EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00005015 (Gene tree)
Gene ID: -
Gene Symbol: spt-5
Alias: -
Full Name: Transcription elongation factor SPT5
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 4302 bases
Position: chrIV:12051484-12055785
Accession: Q21338
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
K08E4	KOW	PF00467.29	6.2e-17	1	1
K08E4	KOW	PF00467.29	6.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
K08E4.1.1	-	3875	NM_069882	K08E4.1.1	1208 (aa)	NP_502283	Q21338
K08E4.1.2	-	3829	NM_069882	K08E4.1.2	1208 (aa)	NP_502283	Q21338

Gene Model

Click here to download WBGene00005015's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00005015's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00005015	spt-5	90	39.495	ENSG00000196235	SUPT5H	88	39.347	Homo_sapiens
WBGene00005015	spt-5	89	36.078	ENSAPOG00000012970	supt5h	92	36.397	Acanthochromis_polyacanthus
WBGene00005015	spt-5	88	39.778	ENSAMEG00000008382	SUPT5H	88	39.908	Ailuropoda_melanoleuca
WBGene00005015	spt-5	74	46.599	ENSACIG00000021245	supt5h	87	47.331	Amphilophus_citrinellus
WBGene00005015	spt-5	89	38.725	ENSAOCG00000001136	supt5h	91	38.262	Amphiprion_ocellaris
WBGene00005015	spt-5	86	38.086	ENSAPEG00000021060	supt5h	89	38.682	Amphiprion_percula
WBGene00005015	spt-5	90	38.669	ENSATEG00000002626	supt5h	93	39.062	Anabas_testudineus
WBGene00005015	spt-5	90	38.978	ENSACAG00000000375	SUPT5H	91	38.825	Anolis_carolinensis
WBGene00005015	spt-5	90	39.405	ENSANAG00000033469	SUPT5H	89	39.347	Aotus_nancymaae
WBGene00005015	spt-5	92	36.704	ENSACLG00000011374	supt5h	89	37.776	Astatotilapia_calliptera
WBGene00005015	spt-5	90	39.497	ENSAMXG00000009128	supt5h	91	39.593	Astyanax_mexicanus
WBGene00005015	spt-5	90	39.495	ENSBTAG00000010467	SUPT5H	88	39.166	Bos_taurus
WBGene00005015	spt-5	90	39.604	ENSCJAG00000014182	SUPT5H	89	38.998	Callithrix_jacchus
WBGene00005015	spt-5	90	39.495	ENSCAFG00000005469	SUPT5H	88	39.347	Canis_familiaris
WBGene00005015	spt-5	98	36.371	ENSCAFG00020015732	SUPT5H	95	39.115	Canis_lupus_dingo
WBGene00005015	spt-5	97	37.870	ENSCHIG00000023821	SUPT5H	91	39.166	Capra_hircus
WBGene00005015	spt-5	88	39.870	ENSTSYG00000010636	SUPT5H	88	39.146	Carlito_syrichta
WBGene00005015	spt-5	90	37.689	ENSCAPG00000008285	SUPT5H	90	39.447	Cavia_aperea
WBGene00005015	spt-5	90	39.585	ENSCPOG00000011367	SUPT5H	88	39.166	Cavia_porcellus
WBGene00005015	spt-5	90	39.405	ENSCCAG00000034052	SUPT5H	89	38.630	Cebus_capucinus
WBGene00005015	spt-5	90	39.495	ENSCATG00000035589	SUPT5H	90	39.455	Cercocebus_atys
WBGene00005015	spt-5	90	39.585	ENSCLAG00000013796	SUPT5H	88	39.166	Chinchilla_lanigera
WBGene00005015	spt-5	90	39.495	ENSCSAG00000003826	SUPT5H	88	39.347	Chlorocebus_sabaeus
WBGene00005015	spt-5	88	39.614	ENSCPBG00000018792	SUPT5H	99	40.174	Chrysemys_picta_bellii
WBGene00005015	spt-5	85	41.031	ENSCING00000021624	-	89	40.019	Ciona_intestinalis
WBGene00005015	spt-5	96	41.684	ENSCSAVG00000000030	-	90	46.547	Ciona_savignyi
WBGene00005015	spt-5	90	39.495	ENSCANG00000043752	SUPT5H	91	39.455	Colobus_angolensis_palliatus
WBGene00005015	spt-5	90	39.856	ENSCGRG00001012522	Supt5	88	39.452	Cricetulus_griseus_chok1gshd
