EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00006968 (Gene tree)
Gene ID: -
Gene Symbol: yars-2
Alias: yars-1
Full Name: Tyrosine--tRNA ligase
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 1764 bases
Position: chrIV:4710861-4712624
Accession: H2KZL6
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
K08F11	tRNA-synt_1b	PF00579.25	7.2e-55	1	1
K08F11	tRNA-synt_1b	PF00579.25	6.3e-37	1	1
K08F11	tRNA-synt_1b	PF00579.25	6.3e-37	1	1
K08F11	tRNA-synt_1b	PF00579.25	6.3e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
K08F11.4b.2	-	1329	NM_171325	K08F11.4b.2	327 (aa)	NP_741383	Q8MPU1
K08F11.4b.3	-	1062	NM_171325	K08F11.4b.3	327 (aa)	NP_741383	Q8MPU1
K08F11.4b.1	-	1505	-	K08F11.4b.1	327 (aa)	-	Q8MPU1
K08F11.4a	-	1407	NM_171324	K08F11.4a	447 (aa)	NP_741382	H2KZL6

Gene Model

Click here to download WBGene00006968's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00006968's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00006968	yars-2	92	35.443	ENSG00000139131	YARS2	84	41.434	Homo_sapiens
WBGene00006968	yars-2	99	33.908	ENSAPOG00000008208	yars2	90	35.892	Acanthochromis_polyacanthus
WBGene00006968	yars-2	92	35.048	ENSAMEG00000008909	YARS2	85	35.452	Ailuropoda_melanoleuca
WBGene00006968	yars-2	99	31.722	ENSACIG00000018640	yars2	90	34.112	Amphilophus_citrinellus
WBGene00006968	yars-2	99	33.621	ENSAOCG00000005594	yars2	90	35.714	Amphiprion_ocellaris
WBGene00006968	yars-2	99	33.621	ENSAPEG00000006952	yars2	90	35.909	Amphiprion_percula
WBGene00006968	yars-2	99	35.088	ENSATEG00000019778	yars2	90	36.652	Anabas_testudineus
WBGene00006968	yars-2	80	36.567	ENSAPLG00000004982	YARS2	99	36.567	Anas_platyrhynchos
WBGene00006968	yars-2	92	34.921	ENSACAG00000012351	YARS2	83	35.351	Anolis_carolinensis
WBGene00006968	yars-2	92	35.443	ENSANAG00000026208	YARS2	85	36.232	Aotus_nancymaae
WBGene00006968	yars-2	99	32.471	ENSACLG00000026295	yars2	90	35.045	Astatotilapia_calliptera
WBGene00006968	yars-2	99	34.018	ENSAMXG00000015193	yars2	90	34.945	Astyanax_mexicanus
WBGene00006968	yars-2	92	35.443	ENSBTAG00000011399	YARS2	85	35.904	Bos_taurus
WBGene00006968	yars-2	92	35.048	ENSCJAG00000018129	YARS2	85	35.697	Callithrix_jacchus
WBGene00006968	yars-2	92	35.144	ENSCAFG00000010496	YARS2	85	35.854	Canis_familiaris
WBGene00006968	yars-2	92	35.144	ENSCAFG00020019713	YARS2	85	35.854	Canis_lupus_dingo
WBGene00006968	yars-2	92	35.443	ENSCHIG00000002520	YARS2	86	35.904	Capra_hircus
WBGene00006968	yars-2	92	34.603	ENSTSYG00000013725	YARS2	84	35.194	Carlito_syrichta
WBGene00006968	yars-2	92	35.759	ENSCPOG00000015276	YARS2	87	36.320	Cavia_porcellus
