EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00006626 (Gene tree)
Gene ID: -
Gene Symbol: tsn-1
Alias: -
Full Name: Tudor Staphylococcal Nuclease homolog
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 3232 bases
Position: chrII:4706821-4710052
Accession: Q19328
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F10G7	TUDOR	PF00567.24	3.9e-27	1	1
F10G7	SNase	PF00565.17	3.8e-71	1	5
F10G7	SNase	PF00565.17	3.8e-71	2	5
F10G7	SNase	PF00565.17	3.8e-71	3	5
F10G7	SNase	PF00565.17	3.8e-71	4	5
F10G7	SNase	PF00565.17	3.8e-71	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F10G7.2	-	3046	NM_062438	F10G7.2	914 (aa)	NP_494839	Q19328

Gene Model

Click here to download WBGene00006626's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00006626's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00006626	tsn-1	98	47.149	ENSG00000197157	SND1	93	58.784	Homo_sapiens
WBGene00006626	tsn-1	99	46.939	ENSAPOG00000017599	snd1	99	46.939	Acanthochromis_polyacanthus
WBGene00006626	tsn-1	98	46.878	ENSAMEG00000004664	SND1	92	46.280	Ailuropoda_melanoleuca
WBGene00006626	tsn-1	97	46.374	ENSACIG00000003551	snd1	99	45.838	Amphilophus_citrinellus
WBGene00006626	tsn-1	99	47.154	ENSAOCG00000014166	snd1	99	47.154	Amphiprion_ocellaris
WBGene00006626	tsn-1	99	47.046	ENSAPEG00000007067	snd1	99	47.046	Amphiprion_percula
WBGene00006626	tsn-1	98	46.507	ENSATEG00000018475	snd1	89	46.179	Anabas_testudineus
WBGene00006626	tsn-1	98	47.091	ENSANAG00000034463	SND1	99	45.991	Aotus_nancymaae
WBGene00006626	tsn-1	99	47.065	ENSACLG00000022897	snd1	99	46.595	Astatotilapia_calliptera
WBGene00006626	tsn-1	99	46.788	ENSAMXG00000016318	snd1	99	46.467	Astyanax_mexicanus
WBGene00006626	tsn-1	98	46.981	ENSBTAG00000010692	SND1	98	46.711	Bos_taurus
WBGene00006626	tsn-1	98	47.311	ENSCJAG00000017668	SND1	98	46.872	Callithrix_jacchus
WBGene00006626	tsn-1	98	46.762	ENSCAFG00000001700	SND1	98	46.601	Canis_familiaris
WBGene00006626	tsn-1	98	46.762	ENSCAFG00020021639	SND1	98	46.601	Canis_lupus_dingo
WBGene00006626	tsn-1	98	47.091	ENSCHIG00000023390	SND1	98	46.889	Capra_hircus
WBGene00006626	tsn-1	75	51.993	ENSTSYG00000004979	SND1	96	51.993	Carlito_syrichta
WBGene00006626	tsn-1	98	43.013	ENSCAPG00000010677	SND1	97	42.904	Cavia_aperea
WBGene00006626	tsn-1	98	47.091	ENSCPOG00000006251	SND1	98	46.652	Cavia_porcellus
WBGene00006626	tsn-1	98	47.311	ENSCCAG00000036847	SND1	99	46.214	Cebus_capucinus
WBGene00006626	tsn-1	98	47.368	ENSCATG00000035214	SND1	99	46.837	Cercocebus_atys
WBGene00006626	tsn-1	98	47.530	ENSCLAG00000011796	SND1	98	51.656	Chinchilla_lanigera
WBGene00006626	tsn-1	98	47.368	ENSCSAG00000010182	SND1	98	46.930	Chlorocebus_sabaeus
WBGene00006626	tsn-1	77	39.216	ENSCHOG00000002218	SND1	86	39.216	Choloepus_hoffmanni
WBGene00006626	tsn-1	99	46.238	ENSCPBG00000018094	SND1	99	46.355	Chrysemys_picta_bellii
WBGene00006626	tsn-1	97	44.989	ENSCING00000000524	-	98	44.731	Ciona_intestinalis
WBGene00006626	tsn-1	99	44.660	ENSCSAVG00000008807	-	98	44.660	Ciona_savignyi
