EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00007412 (Gene tree)
Gene ID: -
Gene Symbol: stip-1
Alias: stip
Full Name: Septin and tuftelin-interacting protein 1 homolog
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 3027 bases
Position: chrII:10346981-10350007
Accession: Q17784
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
C07E3	G-patch	PF01585.23	1.4e-15	1	1
C07E3	G-patch	PF01585.23	1.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
C07E3.1a.1	-	2553	NM_063825	C07E3.1a.1	830 (aa)	NP_496226	Q17784
C07E3.1a.2	-	2655	NM_063825	C07E3.1a.2	830 (aa)	NP_496226	Q17784
C07E3.1b	-	382	-	C07E3.1b	65 (aa)	NP_496227	Q9U3R2

Gene Model

Click here to download WBGene00007412's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00007412's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00007412	stip-1	99	31.452	ENSG00000100109	TFIP11	98	31.886	Homo_sapiens
WBGene00007412	stip-1	98	31.702	ENSAPOG00000011350	tfip11	98	31.940	Acanthochromis_polyacanthus
WBGene00007412	stip-1	99	31.585	ENSAMEG00000018077	TFIP11	98	31.886	Ailuropoda_melanoleuca
WBGene00007412	stip-1	98	31.813	ENSACIG00000020016	tfip11	98	32.292	Amphilophus_citrinellus
WBGene00007412	stip-1	98	31.382	ENSAOCG00000014412	tfip11	98	31.750	Amphiprion_ocellaris
WBGene00007412	stip-1	98	31.499	ENSAPEG00000021837	tfip11	98	31.866	Amphiprion_percula
WBGene00007412	stip-1	99	31.671	ENSATEG00000006472	tfip11	99	31.761	Anabas_testudineus
WBGene00007412	stip-1	83	30.685	ENSAPLG00000012229	TFIP11	95	30.453	Anas_platyrhynchos
WBGene00007412	stip-1	99	31.106	ENSANAG00000036330	TFIP11	98	31.657	Aotus_nancymaae
WBGene00007412	stip-1	98	32.254	ENSACLG00000001959	tfip11	98	32.488	Astatotilapia_calliptera
WBGene00007412	stip-1	98	30.286	ENSAMXG00000018840	tfip11	97	30.612	Astyanax_mexicanus
WBGene00007412	stip-1	99	31.364	ENSBTAG00000012288	TFIP11	98	31.886	Bos_taurus
WBGene00007412	stip-1	99	30.813	ENSCJAG00000008628	TFIP11	98	31.657	Callithrix_jacchus
WBGene00007412	stip-1	99	31.886	ENSCAFG00000011741	TFIP11	98	32.114	Canis_familiaris
WBGene00007412	stip-1	99	31.886	ENSCAFG00020022398	TFIP11	98	32.114	Canis_lupus_dingo
WBGene00007412	stip-1	99	31.932	ENSCHIG00000017173	TFIP11	98	32.114	Capra_hircus
WBGene00007412	stip-1	99	31.585	ENSTSYG00000011768	TFIP11	98	31.891	Carlito_syrichta
WBGene00007412	stip-1	99	31.735	ENSCPOG00000000358	TFIP11	98	31.963	Cavia_porcellus
WBGene00007412	stip-1	99	31.106	ENSCCAG00000022675	TFIP11	98	31.657	Cebus_capucinus
WBGene00007412	stip-1	99	31.336	ENSCATG00000040954	TFIP11	98	31.771	Cercocebus_atys
WBGene00007412	stip-1	99	31.336	ENSCLAG00000007269	TFIP11	98	32.000	Chinchilla_lanigera
WBGene00007412	stip-1	99	31.336	ENSCSAG00000010084	TFIP11	98	31.771	Chlorocebus_sabaeus
WBGene00007412	stip-1	85	31.851	ENSCHOG00000008730	TFIP11	84	32.206	Choloepus_hoffmanni
WBGene00007412	stip-1	99	30.334	ENSCPBG00000021598	TFIP11	99	30.265	Chrysemys_picta_bellii
WBGene00007412	stip-1	99	30.310	ENSCING00000008698	stip	99	30.035	Ciona_intestinalis
WBGene00007412	stip-1	99	31.336	ENSCANG00000002400	TFIP11	98	31.771	Colobus_angolensis_palliatus
