EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00007050 (Gene tree)
Gene ID: -
Gene Symbol: utp-20
Alias: tag-184
Full Name: UTP small subunit (SSU) processome component homolog
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 18467 bases
Position: chrII:6536380-6554846
Accession: Q19545
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F18C5	DRIM	PF07539.12	3.1e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F18C5.3	-	8021	NM_001322735	F18C5.3	2613 (aa)	NP_001309494	Q19545

Gene Model

Click here to download WBGene00007050's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00007050's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00007050	utp-20	81	32.026	ENSANAG00000027152	UTP20	80	32.026	Aotus_nancymaae
WBGene00007050	utp-20	76	35.075	ENSAMXG00000021039	utp20	79	35.075	Astyanax_mexicanus
WBGene00007050	utp-20	70	34.000	ENSCPBG00000004844	UTP20	75	34.000	Chrysemys_picta_bellii
WBGene00007050	utp-20	84	34.194	ENSDORG00000014762	Utp20	83	33.117	Dipodomys_ordii
WBGene00007050	utp-20	77	38.938	ENSHGLG00100001086	UTP20	78	38.938	Heterocephalus_glaber_male
WBGene00007050	utp-20	80	35.000	ENSIPUG00000013717	utp20	78	31.928	Ictalurus_punctatus
WBGene00007050	utp-20	70	31.579	ENSLOCG00000015197	utp20	76	31.579	Lepisosteus_oculatus
WBGene00007050	utp-20	74	30.519	ENSLAFG00000012983	UTP20	74	30.519	Loxodonta_africana
WBGene00007050	utp-20	80	31.818	ENSMLEG00000029148	UTP20	78	31.818	Mandrillus_leucophaeus
WBGene00007050	utp-20	84	35.220	ENSMODG00000003141	UTP20	83	35.220	Monodelphis_domestica
WBGene00007050	utp-20	61	32.258	ENSNBRG00000019464	utp20	80	30.000	Neolamprologus_brichardi
WBGene00007050	utp-20	84	32.258	ENSONIG00000009910	utp20	85	32.468	Oreochromis_niloticus
WBGene00007050	utp-20	87	34.177	ENSPCIG00000009298	UTP20	86	34.177	Phascolarctos_cinereus
WBGene00007050	utp-20	79	31.405	ENSPCOG00000024948	UTP20	83	31.405	Propithecus_coquereli
WBGene00007050	utp-20	85	32.258	ENSPNYG00000011561	utp20	79	32.468	Pundamilia_nyererei
WBGene00007050	utp-20	80	33.548	ENSSPAG00000014674	utp20	77	33.766	Stegastes_partitus
WBGene00007050	utp-20	81	33.333	ENSTTRG00000017195	UTP20	63	33.333	Tursiops_truncatus