WBGene00006968	yars-2	92	35.048	ENSCCAG00000038073	YARS2	85	35.697	Cebus_capucinus
WBGene00006968	yars-2	92	35.759	ENSCATG00000039275	YARS2	85	35.941	Cercocebus_atys
WBGene00006968	yars-2	92	36.076	ENSCLAG00000002000	YARS2	85	37.019	Chinchilla_lanigera
WBGene00006968	yars-2	92	36.076	ENSCSAG00000007382	YARS2	85	36.186	Chlorocebus_sabaeus
WBGene00006968	yars-2	92	34.727	ENSCHOG00000011749	YARS2	85	34.878	Choloepus_hoffmanni
WBGene00006968	yars-2	99	33.529	ENSCPBG00000020392	YARS2	85	34.689	Chrysemys_picta_bellii
WBGene00006968	yars-2	99	33.891	ENSCING00000007475	-	91	33.891	Ciona_intestinalis
WBGene00006968	yars-2	92	36.246	ENSCSAVG00000001469	-	87	36.049	Ciona_savignyi
WBGene00006968	yars-2	65	39.799	ENSCANG00000002599	YARS2	71	39.799	Colobus_angolensis_palliatus
WBGene00006968	yars-2	92	35.331	ENSCGRG00001019281	Yars2	85	35.194	Cricetulus_griseus_chok1gshd
WBGene00006968	yars-2	86	34.843	ENSCSEG00000009212	yars2	92	34.843	Cynoglossus_semilaevis
WBGene00006968	yars-2	99	33.621	ENSCVAG00000007972	yars2	90	36.180	Cyprinodon_variegatus
WBGene00006968	yars-2	99	33.041	ENSDARG00000077299	yars2	92	34.624	Danio_rerio
WBGene00006968	yars-2	92	36.278	ENSDNOG00000024479	YARS2	86	36.957	Dasypus_novemcinctus
WBGene00006968	yars-2	63	33.962	ENSDORG00000011489	Yars2	58	33.962	Dipodomys_ordii
WBGene00006968	yars-2	99	32.845	FBgn0035064	TyrRS-m	87	37.037	Drosophila_melanogaster
WBGene00006968	yars-2	92	33.871	ENSEBUG00000006652	yars2	90	33.803	Eptatretus_burgeri
WBGene00006968	yars-2	92	34.727	ENSEASG00005004548	YARS2	85	35.593	Equus_asinus_asinus
WBGene00006968	yars-2	92	35.048	ENSECAG00000011140	YARS2	85	35.523	Equus_caballus
WBGene00006968	yars-2	99	34.503	ENSELUG00000007909	yars2	85	37.273	Esox_lucius
WBGene00006968	yars-2	92	35.759	ENSFCAG00000005329	YARS2	85	35.990	Felis_catus
WBGene00006968	yars-2	85	36.934	ENSFALG00000001189	YARS2	95	36.934	Ficedula_albicollis
WBGene00006968	yars-2	92	35.127	ENSFDAG00000006499	YARS2	86	35.593	Fukomys_damarensis
WBGene00006968	yars-2	99	34.211	ENSFHEG00000002505	yars2	80	36.468	Fundulus_heteroclitus
WBGene00006968	yars-2	99	34.205	ENSGMOG00000001082	yars2	97	34.205	Gadus_morhua
WBGene00006968	yars-2	99	33.623	ENSGALG00000012919	YARS2	84	34.951	Gallus_gallus
WBGene00006968	yars-2	99	33.824	ENSGAFG00000003993	yars2	90	35.698	Gambusia_affinis
WBGene00006968	yars-2	99	34.706	ENSGACG00000003720	yars2	92	36.613	Gasterosteus_aculeatus
WBGene00006968	yars-2	92	33.861	ENSGAGG00000007739	YARS2	85	34.293	Gopherus_agassizii
WBGene00006968	yars-2	55	40.000	ENSGGOG00000026482	-	80	41.057	Gorilla_gorilla
WBGene00006968	yars-2	99	32.471	ENSHBUG00000014602	yars2	90	35.045	Haplochromis_burtoni