WBGene00005015	spt-5	90	39.856	ENSCGRG00000006779	Supt5	90	38.948	Cricetulus_griseus_crigri
WBGene00005015	spt-5	63	42.194	ENSCSEG00000017151	-	92	41.580	Cynoglossus_semilaevis
WBGene00005015	spt-5	94	35.608	ENSCSEG00000015699	supt5h	93	36.774	Cynoglossus_semilaevis
WBGene00005015	spt-5	90	39.315	ENSCVAG00000007501	supt5h	90	38.638	Cyprinodon_variegatus
WBGene00005015	spt-5	90	39.196	ENSDARG00000042724	supt5h	91	39.027	Danio_rerio
WBGene00005015	spt-5	85	40.307	ENSDNOG00000033920	SUPT5H	88	39.236	Dasypus_novemcinctus
WBGene00005015	spt-5	88	42.746	ENSDORG00000016582	Supt5	88	38.200	Dipodomys_ordii
WBGene00005015	spt-5	91	42.694	FBgn0040273	Spt5	87	37.534	Drosophila_melanogaster
WBGene00005015	spt-5	89	37.500	ENSEBUG00000011892	supt5h	99	36.397	Eptatretus_burgeri
WBGene00005015	spt-5	92	39.362	ENSEASG00005011861	SUPT5H	96	39.201	Equus_asinus_asinus
WBGene00005015	spt-5	97	38.188	ENSECAG00000013309	SUPT5H	99	39.207	Equus_caballus
WBGene00005015	spt-5	85	39.365	ENSEEUG00000012879	SUPT5H	86	38.432	Erinaceus_europaeus
WBGene00005015	spt-5	90	38.994	ENSELUG00000011402	supt5h	95	38.818	Esox_lucius
WBGene00005015	spt-5	90	39.495	ENSFCAG00000010744	SUPT5H	88	39.347	Felis_catus
WBGene00005015	spt-5	90	39.405	ENSFDAG00000015803	SUPT5H	88	38.579	Fukomys_damarensis
WBGene00005015	spt-5	90	39.241	ENSFHEG00000012497	supt5h	93	38.830	Fundulus_heteroclitus
WBGene00005015	spt-5	72	46.988	ENSGMOG00000003422	supt5h	81	46.374	Gadus_morhua
WBGene00005015	spt-5	91	35.231	ENSGACG00000004934	supt5h	81	46.520	Gasterosteus_aculeatus
WBGene00005015	spt-5	89	39.488	ENSGAGG00000019112	SUPT5H	99	40.351	Gopherus_agassizii
WBGene00005015	spt-5	90	39.495	ENSGGOG00000014425	SUPT5H	89	39.510	Gorilla_gorilla
WBGene00005015	spt-5	92	37.228	ENSHBUG00000017144	supt5h	90	38.584	Haplochromis_burtoni
WBGene00005015	spt-5	90	39.405	ENSHGLG00000018339	SUPT5H	88	39.798	Heterocephalus_glaber_female
WBGene00005015	spt-5	88	42.354	ENSHGLG00100017126	SUPT5H	88	39.450	Heterocephalus_glaber_male
WBGene00005015	spt-5	90	38.489	ENSHCOG00000004932	supt5h	91	37.961	Hippocampus_comes
WBGene00005015	spt-5	90	39.173	ENSIPUG00000007308	supt5h	93	39.265	Ictalurus_punctatus
WBGene00005015	spt-5	90	39.495	ENSSTOG00000026638	SUPT5H	88	39.543	Ictidomys_tridecemlineatus
WBGene00005015	spt-5	90	39.134	ENSJJAG00000022374	Supt5	88	39.452	Jaculus_jaculus
WBGene00005015	spt-5	89	38.653	ENSKMAG00000004401	supt5h	92	38.559	Kryptolebias_marmoratus
WBGene00005015	spt-5	91	38.759	ENSLACG00000008663	SUPT5H	88	39.367	Latimeria_chalumnae
WBGene00005015	spt-5	53	48.165	ENSLOCG00000014703	SUPT5H	80	47.793	Lepisosteus_oculatus
WBGene00005015	spt-5	90	37.343	ENSLAFG00000027736	SUPT5H	88	37.982	Loxodonta_africana
WBGene00005015	spt-5	90	39.495	ENSMFAG00000038707	SUPT5H	89	39.600	Macaca_fascicularis
WBGene00005015	spt-5	90	39.495	ENSMMUG00000019372	SUPT5H	88	39.347	Macaca_mulatta
WBGene00005015	spt-5	90	39.495	ENSMNEG00000041553	SUPT5H	90	39.455	Macaca_nemestrina
WBGene00005015	spt-5	90	39.495	ENSMLEG00000036432	SUPT5H	92	39.455	Mandrillus_leucophaeus
