EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00007000 (Gene tree)
Gene ID: -
Gene Symbol: tufm-1
Alias: -
Full Name: Elongation factor Tu homologue%3B TU elongation Factor (EF-Tu)%2C Mitochondrial
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 3100 bases
Position: chrIII:2811870-2814969
Accession: G5ECM6
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
Y71H2AM	GTP_EFTU	PF00009.27	5.1e-55	1	1
Y71H2AM	GTP_EFTU	PF00009.27	5.1e-55	1	1
Y71H2AM	GTP_EFTU_D2	PF03144.25	2.6e-15	1	1
Y71H2AM	GTP_EFTU_D2	PF03144.25	2.6e-15	1	1
Y71H2AM	GTP_EFTU_D3	PF03143.17	1.9e-11	1	1
Y71H2AM	GTP_EFTU_D3	PF03143.17	1.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
Y71H2AM.23.2	-	1976	NM_065222	Y71H2AM.23.2	496 (aa)	NP_497623	G5ECM6
Y71H2AM.23.1	-	1703	NM_065222	Y71H2AM.23.1	496 (aa)	NP_497623	G5ECM6

Gene Model

Click here to download WBGene00007000's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00007000's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00007000	tufm-1	79	45.202	WBGene00007001	tufm-2	86	45.202

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00007000	tufm-1	84	56.295	ENSG00000178952	TUFM	91	56.028	Homo_sapiens
WBGene00007000	tufm-1	80	59.701	ENSAPOG00000013385	tufm	88	59.701	Acanthochromis_polyacanthus
WBGene00007000	tufm-1	84	56.057	ENSAMEG00000015551	TUFM	91	56.057	Ailuropoda_melanoleuca
WBGene00007000	tufm-1	83	56.835	ENSACIG00000007388	tufm	94	56.835	Amphilophus_citrinellus
WBGene00007000	tufm-1	80	59.950	ENSAOCG00000001032	tufm	92	59.204	Amphiprion_ocellaris
WBGene00007000	tufm-1	80	59.950	ENSAPEG00000015751	tufm	92	59.204	Amphiprion_percula
WBGene00007000	tufm-1	82	59.268	ENSATEG00000002905	tufm	92	56.944	Anabas_testudineus
WBGene00007000	tufm-1	83	55.904	ENSACAG00000005399	TUFM	89	55.904	Anolis_carolinensis
WBGene00007000	tufm-1	86	55.814	ENSANAG00000022206	TUFM	92	55.814	Aotus_nancymaae
WBGene00007000	tufm-1	84	55.924	ENSACLG00000007403	tufm	88	54.988	Astatotilapia_calliptera
WBGene00007000	tufm-1	84	56.295	ENSBTAG00000019216	TUFM	91	56.295	Bos_taurus
WBGene00007000	tufm-1	86	55.349	ENSCJAG00000006236	TUFM	92	55.349	Callithrix_jacchus
WBGene00007000	tufm-1	84	55.582	ENSCAFG00000017216	TUFM	91	55.582	Canis_familiaris
WBGene00007000	tufm-1	84	55.582	ENSCAFG00020017574	TUFM	91	55.582	Canis_lupus_dingo
WBGene00007000	tufm-1	84	56.295	ENSCHIG00000020583	TUFM	91	56.295	Capra_hircus
WBGene00007000	tufm-1	85	55.556	ENSTSYG00000026053	TUFM	91	55.556	Carlito_syrichta
WBGene00007000	tufm-1	84	56.295	ENSCPOG00000010534	TUFM	91	56.295	Cavia_porcellus
WBGene00007000	tufm-1	86	55.349	ENSCCAG00000033296	TUFM	92	55.349	Cebus_capucinus