WBGene00007412	stip-1	99	31.034	ENSCGRG00001013439	Tfip11	98	31.034	Cricetulus_griseus_chok1gshd
WBGene00007412	stip-1	99	31.034	ENSCGRG00000000420	Tfip11	98	31.034	Cricetulus_griseus_crigri
WBGene00007412	stip-1	99	31.090	ENSCSEG00000014082	tfip11	97	31.866	Cynoglossus_semilaevis
WBGene00007412	stip-1	99	32.172	ENSCVAG00000011674	tfip11	97	32.558	Cyprinodon_variegatus
WBGene00007412	stip-1	98	30.876	ENSDARG00000056932	tfip11	98	31.429	Danio_rerio
WBGene00007412	stip-1	99	31.086	ENSDNOG00000042556	TFIP11	98	31.314	Dasypus_novemcinctus
WBGene00007412	stip-1	99	31.471	ENSDORG00000006263	Tfip11	98	31.881	Dipodomys_ordii
WBGene00007412	stip-1	99	31.221	FBgn0024191	sip1	99	31.373	Drosophila_melanogaster
WBGene00007412	stip-1	99	30.230	ENSEBUG00000015059	tfip11	96	31.695	Eptatretus_burgeri
WBGene00007412	stip-1	99	31.336	ENSEASG00005009760	-	98	31.886	Equus_asinus_asinus
WBGene00007412	stip-1	99	31.343	ENSECAG00000016242	-	98	31.891	Equus_caballus
WBGene00007412	stip-1	99	30.114	ENSECAG00000004795	-	98	30.341	Equus_caballus
WBGene00007412	stip-1	92	30.186	ENSEEUG00000015847	TFIP11	99	30.635	Erinaceus_europaeus
WBGene00007412	stip-1	99	30.415	ENSELUG00000022017	tfip11	99	30.991	Esox_lucius
WBGene00007412	stip-1	99	30.254	ENSELUG00000011596	TFIP11	99	30.805	Esox_lucius
WBGene00007412	stip-1	99	31.771	ENSFCAG00000031626	TFIP11	98	32.000	Felis_catus
WBGene00007412	stip-1	99	31.228	ENSFALG00000008481	-	99	31.034	Ficedula_albicollis
WBGene00007412	stip-1	99	31.149	ENSFDAG00000016663	TFIP11	98	31.379	Fukomys_damarensis
WBGene00007412	stip-1	99	31.750	ENSFHEG00000011548	tfip11	98	31.954	Fundulus_heteroclitus
WBGene00007412	stip-1	99	31.834	ENSGMOG00000004834	tfip11	99	32.404	Gadus_morhua
WBGene00007412	stip-1	99	30.805	ENSGALG00000005623	TFIP11	99	30.955	Gallus_gallus
WBGene00007412	stip-1	99	31.524	ENSGAFG00000012142	tfip11	98	31.257	Gambusia_affinis
WBGene00007412	stip-1	99	30.769	ENSGACG00000009599	tfip11	98	31.488	Gasterosteus_aculeatus
WBGene00007412	stip-1	99	30.690	ENSGAGG00000008196	TFIP11	99	30.380	Gopherus_agassizii
WBGene00007412	stip-1	99	31.452	ENSGGOG00000004999	TFIP11	98	31.886	Gorilla_gorilla
WBGene00007412	stip-1	98	32.370	ENSHBUG00000009935	tfip11	98	32.604	Haplochromis_burtoni
WBGene00007412	stip-1	99	31.314	ENSHGLG00000008873	TFIP11	98	31.543	Heterocephalus_glaber_female
WBGene00007412	stip-1	99	31.314	ENSHGLG00100016817	TFIP11	98	31.543	Heterocephalus_glaber_male
WBGene00007412	stip-1	99	31.185	ENSHCOG00000015846	tfip11	98	31.651	Hippocampus_comes
WBGene00007412	stip-1	98	30.617	ENSIPUG00000011965	tfip11	98	30.380	Ictalurus_punctatus
WBGene00007412	stip-1	99	32.213	ENSKMAG00000013948	tfip11	98	31.739	Kryptolebias_marmoratus
WBGene00007412	stip-1	99	31.243	ENSLBEG00000014079	tfip11	98	31.972	Labrus_bergylta
WBGene00007412	stip-1	99	31.127	ENSLACG00000009243	TFIP11	98	30.760	Latimeria_chalumnae
WBGene00007412	stip-1	98	30.886	ENSLOCG00000008684	tfip11	97	30.742	Lepisosteus_oculatus
WBGene00007412	stip-1	99	31.336	ENSMFAG00000043406	TFIP11	98	31.771	Macaca_fascicularis
