EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00007429 (Gene tree)
Gene ID: -
Gene Symbol: C08B6.8
Alias: -
Full Name: Probable oligoribonuclease
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 8439 bases
Position: chrV:10134643-10143081
Accession: Q17819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
C08B6	RNase_T	PF00929.24	2.3e-34	1	1
C08B6	RNase_T	PF00929.24	2.3e-09	1	1
C08B6	RNase_T	PF00929.24	2.3e-09	1	1
C08B6	RNase_T	PF00929.24	2.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
C08B6.8a	-	838	-	C08B6.8a	193 (aa)	NP_001256185	Q17819
C08B6.8b.1	-	776	-	C08B6.8b.1	76 (aa)	NP_001256186	G3MU09
C08B6.8b.3	-	661	-	C08B6.8b.3	76 (aa)	NP_001256186	G3MU09
C08B6.8b.2	-	697	-	C08B6.8b.2	76 (aa)	NP_001256186	G3MU09

Gene Model

Click here to download WBGene00007429's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00007429's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00007429	C08B6.8	88	56.522	ENSG00000076043	REXO2	89	47.024	Homo_sapiens
WBGene00007429	C08B6.8	93	56.164	ENSAPOG00000011971	smfn	86	53.000	Acanthochromis_polyacanthus
WBGene00007429	C08B6.8	88	56.522	ENSAMEG00000013263	REXO2	77	46.448	Ailuropoda_melanoleuca
WBGene00007429	C08B6.8	93	56.164	ENSACIG00000023553	smfn	92	49.412	Amphilophus_citrinellus
WBGene00007429	C08B6.8	93	54.795	ENSAOCG00000011565	smfn	71	47.863	Amphiprion_ocellaris
WBGene00007429	C08B6.8	93	54.795	ENSAPEG00000012435	smfn	67	48.066	Amphiprion_percula
WBGene00007429	C08B6.8	93	57.534	ENSATEG00000015385	smfn	66	47.541	Anabas_testudineus
WBGene00007429	C08B6.8	93	54.795	ENSAPLG00000005045	REXO2	86	47.159	Anas_platyrhynchos
WBGene00007429	C08B6.8	95	45.946	ENSACAG00000011631	REXO2	84	42.778	Anolis_carolinensis
WBGene00007429	C08B6.8	59	34.211	ENSANAG00000027457	-	81	34.211	Aotus_nancymaae
WBGene00007429	C08B6.8	88	56.522	ENSANAG00000020834	REXO2	77	46.448	Aotus_nancymaae
WBGene00007429	C08B6.8	92	55.556	ENSACLG00000024566	smfn	89	48.521	Astatotilapia_calliptera
WBGene00007429	C08B6.8	88	56.522	ENSBTAG00000005843	REXO2	77	46.448	Bos_taurus
WBGene00007429	C08B6.8	88	55.072	ENSCJAG00000012434	REXO2	77	45.902	Callithrix_jacchus
WBGene00007429	C08B6.8	88	56.522	ENSCAFG00000013511	REXO2	77	46.448	Canis_familiaris
WBGene00007429	C08B6.8	88	56.522	ENSCAFG00020002513	REXO2	77	46.448	Canis_lupus_dingo
WBGene00007429	C08B6.8	88	56.522	ENSCHIG00000009264	REXO2	77	46.448	Capra_hircus
WBGene00007429	C08B6.8	88	56.522	ENSTSYG00000002237	REXO2	77	46.448	Carlito_syrichta
WBGene00007429	C08B6.8	88	56.522	ENSTSYG00000027948	-	89	42.857	Carlito_syrichta
WBGene00007429	C08B6.8	88	56.522	ENSCAPG00000006093	REXO2	90	47.059	Cavia_aperea
WBGene00007429	C08B6.8	88	56.522	ENSCPOG00000010548	REXO2	77	46.448	Cavia_porcellus
WBGene00007429	C08B6.8	88	56.522	ENSCCAG00000034979	REXO2	77	46.995	Cebus_capucinus
