EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00007355 (Gene tree)
Gene ID: -
Gene Symbol: rpb-6
Alias: -
Full Name: Probable DNA-directed RNA polymerases I%2C II%2C and III subunit RPABC2
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 590 bases
Position: chrII:10579366-10579955
Accession: Q17684
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
C06A1	RNA_pol_Rpb6	PF01192.22	9.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
C06A1.5	-	590	NM_063877	C06A1.5	137 (aa)	NP_496278	Q17684

Gene Model

Click here to download WBGene00007355's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00007355's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00007355	rpb-6	68	70.213	ENSG00000100142	POLR2F	66	81.081	Homo_sapiens
WBGene00007355	rpb-6	74	67.961	ENSAPOG00000002902	polr2f	64	77.778	Acanthochromis_polyacanthus
WBGene00007355	rpb-6	68	70.213	ENSAMEG00000010331	POLR2F	63	77.500	Ailuropoda_melanoleuca
WBGene00007355	rpb-6	73	68.317	ENSACIG00000000923	polr2f	63	77.500	Amphilophus_citrinellus
WBGene00007355	rpb-6	74	66.990	ENSAOCG00000003182	polr2f	63	77.500	Amphiprion_ocellaris
WBGene00007355	rpb-6	74	66.990	ENSAPEG00000012999	polr2f	63	77.500	Amphiprion_percula
WBGene00007355	rpb-6	73	68.317	ENSATEG00000008929	polr2f	63	77.500	Anabas_testudineus
WBGene00007355	rpb-6	68	70.213	ENSAPLG00000015235	POLR2F	67	73.810	Anas_platyrhynchos
WBGene00007355	rpb-6	68	70.213	ENSACAG00000015288	POLR2F	63	77.500	Anolis_carolinensis
WBGene00007355	rpb-6	68	70.213	ENSANAG00000020840	POLR2F	66	77.500	Aotus_nancymaae
WBGene00007355	rpb-6	73	68.317	ENSACLG00000016129	polr2f	63	77.500	Astatotilapia_calliptera
WBGene00007355	rpb-6	74	66.990	ENSAMXG00000012812	polr2f	63	77.500	Astyanax_mexicanus
WBGene00007355	rpb-6	68	70.213	ENSBTAG00000004820	POLR2F	63	77.500	Bos_taurus
WBGene00007355	rpb-6	68	70.213	ENSCJAG00000048241	POLR2F	66	77.500	Callithrix_jacchus
WBGene00007355	rpb-6	68	70.213	ENSCAFG00000001437	POLR2F	63	77.500	Canis_familiaris
WBGene00007355	rpb-6	68	70.213	ENSCHIG00000012907	POLR2F	63	77.500	Capra_hircus
WBGene00007355	rpb-6	68	70.213	ENSTSYG00000008187	POLR2F	63	77.500	Carlito_syrichta
WBGene00007355	rpb-6	68	70.213	ENSCAPG00000013419	POLR2F	63	77.500	Cavia_aperea
WBGene00007355	rpb-6	68	70.213	ENSCPOG00000034094	POLR2F	63	77.500	Cavia_porcellus
WBGene00007355	rpb-6	68	70.213	ENSCCAG00000036489	POLR2F	63	77.500	Cebus_capucinus
WBGene00007355	rpb-6	68	70.213	ENSCATG00000041014	POLR2F	66	77.500	Cercocebus_atys
WBGene00007355	rpb-6	68	70.213	ENSCLAG00000017167	POLR2F	63	77.500	Chinchilla_lanigera
WBGene00007355	rpb-6	68	70.213	ENSCSAG00000006862	POLR2F	63	77.500	Chlorocebus_sabaeus
WBGene00007355	rpb-6	69	61.458	ENSCING00000019359	-	62	65.517	Ciona_intestinalis
WBGene00007355	rpb-6	68	70.213	ENSCANG00000041884	POLR2F	66	77.500	Colobus_angolensis_palliatus
WBGene00007355	rpb-6	68	70.213	ENSCGRG00001023541	POLR2F	63	77.500	Cricetulus_griseus_chok1gshd