WBGene00007412	stip-1	99	31.336	ENSMMUG00000023446	TFIP11	98	31.771	Macaca_mulatta
WBGene00007412	stip-1	92	30.665	ENSMNEG00000039522	TFIP11	99	31.181	Macaca_nemestrina
WBGene00007412	stip-1	99	31.336	ENSMLEG00000039426	TFIP11	98	31.771	Mandrillus_leucophaeus
WBGene00007412	stip-1	99	30.966	ENSMAMG00000013817	tfip11	99	31.693	Mastacembelus_armatus
WBGene00007412	stip-1	98	32.254	ENSMZEG00005016814	tfip11	98	32.488	Maylandia_zebra
WBGene00007412	stip-1	99	31.149	ENSMAUG00000016136	Tfip11	98	31.149	Mesocricetus_auratus
WBGene00007412	stip-1	99	31.114	ENSMICG00000013732	TFIP11	98	31.228	Microcebus_murinus
WBGene00007412	stip-1	99	31.200	ENSMOCG00000021195	Tfip11	98	31.458	Microtus_ochrogaster
WBGene00007412	stip-1	98	30.380	ENSMMOG00000017940	tfip11	98	31.178	Mola_mola
WBGene00007412	stip-1	98	30.268	ENSMODG00000010710	TFIP11	98	30.610	Monodelphis_domestica
WBGene00007412	stip-1	99	32.254	ENSMALG00000011938	tfip11	98	32.793	Monopterus_albus
WBGene00007412	stip-1	99	30.983	MGP_CAROLIEiJ_G0027562	Tfip11	98	31.494	Mus_caroli
WBGene00007412	stip-1	99	31.098	ENSMUSG00000029345	Tfip11	98	31.609	Mus_musculus
WBGene00007412	stip-1	99	30.840	MGP_PahariEiJ_G0024144	-	98	31.157	Mus_pahari
WBGene00007412	stip-1	99	31.098	MGP_SPRETEiJ_G0028560	Tfip11	98	31.609	Mus_spretus
WBGene00007412	stip-1	97	31.935	ENSMPUG00000013605	TFIP11	91	32.201	Mustela_putorius_furo
WBGene00007412	stip-1	99	31.250	ENSMLUG00000008015	TFIP11	98	31.543	Myotis_lucifugus
WBGene00007412	stip-1	99	31.573	ENSNGAG00000001168	Tfip11	98	31.803	Nannospalax_galili
WBGene00007412	stip-1	98	32.442	ENSNBRG00000005227	tfip11	98	32.445	Neolamprologus_brichardi
WBGene00007412	stip-1	99	30.876	ENSNLEG00000007735	TFIP11	98	31.314	Nomascus_leucogenys
WBGene00007412	stip-1	98	30.501	ENSMEUG00000006642	TFIP11	98	30.840	Notamacropus_eugenii
WBGene00007412	stip-1	58	36.364	ENSOPRG00000013740	TFIP11	64	32.308	Ochotona_princeps
WBGene00007412	stip-1	99	31.336	ENSODEG00000017086	TFIP11	98	31.886	Octodon_degus
WBGene00007412	stip-1	98	32.239	ENSONIG00000013652	tfip11	98	32.370	Oreochromis_niloticus
WBGene00007412	stip-1	99	30.939	ENSOCUG00000006298	TFIP11	98	31.379	Oryctolagus_cuniculus
WBGene00007412	stip-1	99	30.716	ENSORLG00000008318	tfip11	98	30.814	Oryzias_latipes
WBGene00007412	stip-1	99	31.501	ENSORLG00020012182	tfip11	98	31.834	Oryzias_latipes_hni
WBGene00007412	stip-1	99	31.501	ENSORLG00015001303	tfip11	98	31.834	Oryzias_latipes_hsok
WBGene00007412	stip-1	99	30.840	ENSOMEG00000000088	tfip11	99	31.579	Oryzias_melastigma
WBGene00007412	stip-1	99	31.221	ENSOGAG00000010584	-	98	31.771	Otolemur_garnettii
WBGene00007412	stip-1	99	31.114	ENSOARG00000001236	TFIP11	98	31.343	Ovis_aries
WBGene00007412	stip-1	99	31.452	ENSPPAG00000037529	TFIP11	98	31.886	Pan_paniscus
WBGene00007412	stip-1	99	31.771	ENSPPRG00000010373	TFIP11	98	32.000	Panthera_pardus
WBGene00007412	stip-1	99	31.771	ENSPTIG00000005731	TFIP11	98	32.000	Panthera_tigris_altaica
WBGene00007412	stip-1	99	31.452	ENSPTRG00000014196	TFIP11	98	31.886	Pan_troglodytes
WBGene00007412	stip-1	99	31.336	ENSPANG00000018711	TFIP11	98	31.771	Papio_anubis
