EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00006946 (Gene tree)
Gene ID: -
Gene Symbol: prx-10
Alias: -
Full Name: Tryptophan--tRNA ligase%2C mitochondrial
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 3646 bases
Position: chrIII:5236410-5240055
Accession: P46579
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
C34E10	tRNA-synt_1b	PF00579.25	2.4e-69	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
C34E10.4b	-	2065	-	C34E10.4b	360 (aa)	NP_001021201	P46579
C34E10.4a	-	1441	-	C34E10.4a	314 (aa)	NP_001021200	UPI0001F779D2

Gene Model

Click here to download WBGene00006946's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00006946's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00006946	prx-10	91	42.727	ENSG00000116874	WARS2	90	42.727	Homo_sapiens
WBGene00006946	prx-10	91	42.424	ENSAPOG00000015140	wars2	95	42.424	Acanthochromis_polyacanthus
WBGene00006946	prx-10	91	42.727	ENSAMEG00000008147	WARS2	88	42.727	Ailuropoda_melanoleuca
WBGene00006946	prx-10	91	43.333	ENSACIG00000006912	wars2	92	43.333	Amphilophus_citrinellus
WBGene00006946	prx-10	68	41.700	ENSAOCG00000019628	wars2	77	41.700	Amphiprion_ocellaris
WBGene00006946	prx-10	94	42.286	ENSAPEG00000018028	wars2	92	43.333	Amphiprion_percula
WBGene00006946	prx-10	91	44.377	ENSATEG00000001096	wars2	97	44.377	Anabas_testudineus
WBGene00006946	prx-10	91	44.073	ENSAPLG00000009702	WARS2	97	44.073	Anas_platyrhynchos
WBGene00006946	prx-10	91	41.212	ENSACAG00000008122	WARS2	95	41.212	Anolis_carolinensis
WBGene00006946	prx-10	91	43.636	ENSANAG00000023161	WARS2	90	43.636	Aotus_nancymaae
WBGene00006946	prx-10	97	41.643	ENSACLG00000017174	wars2	93	41.643	Astatotilapia_calliptera
WBGene00006946	prx-10	96	42.254	ENSAMXG00000043045	wars2	96	42.733	Astyanax_mexicanus
WBGene00006946	prx-10	91	42.424	ENSBTAG00000005064	WARS2	90	42.424	Bos_taurus
WBGene00006946	prx-10	91	42.424	ENSCJAG00000005653	WARS2	96	42.424	Callithrix_jacchus
WBGene00006946	prx-10	91	42.727	ENSCAFG00000009996	WARS2	90	42.727	Canis_familiaris
WBGene00006946	prx-10	91	42.727	ENSCAFG00020020570	WARS2	90	42.727	Canis_lupus_dingo
WBGene00006946	prx-10	91	42.121	ENSCHIG00000013499	WARS2	90	42.121	Capra_hircus
WBGene00006946	prx-10	91	43.333	ENSTSYG00000013527	WARS2	90	43.333	Carlito_syrichta
WBGene00006946	prx-10	91	35.758	ENSCAPG00000016564	WARS2	98	35.758	Cavia_aperea
WBGene00006946	prx-10	91	41.212	ENSCPOG00000000616	WARS2	90	41.212	Cavia_porcellus
WBGene00006946	prx-10	91	43.333	ENSCCAG00000034099	WARS2	80	43.333	Cebus_capucinus
WBGene00006946	prx-10	91	42.727	ENSCATG00000041648	WARS2	98	42.727	Cercocebus_atys
WBGene00006946	prx-10	91	41.818	ENSCLAG00000004926	WARS2	90	41.818	Chinchilla_lanigera
WBGene00006946	prx-10	91	42.727	ENSCSAG00000001713	WARS2	90	42.727	Chlorocebus_sabaeus
WBGene00006946	prx-10	50	47.486	ENSCHOG00000000186	WARS2	65	47.486	Choloepus_hoffmanni
WBGene00006946	prx-10	91	42.857	ENSCPBG00000001321	WARS2	93	42.857	Chrysemys_picta_bellii
WBGene00006946	prx-10	91	38.671	ENSCSAVG00000003263	-	99	37.870	Ciona_savignyi
WBGene00006946	prx-10	91	43.030	ENSCANG00000028345	WARS2	90	43.030	Colobus_angolensis_palliatus
WBGene00006946	prx-10	91	43.333	ENSCGRG00001018718	Wars2	90	43.333	Cricetulus_griseus_chok1gshd
