EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00006617 (Gene tree)
Gene ID: -
Gene Symbol: tars-1
Alias: -
Full Name: Threonine--tRNA ligase%2C cytoplasmic
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 4332 bases
Position: chrII:11691326-11695657
Accession: P52709
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
C47D12	tRNA_SAD	PF07973.14	5.5e-12	1	1
C47D12	tRNA_SAD	PF07973.14	5.5e-12	1	1
C47D12	tRNA_SAD	PF07973.14	5.5e-12	1	1
C47D12	tRNA_SAD	PF07973.14	6e-12	1	1
C47D12	HGTP_anticodon	PF03129.20	2.3e-18	1	1
C47D12	HGTP_anticodon	PF03129.20	2.3e-18	1	1
C47D12	HGTP_anticodon	PF03129.20	2.3e-18	1	1
C47D12	HGTP_anticodon	PF03129.20	2.5e-18	1	1
C47D12	tRNA-synt_2b	PF00587.25	1.7e-36	1	1
C47D12	tRNA-synt_2b	PF00587.25	1.7e-36	1	1
C47D12	tRNA-synt_2b	PF00587.25	1.7e-36	1	1
C47D12	tRNA-synt_2b	PF00587.25	1.9e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
C47D12.6b.1	-	2379	NM_001026863	C47D12.6b.1	684 (aa)	NP_001022034	Q86D21
C47D12.6b.2	-	2293	NM_001026863	C47D12.6b.2	684 (aa)	NP_001022034	Q86D21
C47D12.6b.3	-	2278	NM_001026863	C47D12.6b.3	684 (aa)	NP_001022034	Q86D21
C47D12.6a	-	2428	NM_001026862	C47D12.6a	725 (aa)	NP_001022033	P52709

Gene Model

Click here to download WBGene00006617's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00006617's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00006617	tars-1	97	62.334	ENSCSAVG00000003985	-	97	63.806	Ciona_savignyi
WBGene00006617	tars-1	98	66.418	FBgn0027081	ThrRS	97	66.418	Drosophila_melanogaster
WBGene00006617	tars-1	98	55.058	YIL078W	THS1	94	55.058	Saccharomyces_cerevisiae