EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00007029 (Gene tree)
Gene ID: -
Gene Symbol: mys-1
Alias: -
Full Name: Histone acetyltransferase Tip60 homolog
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 3126 bases
Position: chrV:7081537-7084662
Accession: Q9TYU5
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
VC5	Tudor-knot	PF11717.8	1.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
VC5.4	-	1607	NM_072395	VC5.4	458 (aa)	NP_504796	Q9TYU5

Gene Model

Click here to download WBGene00007029's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00007029's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00007029	mys-1	76	41.243	WBGene00010537	mys-2	64	41.243

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00007029	mys-1	93	62.092	ENSAPOG00000016436	kat5b	96	51.641	Acanthochromis_polyacanthus
WBGene00007029	mys-1	93	52.444	ENSACIG00000010425	kat5b	98	52.444	Amphilophus_citrinellus
WBGene00007029	mys-1	89	58.407	ENSAOCG00000014287	kat5b	77	58.407	Amphiprion_ocellaris
WBGene00007029	mys-1	93	62.092	ENSAPEG00000001944	kat5b	82	62.092	Amphiprion_percula
WBGene00007029	mys-1	93	62.418	ENSATEG00000016047	kat5b	94	48.975	Anabas_testudineus
WBGene00007029	mys-1	88	59.347	ENSACLG00000015105	kat5b	76	59.347	Astatotilapia_calliptera
WBGene00007029	mys-1	93	61.765	ENSAMXG00000009091	kat5b	81	66.920	Astyanax_mexicanus
WBGene00007029	mys-1	93	53.652	ENSCSAVG00000004784	-	100	51.613	Ciona_savignyi
WBGene00007029	mys-1	90	57.835	ENSCSEG00000014541	kat5b	99	54.195	Cynoglossus_semilaevis
WBGene00007029	mys-1	88	59.644	ENSCVAG00000012685	kat5b	74	59.292	Cyprinodon_variegatus
WBGene00007029	mys-1	93	63.072	ENSDARG00000004587	kat5b	88	63.072	Danio_rerio
WBGene00007029	mys-1	93	61.438	ENSDARG00000045951	kat5b	81	61.438	Danio_rerio
WBGene00007029	mys-1	82	64.935	FBgn0026080	Tip60	64	70.513	Drosophila_melanogaster
WBGene00007029	mys-1	67	47.989	ENSEBUG00000001775	kat5b	98	47.989	Eptatretus_burgeri
WBGene00007029	mys-1	92	51.528	ENSELUG00000016941	kat5b	99	51.528	Esox_lucius
WBGene00007029	mys-1	81	63.072	ENSFHEG00000003516	kat5b	67	63.072	Fundulus_heteroclitus
WBGene00007029	mys-1	88	59.347	ENSGAFG00000004081	kat5b	99	51.220	Gambusia_affinis
WBGene00007029	mys-1	89	58.702	ENSGACG00000020408	kat5b	99	49.686	Gasterosteus_aculeatus
WBGene00007029	mys-1	93	52.772	ENSHBUG00000023213	kat5b	98	52.772	Haplochromis_burtoni
WBGene00007029	mys-1	88	59.941	ENSHCOG00000002064	kat5b	90	57.955	Hippocampus_comes
WBGene00007029	mys-1	93	53.899	ENSIPUG00000014489	kat5b	99	53.899	Ictalurus_punctatus
WBGene00007029	mys-1	90	62.092	ENSKMAG00000009020	kat5b	74	62.092	Kryptolebias_marmoratus
WBGene00007029	mys-1	93	53.256	ENSLBEG00000024629	-	94	53.256	Labrus_bergylta