WBGene00007429	C08B6.8	88	56.522	ENSCATG00000015278	REXO2	76	46.409	Cercocebus_atys
WBGene00007429	C08B6.8	88	56.522	ENSCLAG00000011195	REXO2	78	46.448	Chinchilla_lanigera
WBGene00007429	C08B6.8	88	56.522	ENSCSAG00000002754	REXO2	76	46.409	Chlorocebus_sabaeus
WBGene00007429	C08B6.8	88	53.623	ENSCHOG00000000642	-	77	44.809	Choloepus_hoffmanni
WBGene00007429	C08B6.8	54	39.423	ENSCHOG00000013497	REXO2	74	39.423	Choloepus_hoffmanni
WBGene00007429	C08B6.8	93	54.795	ENSCPBG00000009359	REXO2	81	47.414	Chrysemys_picta_bellii
WBGene00007429	C08B6.8	89	52.941	ENSCING00000009858	-	87	46.629	Ciona_intestinalis
WBGene00007429	C08B6.8	88	56.522	ENSCANG00000034756	REXO2	76	46.409	Colobus_angolensis_palliatus
WBGene00007429	C08B6.8	88	59.420	ENSCGRG00001019814	-	77	47.541	Cricetulus_griseus_chok1gshd
WBGene00007429	C08B6.8	88	57.971	ENSCGRG00001013673	-	89	46.448	Cricetulus_griseus_chok1gshd
WBGene00007429	C08B6.8	88	56.522	ENSCGRG00001010922	-	90	46.739	Cricetulus_griseus_chok1gshd
WBGene00007429	C08B6.8	88	59.420	ENSCGRG00000006235	Rexo2	77	47.541	Cricetulus_griseus_crigri
WBGene00007429	C08B6.8	93	52.055	ENSCSEG00000007214	smfn	69	44.737	Cynoglossus_semilaevis
WBGene00007429	C08B6.8	92	55.556	ENSCVAG00000012008	smfn	91	49.704	Cyprinodon_variegatus
WBGene00007429	C08B6.8	88	55.072	ENSDARG00000009806	smfn	68	48.571	Danio_rerio
WBGene00007429	C08B6.8	79	56.452	ENSDNOG00000046533	REXO2	82	46.512	Dasypus_novemcinctus
WBGene00007429	C08B6.8	88	56.522	ENSDORG00000011255	Rexo2	77	46.448	Dipodomys_ordii
WBGene00007429	C08B6.8	88	50.725	ENSDORG00000025142	-	76	35.028	Dipodomys_ordii
WBGene00007429	C08B6.8	88	55.072	FBgn0039115	CG10214	85	44.199	Drosophila_melanogaster
WBGene00007429	C08B6.8	88	53.623	ENSEBUG00000013964	REXO2	61	46.629	Eptatretus_burgeri
WBGene00007429	C08B6.8	88	56.522	ENSEASG00005006674	REXO2	77	46.448	Equus_asinus_asinus
WBGene00007429	C08B6.8	88	56.522	ENSECAG00000005988	REXO2	77	46.448	Equus_caballus
WBGene00007429	C08B6.8	88	55.072	ENSELUG00000020072	smfn	63	46.703	Esox_lucius
WBGene00007429	C08B6.8	88	56.522	ENSFCAG00000018632	REXO2	77	46.448	Felis_catus
WBGene00007429	C08B6.8	93	53.425	ENSFALG00000010044	REXO2	85	46.784	Ficedula_albicollis
WBGene00007429	C08B6.8	88	56.522	ENSFDAG00000011764	REXO2	77	46.448	Fukomys_damarensis
WBGene00007429	C08B6.8	88	53.623	ENSGMOG00000006370	smfn	94	48.352	Gadus_morhua
WBGene00007429	C08B6.8	93	54.795	ENSGALG00000035980	REXO2	77	49.162	Gallus_gallus
WBGene00007429	C08B6.8	88	55.072	ENSGAFG00000015349	smfn	63	49.153	Gambusia_affinis
WBGene00007429	C08B6.8	92	52.778	ENSGACG00000020096	smfn	88	46.067	Gasterosteus_aculeatus
WBGene00007429	C08B6.8	93	53.425	ENSGAGG00000021126	REXO2	79	46.961	Gopherus_agassizii
WBGene00007429	C08B6.8	88	56.522	ENSGGOG00000023267	REXO2	76	46.409	Gorilla_gorilla
