EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00006321 (Gene tree)
Gene ID: -
Gene Symbol: sup-12
Alias: -
Full Name: SUPpressor
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 3081 bases
Position: chrX:3904591-3907671
Accession: H2L051
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
T22B2	RRM_1	PF00076.22	3.3e-18	1	1
T22B2	RRM_1	PF00076.22	9.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
T22B2.4b	-	521	NM_001136466	T22B2.4b	151 (aa)	NP_001129938	H2L051
T22B2.4a	-	1275	-	T22B2.4a	248 (aa)	NP_508674	O45189

Gene Model

Click here to download WBGene00006321's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00006321's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00006321	sup-12	96	34.211	WBGene00003423	msi-1	66	34.211
WBGene00006321	sup-12	50	35.526	WBGene00011156	R09B3.3	89	35.526
WBGene00006321	sup-12	51	33.333	WBGene00004701	rsp-4	62	33.333
WBGene00006321	sup-12	67	32.000	WBGene00022235	sqd-1	55	32.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00006321	sup-12	59	85.393	ENSG00000132819	RBM38	74	85.393	Homo_sapiens
WBGene00006321	sup-12	68	71.569	ENSAPOG00000003301	rbm38	58	59.310	Acanthochromis_polyacanthus
WBGene00006321	sup-12	59	83.146	ENSAPOG00000009939	-	54	65.385	Acanthochromis_polyacanthus
WBGene00006321	sup-12	59	83.146	ENSACIG00000012502	-	76	83.146	Amphilophus_citrinellus
WBGene00006321	sup-12	59	79.775	ENSACIG00000000010	rbm38	57	60.284	Amphilophus_citrinellus
WBGene00006321	sup-12	68	71.569	ENSAOCG00000013497	-	58	59.310	Amphiprion_ocellaris
WBGene00006321	sup-12	59	83.146	ENSAOCG00000012559	RBM38	50	65.385	Amphiprion_ocellaris
WBGene00006321	sup-12	77	63.780	ENSAPEG00000013137	rbm38	63	59.310	Amphiprion_percula
WBGene00006321	sup-12	77	63.780	ENSATEG00000016366	rbm38	63	59.310	Anabas_testudineus
WBGene00006321	sup-12	59	85.393	ENSANAG00000031959	RBM38	74	85.393	Aotus_nancymaae
WBGene00006321	sup-12	63	78.947	ENSACLG00000019514	-	52	63.566	Astatotilapia_calliptera
WBGene00006321	sup-12	91	60.135	ENSAMXG00000038120	rbm38	57	63.910	Astyanax_mexicanus
WBGene00006321	sup-12	77	66.142	ENSAMXG00000015601	-	55	66.154	Astyanax_mexicanus
WBGene00006321	sup-12	59	84.270	ENSBTAG00000008105	RBM38	50	69.048	Bos_taurus
WBGene00006321	sup-12	59	85.393	ENSCJAG00000019139	RBM38	74	85.393	Callithrix_jacchus
WBGene00006321	sup-12	59	84.270	ENSCAFG00020021943	RBM38	58	60.870	Canis_lupus_dingo
WBGene00006321	sup-12	59	84.270	ENSCHIG00000002609	RBM38	54	64.615	Capra_hircus
WBGene00006321	sup-12	59	85.393	ENSCPOG00000012781	RBM38	58	62.319	Cavia_porcellus
WBGene00006321	sup-12	59	85.393	ENSCCAG00000036872	RBM38	74	85.393	Cebus_capucinus
WBGene00006321	sup-12	59	85.393	ENSCATG00000032133	RBM38	74	85.393	Cercocebus_atys
WBGene00006321	sup-12	59	85.393	ENSCLAG00000005906	RBM38	60	62.319	Chinchilla_lanigera
WBGene00006321	sup-12	59	85.393	ENSCSAG00000015503	RBM38	84	50.500	Chlorocebus_sabaeus
WBGene00006321	sup-12	59	85.393	ENSCPBG00000024059	RBM38	60	66.154	Chrysemys_picta_bellii
WBGene00006321	sup-12	57	69.767	ENSCANG00000030105	-	73	45.263	Colobus_angolensis_palliatus
WBGene00006321	sup-12	59	82.022	ENSCSEG00000004701	-	74	55.618	Cynoglossus_semilaevis
WBGene00006321	sup-12	81	61.240	ENSCSEG00000020943	rbm38	53	50.299	Cynoglossus_semilaevis
WBGene00006321	sup-12	78	72.269	ENSCVAG00000015952	rbm38	60	61.842	Cyprinodon_variegatus
WBGene00006321	sup-12	62	79.787	ENSCVAG00000005472	-	53	66.923	Cyprinodon_variegatus
