGene00004914snr-18162.727ENSLOCG00000006978snrpd39461.600Lepisosteus_oculatus
WBGene00004914snr-16869.565ENSLAFG00000028180SNRPD39461.600Loxodonta_africana
WBGene00004914snr-16869.565ENSMFAG00000033628SNRPD39461.600Macaca_fascicularis
WBGene00004914snr-16869.565ENSMMUG00000000264SNRPD39461.600Macaca_mulatta
WBGene00004914snr-16869.565ENSMNEG00000020857SNRPD39461.600Macaca_nemestrina
WBGene00004914snr-18162.727ENSMLEG00000037548SNRPD39461.600Mandrillus_leucophaeus
WBGene00004914snr-16869.565ENSMZEG00005017664snrpd3l9461.600Maylandia_zebra
WBGene00004914snr-16869.565ENSMAUG00000021393Snrpd39461.600Mesocricetus_auratus
WBGene00004914snr-16869.565ENSMICG00000034782SNRPD39461.600Microcebus_murinus
WBGene00004914snr-16869.565ENSMOCG00000009361Snrpd39461.600Microtus_ochrogaster
WBGene00004914snr-19059.524ENSMMOG00000020985snrpd3l7959.524Mola_mola
WBGene00004914snr-16869.565ENSMODG00000004024SNRPD39461.600Monodelphis_domestica
WBGene00004914snr-16869.565ENSMALG00000013334snrpd3l9461.600Monopterus_albus
WBGene00004914snr-16869.565MGP_CAROLIEiJ_G0015441Snrpd39461.600Mus_caroli
WBGene00004914snr-16869.565ENSMUSG00000020180Snrpd39461.600Mus_musculus
WBGene00004914snr-16869.565MGP_PahariEiJ_G0030857Snrpd39461.600Mus_pahari
WBGene00004914snr-16869.565MGP_SPRETEiJ_G0016254Snrpd39461.600Mus_spretus
WBGene00004914snr-16869.565ENSMPUG00000002889SNRPD39461.600Mustela_putorius_furo
WBGene00004914snr-16869.565ENSMLUG00000009838SNRPD39461.600Myotis_lucifugus
WBGene00004914snr-16869.565ENSNGAG00000010328Snrpd39461.600Nannospalax_galili
WBGene00004914snr-16869.565ENSNBRG00000020307snrpd3l9461.600Neolamprologus_brichardi
WBGene00004914snr-16869.565ENSNLEG00000035757SNRPD39461.600Nomascus_leucogenys
WBGene00004914snr-16869.565ENSMEUG00000003772SNRPD39461.600Notamacropus_eugenii
WBGene00004914snr-16869.565ENSOPRG00000005763SNRPD39461.600Ochotona_princeps
WBGene00004914snr-18161.818ENSODEG00000019354-9460.800Octodon_degus
WBGene00004914snr-17463.000ENSODEG00000020162-9459.350Octodon_degus
WBGene00004914snr-16869.565ENSODEG00000008064-9461.600Octodon_degus
WBGene00004914snr-16869.565ENSONIG00000003828snrpd3l9461.600Oreochromis_niloticus
WBGene00004914snr-16869.565ENSOANG00000002463SNRPD39461.600Ornithorhynchus_anatinus
WBGene00004914snr-16869.565ENSOCUG00000004845SNRPD39461.600Oryctolagus_cuniculus
WBGene00004914snr-16869.565ENSORLG00000010586snrpd3l9461.600Oryzias_latipes
WBGene00004914snr-16869.565ENSORLG00020011769snrpd3l9461.600Oryzias_latipes_hni
WBGene00004914snr-16869.565ENSORLG00015022940snrpd3l9461.600Oryzias_latipes_hsok
WBGene00004914snr-19756.061ENSOMEG00000022734snrpd3l9063.478Oryzias_melastigma
WBGene00004914snr-18162.727ENSOGAG00000012708SNRPD39461.600Otolemur_garnettii
WBGene00004914snr-16869.565ENSOARG00000013984SNRPD39461.600Ovis_aries
WBGene00004914snr-16869.565ENSPPAG00000039191SNRPD39461.600Pan_paniscus
WBGene00004914snr-16869.565ENSPPRG00000001470SNRPD39461.600Panthera_pardus
WBGene00004914snr-16869.565ENSPTIG00000016610SNRPD39461.600Panthera_tigris_altaica
WBGene00004914snr-16869.565ENSPTRG00000014176SNRPD39461.600Pan_troglodytes