WBGene00006968	yars-2	92	34.603	ENSHGLG00000009938	YARS2	81	34.951	Heterocephalus_glaber_female
WBGene00006968	yars-2	92	34.603	ENSHGLG00100001061	YARS2	85	34.951	Heterocephalus_glaber_male
WBGene00006968	yars-2	76	38.636	ENSHCOG00000004523	yars2	75	38.636	Hippocampus_comes
WBGene00006968	yars-2	99	33.529	ENSIPUG00000011637	yars2	91	35.160	Ictalurus_punctatus
WBGene00006968	yars-2	92	35.556	ENSSTOG00000011917	YARS2	86	35.680	Ictidomys_tridecemlineatus
WBGene00006968	yars-2	92	35.556	ENSJJAG00000000641	Yars2	86	35.680	Jaculus_jaculus
WBGene00006968	yars-2	99	34.218	ENSKMAG00000016962	yars2	91	36.054	Kryptolebias_marmoratus
WBGene00006968	yars-2	99	35.380	ENSLBEG00000022576	yars2	90	36.446	Labrus_bergylta
WBGene00006968	yars-2	96	32.018	ENSLACG00000006720	YARS2	95	32.018	Latimeria_chalumnae
WBGene00006968	yars-2	99	33.923	ENSLOCG00000016695	yars2	92	35.469	Lepisosteus_oculatus
WBGene00006968	yars-2	92	34.727	ENSLAFG00000017360	YARS2	84	34.815	Loxodonta_africana
WBGene00006968	yars-2	92	35.759	ENSMFAG00000032763	YARS2	85	35.941	Macaca_fascicularis
WBGene00006968	yars-2	92	35.759	ENSMMUG00000013654	YARS2	85	35.941	Macaca_mulatta
WBGene00006968	yars-2	55	39.844	ENSMNEG00000033863	YARS2	77	41.434	Macaca_nemestrina
WBGene00006968	yars-2	92	35.759	ENSMLEG00000040261	YARS2	85	35.941	Mandrillus_leucophaeus
WBGene00006968	yars-2	99	34.018	ENSMAMG00000023144	yars2	90	35.308	Mastacembelus_armatus
WBGene00006968	yars-2	99	33.918	ENSMZEG00005010162	yars2	90	36.199	Maylandia_zebra
WBGene00006968	yars-2	80	37.079	ENSMGAG00000013318	YARS2	97	37.079	Meleagris_gallopavo
WBGene00006968	yars-2	92	36.278	ENSMAUG00000012334	Yars2	85	35.922	Mesocricetus_auratus
WBGene00006968	yars-2	92	36.076	ENSMICG00000033335	YARS2	85	36.232	Microcebus_murinus
WBGene00006968	yars-2	92	36.278	ENSMOCG00000011433	Yars2	85	35.680	Microtus_ochrogaster
WBGene00006968	yars-2	71	40.120	ENSMMOG00000001063	yars2	79	42.570	Mola_mola
WBGene00006968	yars-2	92	32.258	ENSMODG00000012921	-	85	33.007	Monodelphis_domestica
WBGene00006968	yars-2	91	35.556	ENSMALG00000013849	yars2	78	38.259	Monopterus_albus
WBGene00006968	yars-2	92	36.278	MGP_CAROLIEiJ_G0020491	Yars2	85	35.437	Mus_caroli
WBGene00006968	yars-2	92	35.962	ENSMUSG00000022792	Yars2	85	35.194	Mus_musculus
WBGene00006968	yars-2	92	36.278	MGP_PahariEiJ_G0016196	Yars2	85	35.437	Mus_pahari
WBGene00006968	yars-2	92	36.278	MGP_SPRETEiJ_G0021386	Yars2	85	35.437	Mus_spretus
WBGene00006968	yars-2	92	34.516	ENSMPUG00000000223	YARS2	85	35.294	Mustela_putorius_furo
WBGene00006968	yars-2	92	35.443	ENSMLUG00000001614	YARS2	84	36.298	Myotis_lucifugus