WBGene00006946	prx-10	91	43.333	ENSCGRG00000001125	Wars2	90	43.333	Cricetulus_griseus_crigri
WBGene00006946	prx-10	91	43.939	ENSCSEG00000009273	wars2	92	43.939	Cynoglossus_semilaevis
WBGene00006946	prx-10	91	43.465	ENSCVAG00000009790	wars2	94	43.465	Cyprinodon_variegatus
WBGene00006946	prx-10	93	43.195	ENSDARG00000011801	wars2	91	43.195	Danio_rerio
WBGene00006946	prx-10	91	41.515	ENSDNOG00000049516	WARS2	90	41.515	Dasypus_novemcinctus
WBGene00006946	prx-10	91	41.818	ENSDORG00000008562	Wars2	89	41.818	Dipodomys_ordii
WBGene00006946	prx-10	97	39.437	FBgn0036763	TrpRS-m	51	39.437	Drosophila_melanogaster
WBGene00006946	prx-10	89	42.724	ENSETEG00000019834	WARS2	89	42.724	Echinops_telfairi
WBGene00006946	prx-10	89	35.054	ENSEBUG00000007183	-	95	35.054	Eptatretus_burgeri
WBGene00006946	prx-10	91	43.030	ENSEASG00005006403	WARS2	83	43.030	Equus_asinus_asinus
WBGene00006946	prx-10	91	43.636	ENSECAG00000021622	WARS2	83	43.636	Equus_caballus
WBGene00006946	prx-10	91	42.727	ENSEEUG00000002792	WARS2	90	42.727	Erinaceus_europaeus
WBGene00006946	prx-10	86	40.514	ENSELUG00000006039	wars2	86	40.256	Esox_lucius
WBGene00006946	prx-10	91	43.030	ENSFCAG00000007370	WARS2	90	43.030	Felis_catus
WBGene00006946	prx-10	91	45.455	ENSFALG00000005028	WARS2	98	45.455	Ficedula_albicollis
WBGene00006946	prx-10	91	42.121	ENSFDAG00000009379	WARS2	90	42.121	Fukomys_damarensis
WBGene00006946	prx-10	91	42.424	ENSFHEG00000015611	wars2	88	42.424	Fundulus_heteroclitus
WBGene00006946	prx-10	91	42.857	ENSGALG00000014772	WARS2	98	42.857	Gallus_gallus
WBGene00006946	prx-10	97	41.360	ENSGAFG00000013237	wars2	95	41.360	Gambusia_affinis
WBGene00006946	prx-10	91	42.857	ENSGAGG00000010316	WARS2	98	42.857	Gopherus_agassizii
WBGene00006946	prx-10	91	43.030	ENSGGOG00000015028	WARS2	98	43.030	Gorilla_gorilla
WBGene00006946	prx-10	97	41.643	ENSHBUG00000004154	wars2	93	41.643	Haplochromis_burtoni
WBGene00006946	prx-10	91	41.212	ENSHGLG00000009507	WARS2	90	41.212	Heterocephalus_glaber_female
WBGene00006946	prx-10	91	41.212	ENSHGLG00100006143	WARS2	90	41.212	Heterocephalus_glaber_male
WBGene00006946	prx-10	93	43.155	ENSHCOG00000003597	wars2	83	43.068	Hippocampus_comes
WBGene00006946	prx-10	95	42.373	ENSIPUG00000003502	wars2	96	42.775	Ictalurus_punctatus
WBGene00006946	prx-10	91	43.636	ENSSTOG00000013051	WARS2	90	43.636	Ictidomys_tridecemlineatus
WBGene00006946	prx-10	91	42.121	ENSJJAG00000000897	Wars2	90	42.121	Jaculus_jaculus
WBGene00006946	prx-10	91	41.390	ENSKMAG00000014374	wars2	88	41.390	Kryptolebias_marmoratus
WBGene00006946	prx-10	91	43.161	ENSLBEG00000013918	wars2	97	43.161	Labrus_bergylta
WBGene00006946	prx-10	91	42.424	ENSLACG00000005629	WARS2	88	42.424	Latimeria_chalumnae
WBGene00006946	prx-10	91	43.465	ENSLOCG00000011009	wars2	90	43.161	Lepisosteus_oculatus
WBGene00006946	prx-10	91	42.727	ENSLAFG00000018455	WARS2	90	42.727	Loxodonta_africana
WBGene00006946	prx-10	91	42.249	ENSMFAG00000001270	WARS2	87	42.249	Macaca_fascicularis
WBGene00006946	prx-10	91	42.727	ENSMMUG00000041046	WARS2	90	42.727	Macaca_mulatta
WBGene00006946	prx-10	91	42.727	ENSMNEG00000029069	WARS2	89	42.727	Macaca_nemestrina