WBGene00005015	spt-5	90	38.849	ENSMAMG00000019715	supt5h	93	37.893	Mastacembelus_armatus
WBGene00005015	spt-5	92	36.530	ENSMZEG00005024864	supt5h	90	38.584	Maylandia_zebra
WBGene00005015	spt-5	90	39.785	ENSMGAG00000012449	SUPT5H	88	39.636	Meleagris_gallopavo
WBGene00005015	spt-5	88	43.547	ENSMAUG00000009006	Supt5	88	38.695	Mesocricetus_auratus
WBGene00005015	spt-5	90	40.036	ENSMICG00000006115	SUPT5H	90	39.529	Microcebus_murinus
WBGene00005015	spt-5	90	39.495	ENSMOCG00000012211	Supt5	88	39.452	Microtus_ochrogaster
WBGene00005015	spt-5	89	38.454	ENSMMOG00000009770	supt5h	92	39.411	Mola_mola
WBGene00005015	spt-5	82	39.482	ENSMODG00000013570	SUPT5H	87	39.204	Monodelphis_domestica
WBGene00005015	spt-5	90	38.810	ENSMALG00000017833	supt5h	92	37.968	Monopterus_albus
WBGene00005015	spt-5	90	39.388	MGP_CAROLIEiJ_G0029441	Supt5	88	39.490	Mus_caroli
WBGene00005015	spt-5	90	39.388	ENSMUSG00000003435	Supt5	88	39.490	Mus_musculus
WBGene00005015	spt-5	90	39.568	MGP_PahariEiJ_G0012677	Supt5	88	39.672	Mus_pahari
WBGene00005015	spt-5	90	39.388	MGP_SPRETEiJ_G0030539	Supt5	88	39.490	Mus_spretus
WBGene00005015	spt-5	90	39.495	ENSMPUG00000017721	SUPT5H	88	39.347	Mustela_putorius_furo
WBGene00005015	spt-5	88	39.685	ENSMLUG00000013886	-	88	39.166	Myotis_lucifugus
WBGene00005015	spt-5	88	38.519	ENSMLUG00000008079	-	89	37.659	Myotis_lucifugus
WBGene00005015	spt-5	90	40.000	ENSNGAG00000022458	Supt5	88	39.510	Nannospalax_galili
WBGene00005015	spt-5	76	36.315	ENSNBRG00000005030	supt5h	66	36.451	Neolamprologus_brichardi
WBGene00005015	spt-5	88	38.725	ENSNLEG00000014365	SUPT5H	90	38.225	Nomascus_leucogenys
WBGene00005015	spt-5	88	44.340	ENSMEUG00000016423	SUPT5H	92	45.213	Notamacropus_eugenii
WBGene00005015	spt-5	85	39.408	ENSOPRG00000016844	SUPT5H	88	38.795	Ochotona_princeps
WBGene00005015	spt-5	90	39.495	ENSODEG00000016445	SUPT5H	88	39.372	Octodon_degus
WBGene00005015	spt-5	90	38.663	ENSONIG00000001100	supt5h	90	38.584	Oreochromis_niloticus
WBGene00005015	spt-5	63	47.036	ENSOANG00000008175	SUPT5H	86	45.352	Ornithorhynchus_anatinus
WBGene00005015	spt-5	90	39.353	ENSOCUG00000002155	SUPT5H	88	39.816	Oryctolagus_cuniculus
WBGene00005015	spt-5	90	38.632	ENSORLG00000000394	supt5h	90	38.584	Oryzias_latipes
WBGene00005015	spt-5	90	38.721	ENSORLG00020021680	supt5h	90	38.584	Oryzias_latipes_hni
WBGene00005015	spt-5	90	38.721	ENSORLG00015010686	supt5h	90	38.584	Oryzias_latipes_hsok
WBGene00005015	spt-5	90	39.748	ENSOGAG00000033979	SUPT5H	88	39.383	Otolemur_garnettii
WBGene00005015	spt-5	90	39.820	ENSOARG00000006174	SUPT5H	88	39.438	Ovis_aries
WBGene00005015	spt-5	90	39.495	ENSPPAG00000040180	SUPT5H	89	39.510	Pan_paniscus
WBGene00005015	spt-5	90	39.405	ENSPPRG00000009686	SUPT5H	88	39.257	Panthera_pardus
WBGene00005015	spt-5	90	39.495	ENSPTIG00000011633	SUPT5H	88	39.347	Panthera_tigris_altaica
WBGene00005015	spt-5	90	39.495	ENSPTRG00000010971	SUPT5H	89	39.510	Pan_troglodytes
WBGene00005015	spt-5	90	39.495	ENSPANG00000007383	SUPT5H	90	39.322	Papio_anubis
WBGene00005015	spt-5	90	38.814	ENSPKIG00000006261	supt5h	95	37.838	Paramormyrops_kingsleyae
WBGene00005015	spt-5	90	37.823	ENSPSIG00000014117	SUPT5H	91	37.098	Pelodiscus_sinensis