WBGene00006968	yars-2	92	35.238	ENSNGAG00000021477	Yars2	85	35.194	Nannospalax_galili
WBGene00006968	yars-2	99	32.471	ENSNBRG00000018713	yars2	90	34.812	Neolamprologus_brichardi
WBGene00006968	yars-2	92	35.370	ENSNLEG00000016641	YARS2	85	36.186	Nomascus_leucogenys
WBGene00006968	yars-2	92	33.762	ENSOPRG00000007817	-	84	34.398	Ochotona_princeps
WBGene00006968	yars-2	92	31.922	ENSODEG00000006403	YARS2	84	33.416	Octodon_degus
WBGene00006968	yars-2	99	32.378	ENSONIG00000008830	yars2	90	34.956	Oreochromis_niloticus
WBGene00006968	yars-2	54	37.500	ENSOANG00000019795	-	61	37.500	Ornithorhynchus_anatinus
WBGene00006968	yars-2	92	35.443	ENSOCUG00000000022	YARS2	84	36.058	Oryctolagus_cuniculus
WBGene00006968	yars-2	99	34.412	ENSORLG00000002424	yars2	92	35.927	Oryzias_latipes
WBGene00006968	yars-2	99	33.235	ENSORLG00020019938	yars2	92	35.011	Oryzias_latipes_hni
WBGene00006968	yars-2	71	36.335	ENSORLG00015012856	yars2	77	36.335	Oryzias_latipes_hsok
WBGene00006968	yars-2	99	35.673	ENSOMEG00000007611	yars2	92	36.902	Oryzias_melastigma
WBGene00006968	yars-2	92	30.341	ENSOGAG00000011505	YARS2	84	31.905	Otolemur_garnettii
WBGene00006968	yars-2	92	35.331	ENSOARG00000019327	-	85	35.817	Ovis_aries
WBGene00006968	yars-2	92	35.443	ENSPPAG00000036590	YARS2	85	35.697	Pan_paniscus
WBGene00006968	yars-2	92	35.759	ENSPPRG00000011306	YARS2	85	35.990	Panthera_pardus
WBGene00006968	yars-2	92	35.759	ENSPTIG00000020214	YARS2	85	35.990	Panthera_tigris_altaica
WBGene00006968	yars-2	92	35.443	ENSPTRG00000004819	YARS2	85	35.697	Pan_troglodytes
WBGene00006968	yars-2	92	35.759	ENSPANG00000015833	YARS2	85	35.941	Papio_anubis
WBGene00006968	yars-2	98	33.983	ENSPKIG00000021759	yars2	94	33.983	Paramormyrops_kingsleyae
WBGene00006968	yars-2	94	35.520	ENSPKIG00000022142	YARS2	82	35.520	Paramormyrops_kingsleyae
WBGene00006968	yars-2	80	33.083	ENSPSIG00000007855	YARS2	99	33.083	Pelodiscus_sinensis
WBGene00006968	yars-2	99	31.420	ENSPMGG00000005934	yars2	90	33.412	Periophthalmus_magnuspinnatus
WBGene00006968	yars-2	92	35.962	ENSPEMG00000007655	Yars2	86	35.194	Peromyscus_maniculatus_bairdii
WBGene00006968	yars-2	99	32.286	ENSPMAG00000002536	yars2	91	34.529	Petromyzon_marinus
WBGene00006968	yars-2	99	35.103	ENSPFOG00000012264	yars2	90	36.613	Poecilia_formosa
WBGene00006968	yars-2	99	35.103	ENSPLAG00000003699	yars2	90	36.613	Poecilia_latipinna
WBGene00006968	yars-2	99	35.103	ENSPMEG00000024102	yars2	90	36.384	Poecilia_mexicana
WBGene00006968	yars-2	99	34.706	ENSPREG00000011521	yars2	90	36.613	Poecilia_reticulata
WBGene00006968	yars-2	92	36.478	ENSPPYG00000004406	YARS2	85	36.496	Pongo_abelii
WBGene00006968	yars-2	53	39.044	ENSPCAG00000006086	YARS2	51	39.044	Procavia_capensis
