EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00007067 (Gene tree)
Gene ID: -
Gene Symbol: 4R79.2
Alias: -
Full Name: Rab-44
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 2937 bases
Position: chrIV:17480396-17483332
Accession: I7EVL8
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
4R79	GTP_EFTU	PF00009.27	2.5e-07	1	1
4R79	GTP_EFTU	PF00009.27	5.9e-07	1	1
4R79	MMR_HSR1	PF01926.23	2.5e-05	1	1
4R79	MMR_HSR1	PF01926.23	3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
4R79.2a	-	1190	NM_001269037	4R79.2a	395 (aa)	NP_001255966	I7EVL8
4R79.2b	-	936	NM_001269038	4R79.2b	311 (aa)	NP_001255967	D3NQA2

Gene Model

Click here to download WBGene00007067's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00007067's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00007067	4R79.2	56	30.857	WBGene00004309	rap-3	82	30.857
WBGene00007067	4R79.2	56	34.091	WBGene00004276	rab-14	82	34.091
WBGene00007067	4R79.2	53	39.181	WBGene00004282	rab-30	75	39.181
WBGene00007067	4R79.2	55	35.429	WBGene00004286	rab-39	75	35.429
WBGene00007067	4R79.2	65	30.622	WBGene00004279	rab-21	99	30.622
WBGene00007067	4R79.2	56	35.196	WBGene00004271	rab-7	98	32.367
WBGene00007067	4R79.2	54	41.420	WBGene00004270	rab-6.2	80	41.420
WBGene00007067	4R79.2	58	34.615	WBGene00004277	rab-18	87	34.615
WBGene00007067	4R79.2	59	37.297	WBGene00006833	unc-108	82	37.297
WBGene00007067	4R79.2	55	38.012	WBGene00004266	rab-1	81	38.953
WBGene00007067	4R79.2	54	33.333	WBGene00004268	rab-5	80	33.333
WBGene00007067	4R79.2	53	40.606	WBGene00004269	rab-6.1	79	40.606
WBGene00007067	4R79.2	63	34.762	WBGene00019317	K02E10.1	94	34.762

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00007067	4R79.2	54	42.012	ENSGMOG00000017644	si:ch211-247i17.1	95	42.012	Gadus_morhua
WBGene00007067	4R79.2	56	42.529	ENSGACG00000005397	si:ch211-247i17.1	98	42.529	Gasterosteus_aculeatus
WBGene00007067	4R79.2	54	57.485	ENSMGAG00000009012	-	96	57.485	Meleagris_gallopavo
WBGene00007067	4R79.2	55	50.292	ENSPSIG00000012698	-	99	50.292	Pelodiscus_sinensis
WBGene00007067	4R79.2	55	54.971	ENSTGUG00000009776	-	97	54.971	Taeniopygia_guttata
WBGene00007067	4R79.2	54	44.970	ENSTNIG00000001043	si:ch211-247i17.1	81	44.970	Tetraodon_nigroviridis