WBGene00007429	C08B6.8	92	55.556	ENSHBUG00000020097	REXO2	57	48.696	Haplochromis_burtoni
WBGene00007429	C08B6.8	88	56.522	ENSHGLG00000013556	REXO2	77	46.448	Heterocephalus_glaber_female
WBGene00007429	C08B6.8	88	56.522	ENSHGLG00100005257	REXO2	77	46.448	Heterocephalus_glaber_male
WBGene00007429	C08B6.8	88	55.072	ENSHCOG00000007122	smfn	93	46.988	Hippocampus_comes
WBGene00007429	C08B6.8	88	57.971	ENSIPUG00000020440	rexo2	69	48.387	Ictalurus_punctatus
WBGene00007429	C08B6.8	88	56.522	ENSSTOG00000012465	REXO2	77	46.448	Ictidomys_tridecemlineatus
WBGene00007429	C08B6.8	88	56.522	ENSJJAG00000013710	-	77	46.448	Jaculus_jaculus
WBGene00007429	C08B6.8	89	55.714	ENSJJAG00000022605	-	71	37.363	Jaculus_jaculus
WBGene00007429	C08B6.8	92	55.556	ENSKMAG00000016795	smfn	65	48.352	Kryptolebias_marmoratus
WBGene00007429	C08B6.8	93	58.904	ENSLBEG00000006021	smfn	90	50.588	Labrus_bergylta
WBGene00007429	C08B6.8	92	56.944	ENSLACG00000018623	REXO2	77	43.011	Latimeria_chalumnae
WBGene00007429	C08B6.8	93	53.425	ENSLOCG00000002389	smfn	90	46.316	Lepisosteus_oculatus
WBGene00007429	C08B6.8	88	56.522	ENSLAFG00000012451	REXO2	77	46.448	Loxodonta_africana
WBGene00007429	C08B6.8	88	56.522	ENSMFAG00000041155	REXO2	76	46.409	Macaca_fascicularis
WBGene00007429	C08B6.8	88	56.522	ENSMMUG00000012269	REXO2	76	46.409	Macaca_mulatta
WBGene00007429	C08B6.8	88	56.522	ENSMNEG00000033379	REXO2	76	46.409	Macaca_nemestrina
WBGene00007429	C08B6.8	88	56.522	ENSMLEG00000036571	REXO2	76	46.409	Mandrillus_leucophaeus
WBGene00007429	C08B6.8	93	54.795	ENSMAMG00000021209	smfn	66	46.961	Mastacembelus_armatus
WBGene00007429	C08B6.8	92	55.556	ENSMZEG00005023224	-	71	47.826	Maylandia_zebra
WBGene00007429	C08B6.8	92	55.556	ENSMZEG00005020730	REXO2	71	47.826	Maylandia_zebra
WBGene00007429	C08B6.8	88	54.930	ENSMGAG00000003026	REXO2	87	46.479	Meleagris_gallopavo
WBGene00007429	C08B6.8	88	59.420	ENSMAUG00000014576	Rexo2	77	47.541	Mesocricetus_auratus
WBGene00007429	C08B6.8	88	56.522	ENSMICG00000010094	REXO2	77	46.448	Microcebus_murinus
WBGene00007429	C08B6.8	93	57.534	ENSMOCG00000009016	Rexo2	77	46.995	Microtus_ochrogaster
WBGene00007429	C08B6.8	88	53.623	ENSMMOG00000006430	smfn	66	47.458	Mola_mola
WBGene00007429	C08B6.8	93	54.795	ENSMODG00000013913	REXO2	78	46.448	Monodelphis_domestica
WBGene00007429	C08B6.8	93	53.425	ENSMALG00000018130	smfn	52	47.514	Monopterus_albus
WBGene00007429	C08B6.8	88	57.971	MGP_CAROLIEiJ_G0032166	Rexo2	80	45.789	Mus_caroli
WBGene00007429	C08B6.8	88	57.971	ENSMUSG00000032026	Rexo2	80	45.789	Mus_musculus
WBGene00007429	C08B6.8	88	57.971	MGP_PahariEiJ_G0015034	Rexo2	80	45.789	Mus_pahari
WBGene00007429	C08B6.8	88	57.971	MGP_SPRETEiJ_G0033305	Rexo2	80	45.789	Mus_spretus