WBGene00004914snr-18162.727ENSPANG00000009279SNRPD39461.600Papio_anubis
WBGene00004914snr-16870.652ENSPKIG00000006412snrpd3l9064.348Paramormyrops_kingsleyae
WBGene00004914snr-16867.391ENSPSIG00000010022-9460.000Pelodiscus_sinensis
WBGene00004914snr-16869.565ENSPMGG00000004486snrpd3l9264.035Periophthalmus_magnuspinnatus
WBGene00004914snr-16869.565ENSPCIG00000010910SNRPD37961.600Phascolarctos_cinereus
WBGene00004914snr-16869.565ENSPFOG00000019673snrpd3l9063.478Poecilia_formosa
WBGene00004914snr-16869.565ENSPLAG00000023249snrpd3l9063.478Poecilia_latipinna
WBGene00004914snr-16869.565ENSPMEG00000008482snrpd3l9063.478Poecilia_mexicana
WBGene00004914snr-18361.207ENSPREG00000007532snrpd3l9461.207Poecilia_reticulata
WBGene00004914snr-16869.565ENSPPYG00000011648SNRPD39461.600Pongo_abelii
WBGene00004914snr-16869.565ENSPCAG00000002065SNRPD39461.600Procavia_capensis
WBGene00004914snr-16869.565ENSPCOG00000011842SNRPD39461.600Propithecus_coquereli
WBGene00004914snr-16869.565ENSPVAG00000011405SNRPD39461.600Pteropus_vampyrus
WBGene00004914snr-16869.565ENSPNYG00000013344snrpd3l9461.600Pundamilia_nyererei
WBGene00004914snr-16374.118ENSPNAG00000008683snrpd3l8964.348Pygocentrus_nattereri
WBGene00004914snr-16375.294ENSPNAG00000010547snrpd39064.348Pygocentrus_nattereri
WBGene00004914snr-16869.565ENSRNOG00000050410Snrpd39461.600Rattus_norvegicus
WBGene00004914snr-16869.565ENSRBIG00000029017SNRPD39461.600Rhinopithecus_bieti
WBGene00004914snr-16869.565ENSRROG00000031152SNRPD39461.600Rhinopithecus_roxellana
WBGene00004914snr-16351.765YLR147CSMD38451.765Saccharomyces_cerevisiae
WBGene00004914snr-16870.652ENSSFOG00015014180snrpd3l9462.400Scleropages_formosus
WBGene00004914snr-16374.118ENSSFOG00015007002snrpd3l9064.348Scleropages_formosus
WBGene00004914snr-16869.565ENSSMAG00000019307snrpd3l9461.600Scophthalmus_maximus
WBGene00004914snr-16869.565ENSSDUG00000006870snrpd3l9461.600Seriola_dumerili
WBGene00004914snr-16869.565ENSSLDG00000022664snrpd3l9461.600Seriola_lalandi_dorsalis
WBGene00004914snr-16869.565ENSSARG00000002357SNRPD39461.600Sorex_araneus
WBGene00004914snr-16869.565ENSSPUG00000014285SNRPD39461.600Sphenodon_punctatus
WBGene00004914snr-16869.565ENSSSCG00000010058SNRPD39461.600Sus_scrofa
WBGene00004914snr-16869.565ENSTGUG00000010079SNRPD39461.600Taeniopygia_guttata
WBGene00004914snr-16869.565ENSTRUG00000023976snrpd3l7869.565Takifugu_rubripes
WBGene00004914snr-16869.565ENSTNIG00000005323snrpd3l9063.478Tetraodon_nigroviridis
WBGene00004914snr-16869.565ENSTBEG00000014334SNRPD39461.600Tupaia_belangeri
WBGene00004914snr-16869.565ENSTTRG00000006022SNRPD39461.600Tursiops_truncatus
WBGene00004914snr-16869.565ENSUAMG00000010767SNRPD39461.600Ursus_americanus
WBGene00004914snr-16869.565ENSUMAG00000001670SNRPD39461.600Ursus_maritimus
WBGene00004914snr-16869.565ENSVPAG00000000241SNRPD39461.600Vicugna_pacos
WBGene00004914snr-17662.500ENSXETG00000024918snrpd39458.140Xenopus_tropicalis
WBGene00004914snr-16869.565ENSXCOG00000004795snrpd3l9063.478Xiphophorus_couchianus
WBGene00004914snr-16869.565ENSXMAG00000001133snrpd3l9063.478Xiphophorus_maculatus

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