WBGene00007355	rpb-6	68	70.213	ENSCGRG00000011921	POLR2F	63	77.500	Cricetulus_griseus_crigri
WBGene00007355	rpb-6	74	66.990	ENSCSEG00000006848	polr2f	63	77.500	Cynoglossus_semilaevis
WBGene00007355	rpb-6	92	60.630	ENSCVAG00000010437	polr2f	63	77.500	Cyprinodon_variegatus
WBGene00007355	rpb-6	74	66.019	ENSDARG00000036625	polr2f	63	76.250	Danio_rerio
WBGene00007355	rpb-6	68	70.213	ENSDNOG00000005884	POLR2F	63	77.500	Dasypus_novemcinctus
WBGene00007355	rpb-6	68	70.213	ENSDORG00000024789	Polr2f	63	77.500	Dipodomys_ordii
WBGene00007355	rpb-6	75	64.078	FBgn0003275	RpII18	65	72.941	Drosophila_melanogaster
WBGene00007355	rpb-6	56	72.727	ENSEBUG00000002842	-	67	72.727	Eptatretus_burgeri
WBGene00007355	rpb-6	68	65.591	ENSEEUG00000011014	POLR2F	62	73.750	Erinaceus_europaeus
WBGene00007355	rpb-6	73	68.317	ENSELUG00000000319	polr2f	63	77.500	Esox_lucius
WBGene00007355	rpb-6	68	70.213	ENSFCAG00000002806	POLR2F	66	77.500	Felis_catus
WBGene00007355	rpb-6	68	70.213	ENSFDAG00000009926	POLR2F	63	77.500	Fukomys_damarensis
WBGene00007355	rpb-6	74	66.990	ENSFHEG00000005448	polr2f	63	77.500	Fundulus_heteroclitus
WBGene00007355	rpb-6	98	55.970	ENSGMOG00000009967	polr2f	63	75.000	Gadus_morhua
WBGene00007355	rpb-6	68	70.213	ENSGALG00000012291	POLR2F	66	73.810	Gallus_gallus
WBGene00007355	rpb-6	92	60.630	ENSGAFG00000017573	polr2f	63	77.500	Gambusia_affinis
WBGene00007355	rpb-6	92	61.417	ENSGACG00000007322	polr2f	61	79.487	Gasterosteus_aculeatus
WBGene00007355	rpb-6	68	70.213	ENSGAGG00000021757	POLR2F	63	77.500	Gopherus_agassizii
WBGene00007355	rpb-6	68	70.213	ENSGGOG00000005213	POLR2F	66	77.500	Gorilla_gorilla
WBGene00007355	rpb-6	73	68.317	ENSHBUG00000022089	polr2f	63	77.500	Haplochromis_burtoni
WBGene00007355	rpb-6	68	70.213	ENSHGLG00000018942	POLR2F	63	77.500	Heterocephalus_glaber_female
WBGene00007355	rpb-6	68	70.213	ENSHGLG00100012851	POLR2F	63	77.500	Heterocephalus_glaber_male
WBGene00007355	rpb-6	73	65.347	ENSHCOG00000006149	polr2f	63	73.750	Hippocampus_comes
WBGene00007355	rpb-6	68	69.149	ENSIPUG00000000814	polr2f	82	77.500	Ictalurus_punctatus
WBGene00007355	rpb-6	68	70.213	ENSSTOG00000025722	POLR2F	63	77.500	Ictidomys_tridecemlineatus
WBGene00007355	rpb-6	68	70.213	ENSJJAG00000008097	Polr2f	63	77.500	Jaculus_jaculus
WBGene00007355	rpb-6	76	65.714	ENSKMAG00000014230	polr2f	63	77.500	Kryptolebias_marmoratus
WBGene00007355	rpb-6	76	63.810	ENSLBEG00000008383	polr2f	66	75.000	Labrus_bergylta
WBGene00007355	rpb-6	76	66.667	ENSLACG00000003931	POLR2F	63	77.500	Latimeria_chalumnae
WBGene00007355	rpb-6	68	69.149	ENSLOCG00000011827	polr2f	62	77.500	Lepisosteus_oculatus
WBGene00007355	rpb-6	68	70.213	ENSLAFG00000012632	POLR2F	63	77.500	Loxodonta_africana
WBGene00007355	rpb-6	68	70.213	ENSMFAG00000033687	POLR2F	66	77.500	Macaca_fascicularis
WBGene00007355	rpb-6	68	70.213	ENSMMUG00000038231	POLR2F	66	77.500	Macaca_mulatta
WBGene00007355	rpb-6	68	70.213	ENSMNEG00000044365	POLR2F	66	77.500	Macaca_nemestrina