WBGene00007000	tufm-1	85	55.792	ENSCATG00000035822	TUFM	91	55.792	Cercocebus_atys
WBGene00007000	tufm-1	85	56.295	ENSCLAG00000013969	TUFM	91	56.295	Chinchilla_lanigera
WBGene00007000	tufm-1	85	55.792	ENSCSAG00000006314	TUFM	91	55.792	Chlorocebus_sabaeus
WBGene00007000	tufm-1	85	55.319	ENSCHOG00000009077	TUFM	91	55.319	Choloepus_hoffmanni
WBGene00007000	tufm-1	86	53.828	ENSCPBG00000003874	TUFM	92	53.828	Chrysemys_picta_bellii
WBGene00007000	tufm-1	82	51.707	ENSCING00000002841	-	93	51.707	Ciona_intestinalis
WBGene00007000	tufm-1	84	51.190	ENSCSAVG00000009380	-	90	51.190	Ciona_savignyi
WBGene00007000	tufm-1	82	56.311	ENSCANG00000035829	TUFM	89	56.311	Colobus_angolensis_palliatus
WBGene00007000	tufm-1	85	55.269	ENSCGRG00001022949	Tufm	92	55.269	Cricetulus_griseus_chok1gshd
WBGene00007000	tufm-1	85	55.269	ENSCGRG00000001868	-	92	55.269	Cricetulus_griseus_crigri
WBGene00007000	tufm-1	81	38.480	ENSCGRG00000013193	-	87	38.480	Cricetulus_griseus_crigri
WBGene00007000	tufm-1	82	57.353	ENSCSEG00000013841	tufm	93	57.353	Cynoglossus_semilaevis
WBGene00007000	tufm-1	86	55.452	ENSCVAG00000006251	tufm	94	57.702	Cyprinodon_variegatus
WBGene00007000	tufm-1	82	57.073	ENSDARG00000104173	tufm	90	57.073	Danio_rerio
WBGene00007000	tufm-1	86	54.651	ENSDNOG00000047636	TUFM	92	54.651	Dasypus_novemcinctus
WBGene00007000	tufm-1	77	48.168	ENSDORG00000023544	-	90	48.168	Dipodomys_ordii
WBGene00007000	tufm-1	82	55.911	FBgn0024556	mEFTu1	82	55.911	Drosophila_melanogaster
WBGene00007000	tufm-1	72	46.218	ENSETEG00000009601	TUFM	88	46.218	Echinops_telfairi
WBGene00007000	tufm-1	83	55.961	ENSEBUG00000015907	tufm	66	55.961	Eptatretus_burgeri
WBGene00007000	tufm-1	84	55.792	ENSEASG00005015477	TUFM	91	55.792	Equus_asinus_asinus
WBGene00007000	tufm-1	84	55.792	ENSECAG00000019763	TUFM	91	55.792	Equus_caballus
WBGene00007000	tufm-1	72	57.939	ENSEEUG00000001402	TUFM	88	57.939	Erinaceus_europaeus
WBGene00007000	tufm-1	81	57.740	ENSELUG00000013410	tufm	86	57.740	Esox_lucius
WBGene00007000	tufm-1	84	55.819	ENSFCAG00000003103	TUFM	59	55.819	Felis_catus
WBGene00007000	tufm-1	80	52.488	ENSFDAG00000010881	TUFM	99	52.488	Fukomys_damarensis
WBGene00007000	tufm-1	86	52.681	ENSFHEG00000020646	tufm	93	52.681	Fundulus_heteroclitus
WBGene00007000	tufm-1	84	57.452	ENSGMOG00000014616	tufm	92	57.452	Gadus_morhua
WBGene00007000	tufm-1	86	55.220	ENSGAFG00000004682	tufm	98	55.529	Gambusia_affinis
WBGene00007000	tufm-1	80	58.250	ENSGACG00000012961	tufm	90	61.371	Gasterosteus_aculeatus
WBGene00007000	tufm-1	82	55.911	ENSGAGG00000006132	TUFM	96	56.533	Gopherus_agassizii
WBGene00007000	tufm-1	84	56.429	ENSGGOG00000014136	TUFM	91	56.028	Gorilla_gorilla