WBGene00007429	C08B6.8	88	56.522	ENSMPUG00000003947	REXO2	77	46.448	Mustela_putorius_furo
WBGene00007429	C08B6.8	88	56.522	ENSMLUG00000009030	REXO2	77	46.448	Myotis_lucifugus
WBGene00007429	C08B6.8	88	55.072	ENSNGAG00000008819	Rexo2	89	45.902	Nannospalax_galili
WBGene00007429	C08B6.8	92	55.556	ENSNBRG00000006529	smfn	90	48.521	Neolamprologus_brichardi
WBGene00007429	C08B6.8	88	56.522	ENSNLEG00000029745	REXO2	76	46.409	Nomascus_leucogenys
WBGene00007429	C08B6.8	93	54.795	ENSMEUG00000011558	REXO2	84	46.448	Notamacropus_eugenii
WBGene00007429	C08B6.8	88	56.522	ENSODEG00000009750	-	90	47.059	Octodon_degus
WBGene00007429	C08B6.8	82	50.000	ENSODEG00000016046	-	87	40.000	Octodon_degus
WBGene00007429	C08B6.8	92	55.556	ENSONIG00000001954	smfn	80	47.283	Oreochromis_niloticus
WBGene00007429	C08B6.8	88	59.420	ENSOANG00000001754	REXO2	77	47.541	Ornithorhynchus_anatinus
WBGene00007429	C08B6.8	88	56.522	ENSOCUG00000004274	REXO2	73	46.995	Oryctolagus_cuniculus
WBGene00007429	C08B6.8	93	58.904	ENSORLG00000005119	smfn	60	47.568	Oryzias_latipes
WBGene00007429	C08B6.8	93	58.904	ENSORLG00020010121	smfn	60	47.568	Oryzias_latipes_hni
WBGene00007429	C08B6.8	93	58.904	ENSORLG00015015699	smfn	60	47.568	Oryzias_latipes_hsok
WBGene00007429	C08B6.8	93	57.534	ENSOMEG00000008940	-	89	48.819	Oryzias_melastigma
WBGene00007429	C08B6.8	93	57.534	ENSOMEG00000016878	REXO2	68	48.649	Oryzias_melastigma
WBGene00007429	C08B6.8	88	56.522	ENSOGAG00000016860	REXO2	77	46.448	Otolemur_garnettii
WBGene00007429	C08B6.8	88	56.522	ENSOARG00000001040	REXO2	86	46.448	Ovis_aries
WBGene00007429	C08B6.8	88	56.522	ENSPPAG00000039849	REXO2	76	46.409	Pan_paniscus
WBGene00007429	C08B6.8	88	56.522	ENSPPRG00000007255	REXO2	77	46.448	Panthera_pardus
WBGene00007429	C08B6.8	88	56.522	ENSPTIG00000015578	REXO2	90	47.059	Panthera_tigris_altaica
WBGene00007429	C08B6.8	88	56.522	ENSPTRG00000004306	REXO2	76	46.409	Pan_troglodytes
WBGene00007429	C08B6.8	88	56.522	ENSPANG00000010675	REXO2	76	46.409	Papio_anubis
WBGene00007429	C08B6.8	93	52.055	ENSPKIG00000000911	smfn	92	40.678	Paramormyrops_kingsleyae
WBGene00007429	C08B6.8	93	54.795	ENSPSIG00000005151	REXO2	67	46.486	Pelodiscus_sinensis
WBGene00007429	C08B6.8	95	52.703	ENSPMGG00000007442	smfn	90	47.953	Periophthalmus_magnuspinnatus
WBGene00007429	C08B6.8	88	48.571	ENSPEMG00000001421	Rexo2	76	36.022	Peromyscus_maniculatus_bairdii
WBGene00007429	C08B6.8	92	55.556	ENSPMAG00000001022	REXO2	100	49.138	Petromyzon_marinus
WBGene00007429	C08B6.8	88	53.623	ENSPFOG00000017861	smfn	87	49.153	Poecilia_formosa
WBGene00007429	C08B6.8	80	47.134	ENSPLAG00000007327	REXO2	61	47.134	Poecilia_latipinna
WBGene00007429	C08B6.8	88	55.072	ENSPMEG00000017343	smfn	63	49.718	Poecilia_mexicana
WBGene00007429	C08B6.8	88	55.072	ENSPREG00000016438	smfn	63	49.153	Poecilia_reticulata