WBGene00006626	tsn-1	98	47.368	ENSCANG00000035119	SND1	98	46.930	Colobus_angolensis_palliatus
WBGene00006626	tsn-1	98	46.872	ENSCGRG00001022514	Snd1	98	50.741	Cricetulus_griseus_chok1gshd
WBGene00006626	tsn-1	97	46.719	ENSCGRG00000012277	Snd1	99	46.607	Cricetulus_griseus_crigri
WBGene00006626	tsn-1	98	47.052	ENSCSEG00000008661	snd1	98	47.072	Cynoglossus_semilaevis
WBGene00006626	tsn-1	99	47.351	ENSCVAG00000010316	snd1	99	47.027	Cyprinodon_variegatus
WBGene00006626	tsn-1	99	46.121	ENSDARG00000006766	snd1	99	48.780	Danio_rerio
WBGene00006626	tsn-1	97	46.726	ENSDNOG00000006795	SND1	99	46.282	Dasypus_novemcinctus
WBGene00006626	tsn-1	98	47.311	ENSDORG00000000336	Snd1	98	46.872	Dipodomys_ordii
WBGene00006626	tsn-1	99	47.091	FBgn0035121	Tudor-SN	99	46.915	Drosophila_melanogaster
WBGene00006626	tsn-1	86	39.326	ENSETEG00000000375	SND1	88	39.326	Echinops_telfairi
WBGene00006626	tsn-1	98	46.703	ENSEASG00005008513	SND1	98	46.270	Equus_asinus_asinus
WBGene00006626	tsn-1	98	47.201	ENSECAG00000011451	SND1	98	46.762	Equus_caballus
WBGene00006626	tsn-1	95	51.190	ENSEEUG00000014737	SND1	85	51.190	Erinaceus_europaeus
WBGene00006626	tsn-1	98	46.270	ENSELUG00000001805	snd1	95	46.270	Esox_lucius
WBGene00006626	tsn-1	98	47.420	ENSFCAG00000008289	SND1	98	46.981	Felis_catus
WBGene00006626	tsn-1	98	47.415	ENSFDAG00000015881	SND1	98	46.820	Fukomys_damarensis
WBGene00006626	tsn-1	99	46.512	ENSFHEG00000004093	snd1	99	47.176	Fundulus_heteroclitus
WBGene00006626	tsn-1	62	41.713	ENSGMOG00000018932	snd1	64	40.608	Gadus_morhua
WBGene00006626	tsn-1	99	46.724	ENSGAFG00000008421	snd1	99	47.170	Gambusia_affinis
WBGene00006626	tsn-1	99	31.562	ENSGACG00000019793	snd1	99	31.562	Gasterosteus_aculeatus
WBGene00006626	tsn-1	98	47.368	ENSGGOG00000009614	SND1	99	46.347	Gorilla_gorilla
WBGene00006626	tsn-1	99	46.963	ENSHBUG00000019135	snd1	99	46.638	Haplochromis_burtoni
WBGene00006626	tsn-1	98	47.311	ENSHGLG00000003618	SND1	95	51.952	Heterocephalus_glaber_female
WBGene00006626	tsn-1	99	47.027	ENSHGLG00100012449	SND1	99	46.595	Heterocephalus_glaber_male
WBGene00006626	tsn-1	99	46.818	ENSHCOG00000005266	snd1	99	46.602	Hippocampus_comes
WBGene00006626	tsn-1	98	47.552	ENSIPUG00000013279	snd1	98	47.225	Ictalurus_punctatus
WBGene00006626	tsn-1	98	47.311	ENSSTOG00000002140	SND1	98	46.711	Ictidomys_tridecemlineatus
WBGene00006626	tsn-1	98	47.420	ENSJJAG00000009561	Snd1	98	46.820	Jaculus_jaculus
WBGene00006626	tsn-1	99	47.368	ENSKMAG00000016997	snd1	99	47.368	Kryptolebias_marmoratus
WBGene00006626	tsn-1	99	50.331	ENSLBEG00000013563	snd1	99	50.331	Labrus_bergylta
WBGene00006626	tsn-1	97	47.495	ENSLOCG00000015537	snd1	98	46.581	Lepisosteus_oculatus
WBGene00006626	tsn-1	98	47.091	ENSLAFG00000009696	SND1	98	46.652	Loxodonta_africana
WBGene00006626	tsn-1	98	47.368	ENSMFAG00000038114	SND1	99	46.837	Macaca_fascicularis
WBGene00006626	tsn-1	98	47.368	ENSMMUG00000015432	SND1	95	52.048	Macaca_mulatta
WBGene00006626	tsn-1	98	47.368	ENSMNEG00000039808	SND1	97	51.916	Macaca_nemestrina
WBGene00006626	tsn-1	98	47.149	ENSMLEG00000029040	SND1	97	51.916	Mandrillus_leucophaeus