WBGene00007000	tufm-1	90	53.468	ENSHBUG00000019031	tufm	95	53.468	Haplochromis_burtoni
WBGene00007000	tufm-1	84	55.107	ENSHGLG00000006613	TUFM	91	55.107	Heterocephalus_glaber_female
WBGene00007000	tufm-1	84	51.781	ENSHGLG00100004096	TUFM	91	51.781	Heterocephalus_glaber_male
WBGene00007000	tufm-1	86	55.944	ENSHCOG00000014418	tufm	97	56.368	Hippocampus_comes
WBGene00007000	tufm-1	65	32.298	ENSIPUG00000020682	-	90	32.298	Ictalurus_punctatus
WBGene00007000	tufm-1	82	57.457	ENSIPUG00000022457	tufm	90	57.457	Ictalurus_punctatus
WBGene00007000	tufm-1	84	55.981	ENSSTOG00000011837	TUFM	91	55.981	Ictidomys_tridecemlineatus
WBGene00007000	tufm-1	84	55.924	ENSJJAG00000011840	Tufm	91	55.924	Jaculus_jaculus
WBGene00007000	tufm-1	85	54.245	ENSKMAG00000009794	tufm	93	54.245	Kryptolebias_marmoratus
WBGene00007000	tufm-1	81	58.809	ENSLBEG00000023735	tufm	93	58.809	Labrus_bergylta
WBGene00007000	tufm-1	82	56.265	ENSLACG00000008242	TUFM	89	56.265	Latimeria_chalumnae
WBGene00007000	tufm-1	84	55.952	ENSLAFG00000028911	TUFM	91	55.952	Loxodonta_africana
WBGene00007000	tufm-1	85	55.792	ENSMFAG00000033739	TUFM	91	55.792	Macaca_fascicularis
WBGene00007000	tufm-1	85	55.792	ENSMMUG00000003303	TUFM	91	55.792	Macaca_mulatta
WBGene00007000	tufm-1	85	55.792	ENSMNEG00000006031	TUFM	91	55.792	Macaca_nemestrina
WBGene00007000	tufm-1	85	55.792	ENSMLEG00000042133	TUFM	91	55.792	Mandrillus_leucophaeus
WBGene00007000	tufm-1	82	57.805	ENSMAMG00000002053	tufm	95	55.324	Mastacembelus_armatus
WBGene00007000	tufm-1	82	57.457	ENSMZEG00005010857	tufm	84	57.457	Maylandia_zebra
WBGene00007000	tufm-1	85	55.035	ENSMAUG00000010490	Tufm	92	55.035	Mesocricetus_auratus
WBGene00007000	tufm-1	85	56.265	ENSMICG00000007650	TUFM	91	56.265	Microcebus_murinus
WBGene00007000	tufm-1	85	55.035	ENSMOCG00000010051	Tufm	92	55.035	Microtus_ochrogaster
WBGene00007000	tufm-1	82	56.265	ENSMMOG00000012344	tufm	89	56.265	Mola_mola
WBGene00007000	tufm-1	86	55.738	ENSMODG00000015564	TUFM	92	55.738	Monodelphis_domestica
WBGene00007000	tufm-1	86	55.581	ENSMALG00000020254	tufm	95	55.581	Monopterus_albus
WBGene00007000	tufm-1	84	56.295	MGP_CAROLIEiJ_G0030449	-	91	56.295	Mus_caroli
WBGene00007000	tufm-1	84	56.295	MGP_CAROLIEiJ_G0030448	-	91	56.295	Mus_caroli
WBGene00007000	tufm-1	84	56.295	ENSMUSG00000073838	Tufm	91	56.295	Mus_musculus
WBGene00007000	tufm-1	84	56.295	MGP_PahariEiJ_G0013658	-	91	56.295	Mus_pahari
WBGene00007000	tufm-1	84	56.295	MGP_PahariEiJ_G0013659	-	91	56.295	Mus_pahari
WBGene00007000	tufm-1	84	56.532	MGP_SPRETEiJ_G0031562	-	91	56.532	Mus_spretus
WBGene00007000	tufm-1	84	52.527	MGP_SPRETEiJ_G0031563	-	92	52.527	Mus_spretus