WBGene00006321	sup-12	58	80.682	ENSEBUG00000015164	rbm38	54	80.682	Eptatretus_burgeri
WBGene00006321	sup-12	59	83.146	ENSEEUG00000013489	RBM38	58	60.145	Erinaceus_europaeus
WBGene00006321	sup-12	59	82.022	ENSELUG00000005849	-	59	61.972	Esox_lucius
WBGene00006321	sup-12	75	68.421	ENSELUG00000000585	-	51	68.421	Esox_lucius
WBGene00006321	sup-12	59	84.270	ENSFCAG00000042916	RBM38	74	84.270	Felis_catus
WBGene00006321	sup-12	59	85.393	ENSFALG00000010805	RBM38	68	66.154	Ficedula_albicollis
WBGene00006321	sup-12	78	70.339	ENSFHEG00000017748	rbm38	60	59.333	Fundulus_heteroclitus
WBGene00006321	sup-12	77	66.929	ENSGMOG00000016655	-	73	65.185	Gadus_morhua
WBGene00006321	sup-12	59	85.393	ENSGALG00000026081	RBM38	60	66.154	Gallus_gallus
WBGene00006321	sup-12	68	71.569	ENSGACG00000015224	rbm38	82	50.521	Gasterosteus_aculeatus
WBGene00006321	sup-12	59	78.652	ENSGACG00000009873	-	56	62.602	Gasterosteus_aculeatus
WBGene00006321	sup-12	59	85.393	ENSGAGG00000001187	RBM38	60	66.154	Gopherus_agassizii
WBGene00006321	sup-12	68	71.569	ENSHBUG00000012058	rbm38	61	59.310	Haplochromis_burtoni
WBGene00006321	sup-12	63	78.947	ENSHBUG00000011778	-	55	63.566	Haplochromis_burtoni
WBGene00006321	sup-12	59	80.899	ENSIPUG00000019349	-	55	65.385	Ictalurus_punctatus
WBGene00006321	sup-12	73	72.727	ENSLBEG00000016163	RBM38	57	65.116	Labrus_bergylta
WBGene00006321	sup-12	68	71.569	ENSLBEG00000018878	rbm38	58	56.849	Labrus_bergylta
WBGene00006321	sup-12	59	83.146	ENSLOCG00000003456	rbm38	57	66.154	Lepisosteus_oculatus
WBGene00006321	sup-12	59	85.393	ENSMFAG00000043808	RBM38	74	85.393	Macaca_fascicularis
WBGene00006321	sup-12	59	85.393	ENSMMUG00000031391	RBM38	74	85.393	Macaca_mulatta
WBGene00006321	sup-12	59	85.393	ENSMNEG00000034683	RBM38	74	85.393	Macaca_nemestrina
WBGene00006321	sup-12	59	69.663	ENSMLEG00000043261	-	72	69.663	Mandrillus_leucophaeus
WBGene00006321	sup-12	59	83.146	ENSMAMG00000020499	RBM38	57	58.278	Mastacembelus_armatus
WBGene00006321	sup-12	77	63.780	ENSMAMG00000024135	rbm38	58	59.310	Mastacembelus_armatus
WBGene00006321	sup-12	68	71.569	ENSMZEG00005026036	rbm38	58	59.310	Maylandia_zebra
WBGene00006321	sup-12	63	78.947	ENSMZEG00005000849	-	55	63.566	Maylandia_zebra
WBGene00006321	sup-12	59	85.393	ENSMICG00000038011	RBM38	64	61.594	Microcebus_murinus
WBGene00006321	sup-12	70	67.925	ENSMALG00000022327	rbm38	63	56.552	Monopterus_albus
WBGene00006321	sup-12	59	84.270	MGP_CAROLIEiJ_G0024745	Rbm38	55	79.070	Mus_caroli
WBGene00006321	sup-12	59	84.270	ENSMUSG00000027510	Rbm38	55	79.070	Mus_musculus
WBGene00006321	sup-12	59	84.270	MGP_PahariEiJ_G0026186	Rbm38	55	79.070	Mus_pahari
WBGene00006321	sup-12	59	84.270	MGP_SPRETEiJ_G0025665	Rbm38	55	79.070	Mus_spretus
WBGene00006321	sup-12	59	84.270	ENSMPUG00000006518	RBM38	68	60.870	Mustela_putorius_furo
WBGene00006321	sup-12	59	83.146	ENSMLUG00000011140	RBM38	64	60.145	Myotis_lucifugus
WBGene00006321	sup-12	63	78.947	ENSNBRG00000022545	-	52	63.566	Neolamprologus_brichardi
WBGene00006321	sup-12	68	72.549	ENSNBRG00000022685	rbm38	60	60.000	Neolamprologus_brichardi
WBGene00006321	sup-12	59	78.652	ENSMEUG00000005475	-	66	76.404	Notamacropus_eugenii
WBGene00006321	sup-12	59	85.393	ENSODEG00000007980	RBM38	58	62.319	Octodon_degus
WBGene00006321	sup-12	63	78.947	ENSONIG00000020324	-	53	63.566	Oreochromis_niloticus
WBGene00006321	sup-12	68	71.569	ENSONIG00000017073	rbm38	59	59.310	Oreochromis_niloticus
