EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00004920 (Gene tree)
Gene ID: -
Gene Symbol: snr-7
Alias: -
Full Name: Probable small nuclear ribonucleoprotein G
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: confidence
Strand: Plus strand
Length: 532 bases
Position: chrI:2727014-2727545
Accession: Q9N4G9
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
Y71F9B	LSM	PF01423.22	5.6e-22	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
Y71F9B.4	-	479	-	Y71F9B.4	77 (aa)	NP_491032	Q9N4G9

Gene Model

Click here to download WBGene00004920's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00004920's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00004920	snr-7	87	36.000	WBGene00003081	lsm-7	72	36.000
WBGene00004920	snr-7	81	34.848	WBGene00003082	lsm-8	67	34.848

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00004920	snr-7	91	52.055	YFL017W-A	SMX2	95	52.055	Saccharomyces_cerevisiae
WBGene00004920	snr-7	83	53.125	ENSSLDG00000004364	-	88	53.125	Seriola_lalandi_dorsalis