WBGene00005015	spt-5	84	38.762	ENSPMGG00000020581	supt5h	90	38.725	Periophthalmus_magnuspinnatus
WBGene00005015	spt-5	88	43.049	ENSPEMG00000015730	Supt5	88	39.452	Peromyscus_maniculatus_bairdii
WBGene00005015	spt-5	89	39.234	ENSPMAG00000006913	supt5h	88	38.899	Petromyzon_marinus
WBGene00005015	spt-5	88	39.834	ENSPCIG00000010477	SUPT5H	88	39.631	Phascolarctos_cinereus
WBGene00005015	spt-5	84	39.903	ENSPFOG00000011126	supt5h	90	38.962	Poecilia_formosa
WBGene00005015	spt-5	90	39.350	ENSPLAG00000013092	supt5h	90	38.638	Poecilia_latipinna
WBGene00005015	spt-5	84	40.252	ENSPMEG00000020479	supt5h	88	39.564	Poecilia_mexicana
WBGene00005015	spt-5	90	39.562	ENSPREG00000006712	supt5h	90	38.779	Poecilia_reticulata
WBGene00005015	spt-5	90	39.671	ENSPPYG00000009968	SUPT5H	91	38.864	Pongo_abelii
WBGene00005015	spt-5	88	34.569	ENSPCAG00000010830	SUPT5H	87	34.242	Procavia_capensis
WBGene00005015	spt-5	95	38.132	ENSPCOG00000021231	SUPT5H	91	39.383	Propithecus_coquereli
WBGene00005015	spt-5	61	49.608	ENSPVAG00000011129	SUPT5H	60	51.037	Pteropus_vampyrus
WBGene00005015	spt-5	92	36.530	ENSPNYG00000009203	supt5h	89	37.684	Pundamilia_nyererei
WBGene00005015	spt-5	90	36.937	ENSPNAG00000010925	supt5h	92	47.432	Pygocentrus_nattereri
WBGene00005015	spt-5	90	37.835	ENSRNOG00000032034	Supt5h	99	31.278	Rattus_norvegicus
WBGene00005015	spt-5	92	38.992	ENSRBIG00000039828	SUPT5H	90	39.455	Rhinopithecus_bieti
WBGene00005015	spt-5	90	39.495	ENSRROG00000019625	SUPT5H	89	39.098	Rhinopithecus_roxellana
WBGene00005015	spt-5	90	39.405	ENSSBOG00000022657	SUPT5H	89	39.347	Saimiri_boliviensis_boliviensis
WBGene00005015	spt-5	88	37.638	ENSSHAG00000009504	SUPT5H	97	37.534	Sarcophilus_harrisii
WBGene00005015	spt-5	90	38.994	ENSSFOG00015005973	supt5h	90	39.007	Scleropages_formosus
WBGene00005015	spt-5	90	36.208	ENSSMAG00000004503	supt5h	88	40.209	Scophthalmus_maximus
WBGene00005015	spt-5	90	38.774	ENSSDUG00000014520	supt5h	90	38.584	Seriola_dumerili
WBGene00005015	spt-5	90	38.774	ENSSLDG00000008112	supt5h	95	38.198	Seriola_lalandi_dorsalis
WBGene00005015	spt-5	88	37.408	ENSSPUG00000011434	SUPT5H	93	37.054	Sphenodon_punctatus
WBGene00005015	spt-5	90	38.018	ENSSPAG00000010429	supt5h	90	38.407	Stegastes_partitus
WBGene00005015	spt-5	97	37.690	ENSSSCG00000023556	SUPT5H	92	38.399	Sus_scrofa
WBGene00005015	spt-5	90	38.742	ENSTRUG00000002370	supt5h	90	39.103	Takifugu_rubripes
WBGene00005015	spt-5	90	39.044	ENSTNIG00000011178	supt5h	91	39.235	Tetraodon_nigroviridis
WBGene00005015	spt-5	52	41.941	ENSTBEG00000017617	SUPT5H	85	41.900	Tupaia_belangeri
WBGene00005015	spt-5	88	39.870	ENSTTRG00000003573	SUPT5H	88	39.347	Tursiops_truncatus
WBGene00005015	spt-5	90	39.495	ENSUAMG00000020014	SUPT5H	90	39.111	Ursus_americanus
WBGene00005015	spt-5	90	39.495	ENSUMAG00000019558	SUPT5H	93	38.761	Ursus_maritimus
WBGene00005015	spt-5	88	39.870	ENSVVUG00000006193	SUPT5H	91	39.201	Vulpes_vulpes
WBGene00005015	spt-5	89	40.018	ENSXETG00000002888	supt5h	89	39.257	Xenopus_tropicalis
WBGene00005015	spt-5	88	38.995	ENSXMAG00000004169	supt5h	88	38.944	Xiphophorus_maculatus