WBGene00006321	sup-12	80	66.942	ENSORLG00000027180	-	79	51.196	Oryzias_latipes
WBGene00006321	sup-12	80	66.942	ENSORLG00020020751	-	79	51.196	Oryzias_latipes_hni
WBGene00006321	sup-12	80	66.942	ENSORLG00015017040	-	73	53.968	Oryzias_latipes_hsok
WBGene00006321	sup-12	90	64.234	ENSORLG00015012606	rbm38	54	66.154	Oryzias_latipes_hsok
WBGene00006321	sup-12	77	67.241	ENSOMEG00000006805	rbm38	58	58.904	Oryzias_melastigma
WBGene00006321	sup-12	63	78.947	ENSOMEG00000023912	-	56	64.706	Oryzias_melastigma
WBGene00006321	sup-12	59	85.393	ENSOGAG00000029136	RBM38	58	61.594	Otolemur_garnettii
WBGene00006321	sup-12	59	84.270	ENSPPRG00000009507	RBM38	74	84.270	Panthera_pardus
WBGene00006321	sup-12	59	85.393	ENSPTRG00000013661	RBM38	74	85.393	Pan_troglodytes
WBGene00006321	sup-12	59	85.393	ENSPTRG00000045845	-	67	68.992	Pan_troglodytes
WBGene00006321	sup-12	59	85.393	ENSPANG00000020919	-	74	85.393	Papio_anubis
WBGene00006321	sup-12	59	83.146	ENSPKIG00000018122	-	76	83.146	Paramormyrops_kingsleyae
WBGene00006321	sup-12	59	85.393	ENSPKIG00000025417	rbm38	53	67.939	Paramormyrops_kingsleyae
WBGene00006321	sup-12	59	84.270	ENSPSIG00000011649	RBM38	56	65.385	Pelodiscus_sinensis
WBGene00006321	sup-12	59	85.393	ENSPCIG00000013648	RBM38	56	67.692	Phascolarctos_cinereus
WBGene00006321	sup-12	78	71.429	ENSPFOG00000011658	rbm38	59	61.184	Poecilia_formosa
WBGene00006321	sup-12	78	71.429	ENSPLAG00000005218	rbm38	59	61.184	Poecilia_latipinna
WBGene00006321	sup-12	62	79.787	ENSPLAG00000002500	-	53	66.923	Poecilia_latipinna
WBGene00006321	sup-12	78	71.429	ENSPMEG00000015770	rbm38	59	61.184	Poecilia_mexicana
WBGene00006321	sup-12	78	70.588	ENSPREG00000007398	rbm38	59	60.526	Poecilia_reticulata
WBGene00006321	sup-12	59	85.393	ENSPCOG00000026201	RBM38	73	85.393	Propithecus_coquereli
WBGene00006321	sup-12	57	80.233	ENSPNYG00000021373	rbm38	61	58.621	Pundamilia_nyererei
WBGene00006321	sup-12	59	83.146	ENSPNYG00000019727	-	76	83.146	Pundamilia_nyererei
WBGene00006321	sup-12	59	82.022	ENSPNAG00000015123	-	69	82.022	Pygocentrus_nattereri
WBGene00006321	sup-12	60	81.319	ENSPNAG00000010596	rbm38	72	53.933	Pygocentrus_nattereri
WBGene00006321	sup-12	59	74.157	ENSRROG00000036388	-	68	50.769	Rhinopithecus_roxellana
WBGene00006321	sup-12	59	85.393	ENSSBOG00000031053	RBM38	83	85.393	Saimiri_boliviensis_boliviensis
WBGene00006321	sup-12	65	77.551	ENSSFOG00015004453	rbm38	59	63.309	Scleropages_formosus
WBGene00006321	sup-12	68	71.569	ENSSDUG00000022611	rbm38	58	59.310	Seriola_dumerili
WBGene00006321	sup-12	77	63.780	ENSSLDG00000010845	rbm38	63	59.310	Seriola_lalandi_dorsalis
WBGene00006321	sup-12	63	78.947	ENSSPAG00000020989	RBM38	57	63.235	Stegastes_partitus
WBGene00006321	sup-12	77	63.780	ENSSPAG00000011113	rbm38	58	59.310	Stegastes_partitus
WBGene00006321	sup-12	59	84.270	ENSSSCG00000007504	RBM38	58	60.870	Sus_scrofa
WBGene00006321	sup-12	73	70.270	ENSTRUG00000024954	rbm38	59	59.310	Takifugu_rubripes
WBGene00006321	sup-12	59	84.270	ENSUAMG00000019780	RBM38	58	60.870	Ursus_americanus
WBGene00006321	sup-12	59	84.270	ENSVVUG00000017246	RBM38	58	60.870	Vulpes_vulpes
WBGene00006321	sup-12	79	67.200	ENSXETG00000011268	rbm38	76	54.054	Xenopus_tropicalis
WBGene00006321	sup-12	82	65.625	ENSXCOG00000017324	-	60	62.774	Xiphophorus_couchianus
WBGene00006321	sup-12	78	69.492	ENSXMAG00000023662	rbm38	60	59.603	Xiphophorus_maculatus