WBGene00007000	tufm-1	74	54.032	ENSMPUG00000012816	TUFM	98	53.968	Mustela_putorius_furo
WBGene00007000	tufm-1	85	56.028	ENSMLUG00000012335	-	91	56.028	Myotis_lucifugus
WBGene00007000	tufm-1	84	56.057	ENSNGAG00000008610	Tufm	91	56.057	Nannospalax_galili
WBGene00007000	tufm-1	73	56.164	ENSNBRG00000006466	tufm	95	56.164	Neolamprologus_brichardi
WBGene00007000	tufm-1	85	54.610	ENSNLEG00000011063	TUFM	90	54.610	Nomascus_leucogenys
WBGene00007000	tufm-1	71	58.286	ENSMEUG00000011131	TUFM	99	58.286	Notamacropus_eugenii
WBGene00007000	tufm-1	84	46.318	ENSOPRG00000002318	-	90	46.318	Ochotona_princeps
WBGene00007000	tufm-1	82	57.457	ENSONIG00000019389	tufm	90	57.457	Oreochromis_niloticus
WBGene00007000	tufm-1	84	55.189	ENSOANG00000013114	TUFM	94	55.189	Ornithorhynchus_anatinus
WBGene00007000	tufm-1	84	56.086	ENSOCUG00000002683	TUFM	90	56.086	Oryctolagus_cuniculus
WBGene00007000	tufm-1	82	57.946	ENSORLG00000011497	tufm	90	57.946	Oryzias_latipes
WBGene00007000	tufm-1	82	57.946	ENSORLG00020013437	tufm	90	57.946	Oryzias_latipes_hni
WBGene00007000	tufm-1	82	57.946	ENSORLG00015003107	tufm	90	57.946	Oryzias_latipes_hsok
WBGene00007000	tufm-1	85	56.604	ENSOMEG00000016958	tufm	90	58.293	Oryzias_melastigma
WBGene00007000	tufm-1	84	56.667	ENSOGAG00000006875	TUFM	91	56.667	Otolemur_garnettii
WBGene00007000	tufm-1	82	56.691	ENSOARG00000002357	TUFM	97	56.691	Ovis_aries
WBGene00007000	tufm-1	84	56.295	ENSPPAG00000035168	TUFM	91	56.028	Pan_paniscus
WBGene00007000	tufm-1	84	55.792	ENSPPRG00000014248	TUFM	90	55.792	Panthera_pardus
WBGene00007000	tufm-1	84	55.792	ENSPTIG00000009980	TUFM	97	55.792	Panthera_tigris_altaica
WBGene00007000	tufm-1	84	56.295	ENSPTRG00000007939	TUFM	91	56.028	Pan_troglodytes
WBGene00007000	tufm-1	85	55.792	ENSPANG00000019624	TUFM	91	55.792	Papio_anubis
WBGene00007000	tufm-1	80	59.000	ENSPKIG00000023809	tufm	87	59.000	Paramormyrops_kingsleyae
WBGene00007000	tufm-1	62	49.032	ENSPSIG00000005302	TUFM	97	49.032	Pelodiscus_sinensis
WBGene00007000	tufm-1	82	57.421	ENSPMGG00000015631	tufm	95	57.421	Periophthalmus_magnuspinnatus
WBGene00007000	tufm-1	85	55.738	ENSPEMG00000012208	Tufm	92	55.738	Peromyscus_maniculatus_bairdii
WBGene00007000	tufm-1	88	54.462	ENSPCIG00000025208	TUFM	94	54.462	Phascolarctos_cinereus
WBGene00007000	tufm-1	84	56.802	ENSPFOG00000007043	tufm	91	56.802	Poecilia_formosa
WBGene00007000	tufm-1	85	55.792	ENSPLAG00000014372	tufm	93	55.792	Poecilia_latipinna
WBGene00007000	tufm-1	85	56.028	ENSPMEG00000014520	-	86	70.492	Poecilia_mexicana
WBGene00007000	tufm-1	85	55.792	ENSPMEG00000019508	tufm	93	55.792	Poecilia_mexicana