WBGene00006946	prx-10	91	42.727	ENSMLEG00000028699	WARS2	90	42.727	Mandrillus_leucophaeus
WBGene00006946	prx-10	91	43.333	ENSMAMG00000020704	wars2	90	43.333	Mastacembelus_armatus
WBGene00006946	prx-10	97	41.643	ENSMZEG00005019270	wars2	93	41.643	Maylandia_zebra
WBGene00006946	prx-10	73	40.449	ENSMGAG00000014233	WARS2	99	40.449	Meleagris_gallopavo
WBGene00006946	prx-10	91	42.727	ENSMAUG00000006394	Wars2	90	42.727	Mesocricetus_auratus
WBGene00006946	prx-10	91	43.333	ENSMICG00000026450	WARS2	100	42.751	Microcebus_murinus
WBGene00006946	prx-10	91	42.121	ENSMOCG00000005144	Wars2	90	42.424	Microtus_ochrogaster
WBGene00006946	prx-10	91	43.333	ENSMMOG00000019428	wars2	90	43.333	Mola_mola
WBGene00006946	prx-10	91	43.465	ENSMODG00000005334	WARS2	90	43.465	Monodelphis_domestica
WBGene00006946	prx-10	91	43.636	ENSMALG00000016450	wars2	87	43.636	Monopterus_albus
WBGene00006946	prx-10	91	42.121	ENSMUSG00000004233	Wars2	90	42.121	Mus_musculus
WBGene00006946	prx-10	91	41.818	MGP_PahariEiJ_G0026862	Wars2	90	41.818	Mus_pahari
WBGene00006946	prx-10	91	40.171	MGP_SPRETEiJ_G0026368	Wars2	90	40.057	Mus_spretus
WBGene00006946	prx-10	91	43.333	ENSMPUG00000001541	WARS2	90	43.333	Mustela_putorius_furo
WBGene00006946	prx-10	91	43.636	ENSMLUG00000002965	WARS2	91	43.636	Myotis_lucifugus
WBGene00006946	prx-10	91	43.030	ENSNBRG00000010952	wars2	97	43.030	Neolamprologus_brichardi
WBGene00006946	prx-10	91	42.424	ENSNLEG00000005349	WARS2	90	42.424	Nomascus_leucogenys
WBGene00006946	prx-10	68	32.520	ENSMEUG00000005313	-	68	32.520	Notamacropus_eugenii
WBGene00006946	prx-10	91	43.333	ENSOPRG00000004874	WARS2	90	43.333	Ochotona_princeps
WBGene00006946	prx-10	91	40.606	ENSODEG00000001212	WARS2	90	40.606	Octodon_degus
WBGene00006946	prx-10	97	40.793	ENSONIG00000015691	wars2	94	40.793	Oreochromis_niloticus
WBGene00006946	prx-10	91	42.857	ENSOANG00000002254	WARS2	89	42.857	Ornithorhynchus_anatinus
WBGene00006946	prx-10	91	43.636	ENSOCUG00000012330	WARS2	82	43.636	Oryctolagus_cuniculus
WBGene00006946	prx-10	99	40.496	ENSORLG00000008482	wars2	96	41.691	Oryzias_latipes
WBGene00006946	prx-10	93	41.888	ENSORLG00020022461	wars2	99	41.888	Oryzias_latipes_hni
WBGene00006946	prx-10	99	40.771	ENSORLG00015022386	wars2	97	41.716	Oryzias_latipes_hsok
WBGene00006946	prx-10	92	43.452	ENSOMEG00000017027	wars2	90	43.452	Oryzias_melastigma
WBGene00006946	prx-10	91	42.424	ENSOGAG00000007285	WARS2	98	42.424	Otolemur_garnettii
WBGene00006946	prx-10	91	42.424	ENSOARG00000020381	WARS2	90	42.424	Ovis_aries
WBGene00006946	prx-10	91	42.727	ENSPPAG00000032746	WARS2	96	42.857	Pan_paniscus
WBGene00006946	prx-10	91	43.030	ENSPPRG00000017754	WARS2	90	43.030	Panthera_pardus
WBGene00006946	prx-10	91	43.030	ENSPTIG00000021158	WARS2	90	43.030	Panthera_tigris_altaica
WBGene00006946	prx-10	91	42.727	ENSPTRG00000001173	WARS2	96	42.857	Pan_troglodytes
WBGene00006946	prx-10	91	42.249	ENSPANG00000011381	WARS2	87	42.249	Papio_anubis
WBGene00006946	prx-10	91	42.249	ENSPKIG00000024865	wars2	88	42.249	Paramormyrops_kingsleyae
WBGene00006946	prx-10	93	42.560	ENSPSIG00000017566	WARS2	99	42.560	Pelodiscus_sinensis
WBGene00006946	prx-10	91	42.727	ENSPMGG00000022666	wars2	98	42.727	Periophthalmus_magnuspinnatus