WBGene00007355	rpb-6	68	70.213	ENSMLEG00000033077	POLR2F	66	77.500	Mandrillus_leucophaeus
WBGene00007355	rpb-6	76	64.762	ENSMAMG00000008056	polr2f	63	77.500	Mastacembelus_armatus
WBGene00007355	rpb-6	73	68.317	ENSMZEG00005005705	polr2f	63	77.500	Maylandia_zebra
WBGene00007355	rpb-6	68	70.213	ENSMGAG00000012504	POLR2F	66	73.810	Meleagris_gallopavo
WBGene00007355	rpb-6	68	70.213	ENSMAUG00000018586	Polr2f	63	77.500	Mesocricetus_auratus
WBGene00007355	rpb-6	68	70.213	ENSMICG00000013128	POLR2F	66	77.500	Microcebus_murinus
WBGene00007355	rpb-6	68	70.213	ENSMOCG00000000237	Polr2f	63	77.500	Microtus_ochrogaster
WBGene00007355	rpb-6	74	66.990	ENSMMOG00000005106	polr2f	63	77.500	Mola_mola
WBGene00007355	rpb-6	68	70.213	ENSMODG00000019063	POLR2F	63	77.500	Monodelphis_domestica
WBGene00007355	rpb-6	74	67.961	ENSMALG00000001444	polr2f	63	78.750	Monopterus_albus
WBGene00007355	rpb-6	68	70.213	MGP_CAROLIEiJ_G0020006	Polr2f	63	77.500	Mus_caroli
WBGene00007355	rpb-6	68	70.213	ENSMUSG00000033020	Polr2f	63	77.500	Mus_musculus
WBGene00007355	rpb-6	68	70.213	MGP_PahariEiJ_G0020008	Polr2f	63	77.500	Mus_pahari
WBGene00007355	rpb-6	68	70.213	MGP_SPRETEiJ_G0020904	Polr2f	63	77.500	Mus_spretus
WBGene00007355	rpb-6	68	70.213	ENSMPUG00000012997	POLR2F	63	77.500	Mustela_putorius_furo
WBGene00007355	rpb-6	65	70.000	ENSMLUG00000029612	-	58	80.822	Myotis_lucifugus
WBGene00007355	rpb-6	68	67.708	ENSMLUG00000014315	-	64	74.390	Myotis_lucifugus
WBGene00007355	rpb-6	68	70.213	ENSNGAG00000020682	Polr2f	63	77.500	Nannospalax_galili
WBGene00007355	rpb-6	73	68.317	ENSNBRG00000002492	polr2f	63	77.500	Neolamprologus_brichardi
WBGene00007355	rpb-6	68	70.213	ENSNLEG00000014987	-	66	77.500	Nomascus_leucogenys
WBGene00007355	rpb-6	68	70.213	ENSODEG00000014123	POLR2F	63	77.500	Octodon_degus
WBGene00007355	rpb-6	73	68.317	ENSONIG00000008394	polr2f	63	77.500	Oreochromis_niloticus
WBGene00007355	rpb-6	68	70.213	ENSOANG00000014684	POLR2F	63	77.500	Ornithorhynchus_anatinus
WBGene00007355	rpb-6	68	70.213	ENSOCUG00000012064	POLR2F	63	77.500	Oryctolagus_cuniculus
WBGene00007355	rpb-6	92	60.630	ENSORLG00000014580	polr2f	63	77.500	Oryzias_latipes
WBGene00007355	rpb-6	92	60.630	ENSORLG00020006910	polr2f	63	77.500	Oryzias_latipes_hni
WBGene00007355	rpb-6	68	70.213	ENSOGAG00000025463	POLR2F	63	77.500	Otolemur_garnettii
WBGene00007355	rpb-6	68	70.213	ENSOARG00000014692	POLR2F	63	77.500	Ovis_aries
WBGene00007355	rpb-6	68	70.213	ENSPPAG00000024276	POLR2F	66	77.500	Pan_paniscus
WBGene00007355	rpb-6	68	70.213	ENSPPRG00000013030	POLR2F	66	77.500	Panthera_pardus
WBGene00007355	rpb-6	68	70.213	ENSPTIG00000000632	POLR2F	67	77.500	Panthera_tigris_altaica
WBGene00007355	rpb-6	68	70.213	ENSPTRG00000014356	POLR2F	66	77.500	Pan_troglodytes
WBGene00007355	rpb-6	68	70.213	ENSPANG00000023979	POLR2F	66	77.500	Papio_anubis
WBGene00007355	rpb-6	74	66.990	ENSPKIG00000002464	polr2f	63	77.500	Paramormyrops_kingsleyae