WBGene00007029	mys-1	93	53.256	ENSLBEG00000011107	-	94	53.256	Labrus_bergylta
WBGene00007029	mys-1	93	62.092	ENSMAMG00000016643	kat5b	99	49.686	Mastacembelus_armatus
WBGene00007029	mys-1	81	62.745	ENSMZEG00005016654	kat5b	67	62.745	Maylandia_zebra
WBGene00007029	mys-1	93	60.855	ENSMMOG00000016639	kat5b	85	60.855	Mola_mola
WBGene00007029	mys-1	93	62.418	ENSMALG00000017235	kat5b	77	62.418	Monopterus_albus
WBGene00007029	mys-1	70	47.059	ENSODEG00000016524	-	93	47.059	Octodon_degus
WBGene00007029	mys-1	81	62.745	ENSONIG00000005359	kat5b	70	62.745	Oreochromis_niloticus
WBGene00007029	mys-1	81	62.745	ENSORLG00000007458	kat5b	66	62.745	Oryzias_latipes
WBGene00007029	mys-1	81	62.745	ENSORLG00020004495	kat5b	68	62.745	Oryzias_latipes_hni
WBGene00007029	mys-1	81	62.745	ENSORLG00015009730	kat5b	66	62.745	Oryzias_latipes_hsok
WBGene00007029	mys-1	90	62.745	ENSOMEG00000002350	kat5b	82	62.745	Oryzias_melastigma
WBGene00007029	mys-1	93	62.092	ENSPKIG00000019383	kat5b	99	48.065	Paramormyrops_kingsleyae
WBGene00007029	mys-1	88	57.225	ENSPMGG00000020103	kat5b	82	62.418	Periophthalmus_magnuspinnatus
WBGene00007029	mys-1	93	46.918	ENSPMAG00000008957	kat5b	98	46.918	Petromyzon_marinus
WBGene00007029	mys-1	88	59.644	ENSPFOG00000010293	kat5b	77	59.644	Poecilia_formosa
WBGene00007029	mys-1	93	63.072	ENSPLAG00000015158	kat5b	81	63.072	Poecilia_latipinna
WBGene00007029	mys-1	94	53.778	ENSPMEG00000008824	kat5b	93	53.778	Poecilia_mexicana
WBGene00007029	mys-1	81	63.072	ENSPREG00000022986	kat5b	67	63.072	Poecilia_reticulata
WBGene00007029	mys-1	88	59.347	ENSPNYG00000017128	kat5b	76	59.347	Pundamilia_nyererei
WBGene00007029	mys-1	93	62.418	ENSPNAG00000003741	-	83	62.418	Pygocentrus_nattereri
WBGene00007029	mys-1	93	61.765	ENSPNAG00000022600	-	96	51.991	Pygocentrus_nattereri
WBGene00007029	mys-1	85	58.065	ENSSHAG00000001928	-	78	58.065	Sarcophilus_harrisii
WBGene00007029	mys-1	93	62.092	ENSSFOG00015005779	kat5	93	58.407	Scleropages_formosus
WBGene00007029	mys-1	81	62.092	ENSSMAG00000013982	kat5b	95	49.790	Scophthalmus_maximus
WBGene00007029	mys-1	88	59.050	ENSSDUG00000010863	kat5b	69	62.418	Seriola_dumerili
WBGene00007029	mys-1	81	62.418	ENSSLDG00000018594	kat5b	62	62.418	Seriola_lalandi_dorsalis
WBGene00007029	mys-1	89	58.407	ENSSPAG00000016282	kat5b	83	58.407	Stegastes_partitus
WBGene00007029	mys-1	89	58.074	ENSTRUG00000016643	kat5b	79	58.074	Takifugu_rubripes
WBGene00007029	mys-1	89	59.706	ENSTNIG00000011743	kat5b	76	59.706	Tetraodon_nigroviridis
WBGene00007029	mys-1	90	52.279	ENSUMAG00000010712	-	84	52.279	Ursus_maritimus
WBGene00007029	mys-1	70	61.508	ENSXETG00000020586	kat5	63	61.508	Xenopus_tropicalis
WBGene00007029	mys-1	93	62.418	ENSXMAG00000005173	kat5b	98	50.422	Xiphophorus_maculatus