WBGene00007412	stip-1	99	31.579	ENSPKIG00000024728	tfip11	98	31.501	Paramormyrops_kingsleyae
WBGene00007412	stip-1	99	30.681	ENSPSIG00000009979	TFIP11	99	30.370	Pelodiscus_sinensis
WBGene00007412	stip-1	99	31.149	ENSPEMG00000009979	Tfip11	98	31.766	Peromyscus_maniculatus_bairdii
WBGene00007412	stip-1	99	31.257	ENSPMAG00000005546	tfip11	99	31.778	Petromyzon_marinus
WBGene00007412	stip-1	98	30.384	ENSPCIG00000020963	TFIP11	98	30.725	Phascolarctos_cinereus
WBGene00007412	stip-1	99	31.555	ENSPFOG00000016485	tfip11	98	31.682	Poecilia_formosa
WBGene00007412	stip-1	99	31.555	ENSPLAG00000003258	tfip11	98	31.682	Poecilia_latipinna
WBGene00007412	stip-1	99	31.761	ENSPMEG00000008257	tfip11	98	31.719	Poecilia_mexicana
WBGene00007412	stip-1	99	31.876	ENSPREG00000001742	tfip11	98	31.834	Poecilia_reticulata
WBGene00007412	stip-1	90	32.179	ENSPCAG00000005912	TFIP11	89	33.128	Procavia_capensis
WBGene00007412	stip-1	99	31.314	ENSPCOG00000027919	TFIP11	98	31.458	Propithecus_coquereli
WBGene00007412	stip-1	98	31.912	ENSPNYG00000018025	tfip11	98	32.488	Pundamilia_nyererei
WBGene00007412	stip-1	99	30.971	ENSPNAG00000015368	tfip11	99	30.963	Pygocentrus_nattereri
WBGene00007412	stip-1	99	31.264	ENSRNOG00000000663	Tfip11	98	31.494	Rattus_norvegicus
WBGene00007412	stip-1	99	31.336	ENSRBIG00000044444	TFIP11	98	31.771	Rhinopithecus_bieti
WBGene00007412	stip-1	99	31.336	ENSRROG00000034930	TFIP11	98	31.771	Rhinopithecus_roxellana
WBGene00007412	stip-1	99	31.106	ENSSBOG00000035111	TFIP11	98	31.579	Saimiri_boliviensis_boliviensis
WBGene00007412	stip-1	98	30.501	ENSSHAG00000014104	TFIP11	98	30.840	Sarcophilus_harrisii
WBGene00007412	stip-1	99	30.769	ENSSFOG00015013856	tfip11	97	31.039	Scleropages_formosus
WBGene00007412	stip-1	99	31.627	ENSSMAG00000011179	tfip11	98	31.959	Scophthalmus_maximus
WBGene00007412	stip-1	99	31.912	ENSSDUG00000014159	tfip11	98	31.834	Seriola_dumerili
WBGene00007412	stip-1	64	32.200	ENSSLDG00000001011	tfip11	94	32.679	Seriola_lalandi_dorsalis
WBGene00007412	stip-1	73	40.000	ENSSARG00000007065	TFIP11	91	40.800	Sorex_araneus
WBGene00007412	stip-1	99	31.903	ENSSPAG00000017719	tfip11	98	32.599	Stegastes_partitus
WBGene00007412	stip-1	99	31.465	ENSSSCG00000009962	TFIP11	98	31.693	Sus_scrofa
WBGene00007412	stip-1	99	30.920	ENSTGUG00000007710	TFIP11	99	30.857	Taeniopygia_guttata
WBGene00007412	stip-1	99	31.561	ENSTRUG00000016348	tfip11	99	32.139	Takifugu_rubripes
WBGene00007412	stip-1	99	30.983	ENSTNIG00000015914	tfip11	97	31.329	Tetraodon_nigroviridis
WBGene00007412	stip-1	74	34.576	ENSTBEG00000007895	TFIP11	72	35.762	Tupaia_belangeri
WBGene00007412	stip-1	59	39.423	ENSTTRG00000009421	TFIP11	65	35.000	Tursiops_truncatus
WBGene00007412	stip-1	87	33.289	ENSUAMG00000016248	TFIP11	90	33.467	Ursus_americanus
WBGene00007412	stip-1	99	32.060	ENSUMAG00000015595	TFIP11	98	32.292	Ursus_maritimus
WBGene00007412	stip-1	87	33.422	ENSVVUG00000015797	TFIP11	91	33.600	Vulpes_vulpes
WBGene00007412	stip-1	99	31.871	ENSXCOG00000016947	tfip11	98	31.494	Xiphophorus_couchianus
WBGene00007412	stip-1	99	31.871	ENSXMAG00000007524	tfip11	98	31.415	Xiphophorus_maculatus