WBGene00006626	tsn-1	99	47.742	ENSMAMG00000011739	snd1	99	47.419	Mastacembelus_armatus
WBGene00006626	tsn-1	99	47.065	ENSMZEG00005005681	snd1	99	46.595	Maylandia_zebra
WBGene00006626	tsn-1	98	47.259	ENSMICG00000000097	SND1	98	46.820	Microcebus_murinus
WBGene00006626	tsn-1	98	47.091	ENSMOCG00000005040	Snd1	98	46.652	Microtus_ochrogaster
WBGene00006626	tsn-1	99	46.595	ENSMMOG00000001795	snd1	99	46.595	Mola_mola
WBGene00006626	tsn-1	98	46.872	ENSMODG00000015182	SND1	98	46.542	Monodelphis_domestica
WBGene00006626	tsn-1	99	47.568	ENSMALG00000012071	snd1	99	47.243	Monopterus_albus
WBGene00006626	tsn-1	98	46.865	MGP_CAROLIEiJ_G0028159	Snd1	98	51.777	Mus_caroli
WBGene00006626	tsn-1	98	46.865	ENSMUSG00000001424	Snd1	98	51.490	Mus_musculus
WBGene00006626	tsn-1	98	46.865	MGP_PahariEiJ_G0021917	Snd1	98	51.777	Mus_pahari
WBGene00006626	tsn-1	98	46.865	MGP_SPRETEiJ_G0029159	Snd1	98	51.490	Mus_spretus
WBGene00006626	tsn-1	98	47.091	ENSMPUG00000006545	SND1	98	47.091	Mustela_putorius_furo
WBGene00006626	tsn-1	97	46.476	ENSMLUG00000017130	SND1	99	46.366	Myotis_lucifugus
WBGene00006626	tsn-1	98	47.201	ENSNGAG00000011186	Snd1	98	46.762	Nannospalax_galili
WBGene00006626	tsn-1	99	47.174	ENSNBRG00000006681	snd1	99	46.703	Neolamprologus_brichardi
WBGene00006626	tsn-1	98	47.368	ENSNLEG00000012263	SND1	97	52.041	Nomascus_leucogenys
WBGene00006626	tsn-1	87	44.704	ENSOPRG00000013405	SND1	87	44.458	Ochotona_princeps
WBGene00006626	tsn-1	98	47.530	ENSODEG00000011502	SND1	98	46.930	Octodon_degus
WBGene00006626	tsn-1	99	46.957	ENSONIG00000011481	snd1	96	46.630	Oreochromis_niloticus
WBGene00006626	tsn-1	97	46.179	ENSOANG00000000817	SND1	97	45.985	Ornithorhynchus_anatinus
WBGene00006626	tsn-1	98	47.162	ENSOCUG00000001620	SND1	98	46.565	Oryctolagus_cuniculus
WBGene00006626	tsn-1	97	47.195	ENSORLG00000015201	snd1	99	46.659	Oryzias_latipes
WBGene00006626	tsn-1	97	47.305	ENSORLG00020013991	snd1	99	46.767	Oryzias_latipes_hni
WBGene00006626	tsn-1	97	47.305	ENSORLG00015012436	snd1	99	46.767	Oryzias_latipes_hsok
WBGene00006626	tsn-1	99	47.568	ENSOMEG00000006406	snd1	99	47.243	Oryzias_melastigma
WBGene00006626	tsn-1	98	47.265	ENSOGAG00000013356	SND1	94	46.417	Otolemur_garnettii
WBGene00006626	tsn-1	97	45.273	ENSOARG00000002149	SND1	99	45.161	Ovis_aries
WBGene00006626	tsn-1	99	46.514	ENSPPAG00000042947	SND1	98	46.820	Pan_paniscus
WBGene00006626	tsn-1	98	47.420	ENSPPRG00000004494	SND1	98	46.981	Panthera_pardus
WBGene00006626	tsn-1	98	47.530	ENSPTIG00000014214	SND1	98	47.091	Panthera_tigris_altaica
WBGene00006626	tsn-1	99	46.514	ENSPTRG00000023911	SND1	98	46.820	Pan_troglodytes
WBGene00006626	tsn-1	97	47.281	ENSPANG00000011997	SND1	99	46.837	Papio_anubis
WBGene00006626	tsn-1	97	45.464	ENSPKIG00000023494	snd1	98	45.307	Paramormyrops_kingsleyae
WBGene00006626	tsn-1	92	47.203	ENSPMGG00000003629	snd1	100	46.970	Periophthalmus_magnuspinnatus
WBGene00006626	tsn-1	98	46.762	ENSPEMG00000010240	Snd1	98	46.652	Peromyscus_maniculatus_bairdii
WBGene00006626	tsn-1	97	46.409	ENSPMAG00000007915	-	99	46.188	Petromyzon_marinus