WBGene00007355	rpb-6	52	83.099	ENSPSIG00000013913	POLR2F	100	83.099	Pelodiscus_sinensis
WBGene00007355	rpb-6	74	66.990	ENSPMGG00000009619	polr2f	63	77.500	Periophthalmus_magnuspinnatus
WBGene00007355	rpb-6	68	70.213	ENSPEMG00000008322	Polr2f	63	77.500	Peromyscus_maniculatus_bairdii
WBGene00007355	rpb-6	68	70.213	ENSPCIG00000012000	-	63	77.500	Phascolarctos_cinereus
WBGene00007355	rpb-6	92	60.630	ENSPFOG00000000139	polr2f	63	77.500	Poecilia_formosa
WBGene00007355	rpb-6	92	60.630	ENSPLAG00000000988	polr2f	63	77.500	Poecilia_latipinna
WBGene00007355	rpb-6	92	60.630	ENSPMEG00000019063	polr2f	63	77.500	Poecilia_mexicana
WBGene00007355	rpb-6	71	58.163	ENSPREG00000016749	polr2f	52	82.353	Poecilia_reticulata
WBGene00007355	rpb-6	68	70.213	ENSPPYG00000011809	POLR2F	63	77.500	Pongo_abelii
WBGene00007355	rpb-6	68	70.213	ENSPCOG00000025716	POLR2F	66	77.500	Propithecus_coquereli
WBGene00007355	rpb-6	73	68.317	ENSPNYG00000019790	polr2f	63	77.500	Pundamilia_nyererei
WBGene00007355	rpb-6	74	66.990	ENSPNAG00000009017	polr2f	63	77.500	Pygocentrus_nattereri
WBGene00007355	rpb-6	68	70.213	ENSRNOG00000011214	Polr2f	63	77.500	Rattus_norvegicus
WBGene00007355	rpb-6	68	70.213	ENSRBIG00000044878	POLR2F	66	77.500	Rhinopithecus_bieti
WBGene00007355	rpb-6	68	70.213	ENSRROG00000019586	POLR2F	66	77.500	Rhinopithecus_roxellana
WBGene00007355	rpb-6	93	48.951	YPR187W	RPO26	52	67.500	Saccharomyces_cerevisiae
WBGene00007355	rpb-6	68	70.213	ENSSBOG00000023340	POLR2F	66	77.500	Saimiri_boliviensis_boliviensis
WBGene00007355	rpb-6	68	70.213	ENSSHAG00000008502	POLR2F	63	77.500	Sarcophilus_harrisii
WBGene00007355	rpb-6	73	68.317	ENSSFOG00015012810	polr2f	63	77.500	Scleropages_formosus
WBGene00007355	rpb-6	74	66.990	ENSSMAG00000005354	polr2f	63	77.500	Scophthalmus_maximus
WBGene00007355	rpb-6	74	66.990	ENSSDUG00000016273	polr2f	63	77.500	Seriola_dumerili
WBGene00007355	rpb-6	74	66.990	ENSSLDG00000024895	polr2f	63	77.500	Seriola_lalandi_dorsalis
WBGene00007355	rpb-6	68	70.213	ENSSPUG00000011343	POLR2F	63	77.500	Sphenodon_punctatus
WBGene00007355	rpb-6	73	68.317	ENSSPAG00000019646	polr2f	63	77.500	Stegastes_partitus
WBGene00007355	rpb-6	68	70.213	ENSSSCG00000000116	POLR2F	63	77.500	Sus_scrofa
WBGene00007355	rpb-6	68	70.213	ENSTGUG00000010476	POLR2F	58	77.500	Taeniopygia_guttata
WBGene00007355	rpb-6	74	66.990	ENSTNIG00000010827	polr2f	63	77.500	Tetraodon_nigroviridis
WBGene00007355	rpb-6	68	70.213	ENSUAMG00000020504	POLR2F	63	77.500	Ursus_americanus
WBGene00007355	rpb-6	68	70.213	ENSUMAG00000015052	POLR2F	63	77.500	Ursus_maritimus
WBGene00007355	rpb-6	68	70.213	ENSVVUG00000024021	POLR2F	61	77.500	Vulpes_vulpes
WBGene00007355	rpb-6	76	64.762	ENSXETG00000006346	polr2f	63	76.250	Xenopus_tropicalis
WBGene00007355	rpb-6	92	60.630	ENSXCOG00000015983	polr2f	63	77.500	Xiphophorus_couchianus
WBGene00007355	rpb-6	92	60.630	ENSXMAG00000001559	polr2f	63	77.500	Xiphophorus_maculatus