WBGene00006946	prx-10	91	42.424	ENSPEMG00000018152	Wars2	90	42.424	Peromyscus_maniculatus_bairdii
WBGene00006946	prx-10	91	42.857	ENSPCIG00000029906	WARS2	90	42.857	Phascolarctos_cinereus
WBGene00006946	prx-10	96	41.573	ENSPFOG00000018055	wars2	95	41.573	Poecilia_formosa
WBGene00006946	prx-10	91	43.333	ENSPLAG00000007267	wars2	91	43.333	Poecilia_latipinna
WBGene00006946	prx-10	91	43.030	ENSPMEG00000007565	WARS2	91	43.030	Poecilia_mexicana
WBGene00006946	prx-10	96	41.011	ENSPREG00000019589	wars2	95	41.011	Poecilia_reticulata
WBGene00006946	prx-10	91	42.727	ENSPPYG00000000967	WARS2	90	42.727	Pongo_abelii
WBGene00006946	prx-10	91	40.909	ENSPCAG00000016581	WARS2	90	40.909	Procavia_capensis
WBGene00006946	prx-10	91	43.030	ENSPCOG00000026406	WARS2	90	43.030	Propithecus_coquereli
WBGene00006946	prx-10	91	42.727	ENSPVAG00000001920	WARS2	90	42.727	Pteropus_vampyrus
WBGene00006946	prx-10	50	49.162	ENSPNYG00000006314	wars2	77	49.162	Pundamilia_nyererei
WBGene00006946	prx-10	91	44.545	ENSPNAG00000001529	wars2	88	44.545	Pygocentrus_nattereri
WBGene00006946	prx-10	91	42.727	ENSRNOG00000019508	Wars2	90	42.727	Rattus_norvegicus
WBGene00006946	prx-10	91	42.727	ENSRBIG00000019074	WARS2	90	42.727	Rhinopithecus_bieti
WBGene00006946	prx-10	68	40.486	ENSRROG00000032725	WARS2	100	40.486	Rhinopithecus_roxellana
WBGene00006946	prx-10	99	35.638	YDR268W	MSW1	98	35.638	Saccharomyces_cerevisiae
WBGene00006946	prx-10	91	42.727	ENSSBOG00000032994	WARS2	90	42.727	Saimiri_boliviensis_boliviensis
WBGene00006946	prx-10	91	43.675	ENSSHAG00000013680	WARS2	90	43.675	Sarcophilus_harrisii
WBGene00006946	prx-10	65	46.809	ENSSFOG00015005317	-	74	46.809	Scleropages_formosus
WBGene00006946	prx-10	70	46.429	ENSSFOG00015000616	wars2	65	46.429	Scleropages_formosus
WBGene00006946	prx-10	91	42.814	ENSSMAG00000008263	wars2	88	42.814	Scophthalmus_maximus
WBGene00006946	prx-10	91	43.636	ENSSDUG00000014223	wars2	91	43.636	Seriola_dumerili
WBGene00006946	prx-10	91	43.939	ENSSLDG00000012949	wars2	95	43.939	Seriola_lalandi_dorsalis
WBGene00006946	prx-10	92	43.452	ENSSARG00000011146	WARS2	91	43.452	Sorex_araneus
WBGene00006946	prx-10	91	41.945	ENSSPUG00000005313	WARS2	90	41.945	Sphenodon_punctatus
WBGene00006946	prx-10	91	41.390	ENSSPAG00000013998	wars2	92	41.390	Stegastes_partitus
WBGene00006946	prx-10	91	43.939	ENSSSCG00000027153	WARS2	84	43.939	Sus_scrofa
WBGene00006946	prx-10	91	44.242	ENSTGUG00000013353	-	98	44.242	Taeniopygia_guttata
WBGene00006946	prx-10	91	42.216	ENSTRUG00000016079	wars2	88	42.216	Takifugu_rubripes
WBGene00006946	prx-10	91	43.939	ENSTNIG00000015661	wars2	95	43.939	Tetraodon_nigroviridis
WBGene00006946	prx-10	91	41.818	ENSTBEG00000014634	WARS2	90	41.818	Tupaia_belangeri
WBGene00006946	prx-10	91	43.333	ENSTTRG00000000108	WARS2	90	43.333	Tursiops_truncatus
WBGene00006946	prx-10	91	42.727	ENSUMAG00000000553	WARS2	90	42.727	Ursus_maritimus
WBGene00006946	prx-10	91	41.818	ENSVPAG00000010266	WARS2	89	41.818	Vicugna_pacos
WBGene00006946	prx-10	91	42.727	ENSVVUG00000010766	WARS2	90	42.727	Vulpes_vulpes
WBGene00006946	prx-10	51	47.541	ENSXCOG00000018178	wars2	76	47.541	Xiphophorus_couchianus
WBGene00006946	prx-10	96	40.169	ENSXMAG00000021964	wars2	95	40.169	Xiphophorus_maculatus