WBGene00006626	tsn-1	98	46.432	ENSPCIG00000011561	SND1	98	45.993	Phascolarctos_cinereus
WBGene00006626	tsn-1	99	46.559	ENSPFOG00000001557	snd1	99	46.452	Poecilia_formosa
WBGene00006626	tsn-1	99	46.559	ENSPLAG00000018459	snd1	96	46.452	Poecilia_latipinna
WBGene00006626	tsn-1	99	46.882	ENSPMEG00000006803	snd1	99	46.774	Poecilia_mexicana
WBGene00006626	tsn-1	99	47.186	ENSPREG00000002189	snd1	99	47.186	Poecilia_reticulata
WBGene00006626	tsn-1	87	49.507	ENSPPYG00000017972	SND1	94	49.015	Pongo_abelii
WBGene00006626	tsn-1	98	40.944	ENSPCAG00000011305	SND1	98	40.944	Procavia_capensis
WBGene00006626	tsn-1	98	47.259	ENSPCOG00000026791	SND1	95	50.990	Propithecus_coquereli
WBGene00006626	tsn-1	98	46.103	ENSPVAG00000013945	SND1	98	45.504	Pteropus_vampyrus
WBGene00006626	tsn-1	99	47.065	ENSPNYG00000000932	snd1	98	46.739	Pundamilia_nyererei
WBGene00006626	tsn-1	99	47.789	ENSPNAG00000001206	snd1	99	47.465	Pygocentrus_nattereri
WBGene00006626	tsn-1	98	47.085	ENSRNOG00000031173	Snd1	99	45.727	Rattus_norvegicus
WBGene00006626	tsn-1	75	51.487	ENSRBIG00000027782	-	93	51.220	Rhinopithecus_bieti
WBGene00006626	tsn-1	99	46.710	ENSRROG00000033020	SND1	98	46.930	Rhinopithecus_roxellana
WBGene00006626	tsn-1	98	47.201	ENSSBOG00000032461	SND1	95	51.607	Saimiri_boliviensis_boliviensis
WBGene00006626	tsn-1	97	45.736	ENSSHAG00000015359	SND1	99	45.293	Sarcophilus_harrisii
WBGene00006626	tsn-1	97	47.650	ENSSFOG00015001103	snd1	99	47.009	Scleropages_formosus
WBGene00006626	tsn-1	99	45.926	ENSSMAG00000001932	snd1	94	46.328	Scophthalmus_maximus
WBGene00006626	tsn-1	99	47.476	ENSSDUG00000002699	snd1	93	47.154	Seriola_dumerili
WBGene00006626	tsn-1	99	42.965	ENSSLDG00000001950	snd1	99	42.642	Seriola_lalandi_dorsalis
WBGene00006626	tsn-1	75	47.338	ENSSARG00000004877	SND1	80	47.338	Sorex_araneus
WBGene00006626	tsn-1	70	47.449	ENSSPUG00000017586	SND1	96	47.449	Sphenodon_punctatus
WBGene00006626	tsn-1	76	49.750	ENSSPAG00000021398	snd1	98	49.917	Stegastes_partitus
WBGene00006626	tsn-1	98	47.201	ENSSSCG00000016590	SND1	98	46.762	Sus_scrofa
WBGene00006626	tsn-1	99	46.945	ENSTRUG00000014067	snd1	99	46.838	Takifugu_rubripes
WBGene00006626	tsn-1	99	47.267	ENSTNIG00000011019	snd1	98	50.000	Tetraodon_nigroviridis
WBGene00006626	tsn-1	94	43.578	ENSTBEG00000003999	SND1	100	43.284	Tupaia_belangeri
WBGene00006626	tsn-1	98	45.005	ENSTTRG00000006059	SND1	98	44.408	Tursiops_truncatus
WBGene00006626	tsn-1	69	45.946	ENSUAMG00000002820	-	86	45.946	Ursus_americanus
WBGene00006626	tsn-1	85	46.067	ENSUAMG00000005604	-	91	45.318	Ursus_americanus
WBGene00006626	tsn-1	98	47.085	ENSUMAG00000005960	SND1	97	46.645	Ursus_maritimus
WBGene00006626	tsn-1	66	47.652	ENSVPAG00000008302	SND1	63	47.652	Vicugna_pacos
WBGene00006626	tsn-1	98	46.762	ENSVVUG00000007226	SND1	98	46.601	Vulpes_vulpes
WBGene00006626	tsn-1	96	44.932	ENSXETG00000023043	snd1	100	44.932	Xenopus_tropicalis
WBGene00006626	tsn-1	92	46.208	ENSXCOG00000013629	snd1	98	46.208	Xiphophorus_couchianus
WBGene00006626	tsn-1	99	47.294	ENSXMAG00000011469	snd1	99	47.294	Xiphophorus_maculatus