WBGene00007429	C08B6.8	88	56.522	ENSPPYG00000003895	REXO2	76	46.409	Pongo_abelii
WBGene00007429	C08B6.8	88	56.522	ENSPCAG00000005237	REXO2	77	45.902	Procavia_capensis
WBGene00007429	C08B6.8	81	44.654	ENSPCOG00000027639	REXO2	82	44.654	Propithecus_coquereli
WBGene00007429	C08B6.8	88	56.522	ENSPVAG00000005295	REXO2	77	39.459	Pteropus_vampyrus
WBGene00007429	C08B6.8	92	55.556	ENSPNYG00000018401	smfn	71	47.283	Pundamilia_nyererei
WBGene00007429	C08B6.8	88	53.623	ENSPNAG00000005290	smfn	69	46.524	Pygocentrus_nattereri
WBGene00007429	C08B6.8	88	57.971	ENSRNOG00000018939	Rexo2	80	45.789	Rattus_norvegicus
WBGene00007429	C08B6.8	88	56.522	ENSRBIG00000037809	REXO2	76	46.409	Rhinopithecus_bieti
WBGene00007429	C08B6.8	88	56.522	ENSRROG00000038928	REXO2	76	46.409	Rhinopithecus_roxellana
WBGene00007429	C08B6.8	87	41.176	YLR059C	REX2	67	36.813	Saccharomyces_cerevisiae
WBGene00007429	C08B6.8	88	56.522	ENSSBOG00000028651	REXO2	77	46.448	Saimiri_boliviensis_boliviensis
WBGene00007429	C08B6.8	93	54.795	ENSSHAG00000008008	REXO2	81	45.263	Sarcophilus_harrisii
WBGene00007429	C08B6.8	88	53.623	ENSSFOG00015022414	smfn	88	45.783	Scleropages_formosus
WBGene00007429	C08B6.8	88	52.174	ENSSMAG00000003168	smfn	64	46.328	Scophthalmus_maximus
WBGene00007429	C08B6.8	93	52.055	ENSSDUG00000015624	smfn	64	47.514	Seriola_dumerili
WBGene00007429	C08B6.8	93	50.685	ENSSLDG00000014005	smfn	64	45.856	Seriola_lalandi_dorsalis
WBGene00007429	C08B6.8	65	44.444	ENSSARG00000014530	REXO2	99	44.444	Sorex_araneus
WBGene00007429	C08B6.8	93	47.945	ENSSPUG00000006005	REXO2	76	42.958	Sphenodon_punctatus
WBGene00007429	C08B6.8	93	52.055	ENSSPAG00000001530	smfn	91	47.059	Stegastes_partitus
WBGene00007429	C08B6.8	88	56.522	ENSSSCG00000015056	REXO2	77	46.448	Sus_scrofa
WBGene00007429	C08B6.8	93	53.425	ENSTGUG00000000121	REXO2	76	47.486	Taeniopygia_guttata
WBGene00007429	C08B6.8	96	54.667	ENSTRUG00000021529	smfn	68	47.541	Takifugu_rubripes
WBGene00007429	C08B6.8	99	51.948	ENSTNIG00000008588	smfn	78	48.588	Tetraodon_nigroviridis
WBGene00007429	C08B6.8	88	56.522	ENSTBEG00000017040	REXO2	77	46.448	Tupaia_belangeri
WBGene00007429	C08B6.8	88	56.522	ENSTTRG00000014928	REXO2	77	46.448	Tursiops_truncatus
WBGene00007429	C08B6.8	92	42.373	ENSUAMG00000019096	REXO2	82	44.654	Ursus_americanus
WBGene00007429	C08B6.8	88	56.522	ENSUMAG00000003770	REXO2	77	46.448	Ursus_maritimus
WBGene00007429	C08B6.8	85	34.940	ENSVPAG00000006301	REXO2	91	35.294	Vicugna_pacos
WBGene00007429	C08B6.8	88	56.522	ENSVVUG00000025223	REXO2	78	46.448	Vulpes_vulpes
WBGene00007429	C08B6.8	93	56.164	ENSXETG00000012648	rexo2	78	45.263	Xenopus_tropicalis
WBGene00007429	C08B6.8	88	55.072	ENSXCOG00000018838	smfn	85	50.000	Xiphophorus_couchianus
WBGene00007429	C08B6.8	88	56.522	ENSXMAG00000021125	smfn	58	49.724	Xiphophorus_maculatus