WBGene00006968	yars-2	92	35.443	ENSPCOG00000026397	YARS2	85	36.298	Propithecus_coquereli
WBGene00006968	yars-2	92	36.164	ENSPVAG00000000520	YARS2	85	35.646	Pteropus_vampyrus
WBGene00006968	yars-2	99	32.471	ENSPNYG00000007346	yars2	90	35.045	Pundamilia_nyererei
WBGene00006968	yars-2	99	32.059	ENSPNAG00000004766	yars2	94	33.775	Pygocentrus_nattereri
WBGene00006968	yars-2	92	36.593	ENSRNOG00000025252	Yars2	86	36.165	Rattus_norvegicus
WBGene00006968	yars-2	92	35.443	ENSRBIG00000041046	-	85	35.697	Rhinopithecus_bieti
WBGene00006968	yars-2	71	37.346	ENSRBIG00000038155	-	68	37.346	Rhinopithecus_bieti
WBGene00006968	yars-2	71	37.690	ENSRBIG00000037050	-	68	37.346	Rhinopithecus_bieti
WBGene00006968	yars-2	72	38.182	ENSRROG00000030036	-	72	38.182	Rhinopithecus_roxellana
WBGene00006968	yars-2	92	35.443	ENSRROG00000037913	-	85	35.697	Rhinopithecus_roxellana
WBGene00006968	yars-2	92	34.727	ENSSBOG00000023473	YARS2	85	35.452	Saimiri_boliviensis_boliviensis
WBGene00006968	yars-2	92	36.218	ENSSHAG00000004495	YARS2	84	35.961	Sarcophilus_harrisii
WBGene00006968	yars-2	97	34.529	ENSSFOG00015002490	yars2	93	34.529	Scleropages_formosus
WBGene00006968	yars-2	99	31.965	ENSSMAG00000006844	yars2	87	34.240	Scophthalmus_maximus
WBGene00006968	yars-2	99	33.923	ENSSDUG00000023361	yars2	90	35.335	Seriola_dumerili
WBGene00006968	yars-2	99	33.923	ENSSLDG00000023865	yars2	90	35.797	Seriola_lalandi_dorsalis
WBGene00006968	yars-2	92	33.544	ENSSPUG00000000061	YARS2	82	33.491	Sphenodon_punctatus
WBGene00006968	yars-2	99	32.951	ENSSPAG00000020638	yars2	90	35.202	Stegastes_partitus
WBGene00006968	yars-2	92	35.759	ENSSSCG00000027429	-	85	35.990	Sus_scrofa
WBGene00006968	yars-2	96	34.472	ENSTGUG00000011510	YARS2	98	34.472	Taeniopygia_guttata
WBGene00006968	yars-2	99	34.384	ENSTRUG00000016475	yars2	90	35.841	Takifugu_rubripes
WBGene00006968	yars-2	99	33.918	ENSTNIG00000006253	yars2	90	35.991	Tetraodon_nigroviridis
WBGene00006968	yars-2	85	36.301	ENSTBEG00000008274	YARS2	60	36.301	Tupaia_belangeri
WBGene00006968	yars-2	92	34.700	ENSTTRG00000013823	YARS2	85	35.422	Tursiops_truncatus
WBGene00006968	yars-2	92	35.370	ENSUAMG00000014358	YARS2	85	35.941	Ursus_americanus
WBGene00006968	yars-2	92	35.370	ENSUMAG00000003011	YARS2	85	35.941	Ursus_maritimus
WBGene00006968	yars-2	92	36.076	ENSVPAG00000004767	YARS2	85	36.957	Vicugna_pacos
WBGene00006968	yars-2	92	35.849	ENSVVUG00000012736	YARS2	85	36.386	Vulpes_vulpes
WBGene00006968	yars-2	99	34.513	ENSXCOG00000020889	yars2	90	36.468	Xiphophorus_couchianus
WBGene00006968	yars-2	99	34.808	ENSXMAG00000009650	yars2	90	36.697	Xiphophorus_maculatus