WBGene00007000	tufm-1	84	56.802	ENSPREG00000013913	tufm	90	57.457	Poecilia_reticulata
WBGene00007000	tufm-1	85	56.501	ENSPPYG00000007226	TUFM	91	56.501	Pongo_abelii
WBGene00007000	tufm-1	86	52.546	ENSPCAG00000015294	TUFM	93	52.546	Procavia_capensis
WBGene00007000	tufm-1	85	56.501	ENSPCOG00000012267	TUFM	91	56.501	Propithecus_coquereli
WBGene00007000	tufm-1	82	57.213	ENSPNYG00000008905	tufm	90	57.213	Pundamilia_nyererei
WBGene00007000	tufm-1	82	58.151	ENSPNAG00000018881	tufm	90	58.151	Pygocentrus_nattereri
WBGene00007000	tufm-1	84	56.295	ENSRNOG00000018604	Tufm	91	56.295	Rattus_norvegicus
WBGene00007000	tufm-1	52	50.579	ENSRBIG00000036713	-	93	50.579	Rhinopithecus_bieti
WBGene00007000	tufm-1	79	55.696	ENSRBIG00000042008	-	87	55.696	Rhinopithecus_bieti
WBGene00007000	tufm-1	56	61.372	ENSRROG00000044977	-	73	61.372	Rhinopithecus_roxellana
WBGene00007000	tufm-1	82	56.311	ENSRROG00000036858	-	89	56.311	Rhinopithecus_roxellana
WBGene00007000	tufm-1	80	54.839	YOR187W	TUF1	91	54.839	Saccharomyces_cerevisiae
WBGene00007000	tufm-1	86	55.349	ENSSBOG00000026542	TUFM	93	55.349	Saimiri_boliviensis_boliviensis
WBGene00007000	tufm-1	84	56.220	ENSSHAG00000012121	TUFM	95	56.220	Sarcophilus_harrisii
WBGene00007000	tufm-1	89	54.853	ENSSFOG00015013352	tufm	97	55.479	Scleropages_formosus
WBGene00007000	tufm-1	84	55.944	ENSSMAG00000010053	tufm	94	55.944	Scophthalmus_maximus
WBGene00007000	tufm-1	82	57.702	ENSSDUG00000016896	tufm	90	57.702	Seriola_dumerili
WBGene00007000	tufm-1	86	55.711	ENSSLDG00000006494	tufm	95	55.711	Seriola_lalandi_dorsalis
WBGene00007000	tufm-1	72	58.263	ENSSARG00000011228	TUFM	92	58.263	Sorex_araneus
WBGene00007000	tufm-1	80	50.000	ENSSPUG00000016312	TUFM	91	50.000	Sphenodon_punctatus
WBGene00007000	tufm-1	85	55.792	ENSSPAG00000009936	tufm	95	55.792	Stegastes_partitus
WBGene00007000	tufm-1	85	55.556	ENSSSCG00000007803	TUFM	91	55.556	Sus_scrofa
WBGene00007000	tufm-1	88	54.483	ENSTRUG00000008300	tufm	96	54.483	Takifugu_rubripes
WBGene00007000	tufm-1	83	53.494	ENSTBEG00000015029	TUFM	88	54.217	Tupaia_belangeri
WBGene00007000	tufm-1	54	58.736	ENSTTRG00000001980	-	96	58.736	Tursiops_truncatus
WBGene00007000	tufm-1	51	52.549	ENSTTRG00000005930	-	55	52.549	Tursiops_truncatus
WBGene00007000	tufm-1	84	55.819	ENSUAMG00000001471	TUFM	91	55.819	Ursus_americanus
WBGene00007000	tufm-1	83	56.174	ENSUMAG00000009341	TUFM	99	56.174	Ursus_maritimus
WBGene00007000	tufm-1	54	57.621	ENSVPAG00000009541	TUFM	96	57.621	Vicugna_pacos
WBGene00007000	tufm-1	84	55.609	ENSVVUG00000024170	TUFM	91	55.609	Vulpes_vulpes
WBGene00007000	tufm-1	85	56.501	ENSXMAG00000011848	tufm	95	56.501	Xiphophorus_maculatus