EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00006367 (Gene tree)
Gene ID: -
Gene Symbol: sym-2
Alias: -
Full Name: RNA-binding protein sym-2
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 9967 bases
Position: chrII:9178514-9188480
Accession: Q22708
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ZK1067	RRM_1	PF00076.22	1.6e-17	1	1
ZK1067	RRM_1	PF00076.22	3.1e-15	1	1
ZK1067	RRM_1	PF00076.22	3.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ZK1067.6b.2	-	1409	NM_001313679	ZK1067.6b.2	346 (aa)	NP_001300608	A0A0K3ARR9
ZK1067.6b.1	-	1759	-	ZK1067.6b.1	346 (aa)	-	A0A0K3ARR9
ZK1067.6a	-	2375	NM_063559	ZK1067.6a	618 (aa)	NP_495960	Q22708

Gene Model

Click here to download WBGene00006367's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00006367's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00006367	sym-2	58	39.326	WBGene00020936	hrpf-1	58	39.326

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00006367	sym-2	72	38.086	ENSCING00000019169	-	62	38.710	Ciona_intestinalis
WBGene00006367	sym-2	71	41.897	ENSCSAVG00000002057	-	68	48.494	Ciona_savignyi