EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00007444 (Gene tree)
Gene ID: -
Gene Symbol: C08F8.2
Alias: -
Full Name: ATP-dependent RNA helicase SUV3 homolog%2C mitochondrial
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 5146 bases
Position: chrIV:11149189-11154334
Accession: Q17828
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
C08F8	SUV3_C	PF12513.8	2.7e-13	1	1
C08F8	SUV3_C	PF12513.8	2.7e-13	1	1
C08F8	SUV3_C	PF12513.8	3.5e-13	1	1
C08F8	SUV3_C	PF12513.8	3.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
C08F8.2b	-	2392	NM_001047447	C08F8.2b	719 (aa)	NP_001040912	UPI0000527F32
C08F8.2a	-	2455	NM_001047446	C08F8.2a	721 (aa)	NP_001040911	Q17828
C08F8.2c.2	-	1575	NM_001268613	C08F8.2c.2	438 (aa)	NP_001255542	E9P872
C08F8.2c.1	-	1655	NM_001268613	C08F8.2c.1	438 (aa)	NP_001255542	E9P872

Gene Model

Click here to download WBGene00007444's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00007444's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00007444	C08F8.2	99	45.119	ENSG00000156502	SUPV3L1	62	65.432	Homo_sapiens
WBGene00007444	C08F8.2	100	44.681	ENSAPOG00000012040	supv3l1	86	46.618	Acanthochromis_polyacanthus
WBGene00007444	C08F8.2	99	44.783	ENSAMEG00000017957	SUPV3L1	75	50.168	Ailuropoda_melanoleuca
WBGene00007444	C08F8.2	100	45.833	ENSACIG00000006824	supv3l1	96	48.867	Amphilophus_citrinellus
WBGene00007444	C08F8.2	100	44.255	ENSAOCG00000022898	supv3l1	86	45.985	Amphiprion_ocellaris
WBGene00007444	C08F8.2	100	44.468	ENSAPEG00000006805	supv3l1	86	46.131	Amphiprion_percula
WBGene00007444	C08F8.2	100	45.638	ENSATEG00000021682	supv3l1	85	47.104	Anabas_testudineus
WBGene00007444	C08F8.2	89	50.630	ENSAPLG00000012258	SUPV3L1	81	52.568	Anas_platyrhynchos
WBGene00007444	C08F8.2	97	45.833	ENSACAG00000009685	SUPV3L1	73	50.600	Anolis_carolinensis
WBGene00007444	C08F8.2	87	49.227	ENSANAG00000022155	SUPV3L1	78	49.273	Aotus_nancymaae
WBGene00007444	C08F8.2	100	45.336	ENSACLG00000008303	supv3l1	88	46.599	Astatotilapia_calliptera
WBGene00007444	C08F8.2	99	46.841	ENSAMXG00000009658	supv3l1	93	46.960	Astyanax_mexicanus
WBGene00007444	C08F8.2	99	45.000	ENSCJAG00000012937	SUPV3L1	76	49.917	Callithrix_jacchus
WBGene00007444	C08F8.2	99	44.902	ENSCAFG00000013839	SUPV3L1	71	50.000	Canis_familiaris
WBGene00007444	C08F8.2	99	44.902	ENSCAFG00020025942	SUPV3L1	84	51.825	Canis_lupus_dingo
WBGene00007444	C08F8.2	99	44.565	ENSCHIG00000000074	SUPV3L1	82	47.752	Capra_hircus
WBGene00007444	C08F8.2	99	44.902	ENSTSYG00000012845	SUPV3L1	82	47.907	Carlito_syrichta
WBGene00007444	C08F8.2	91	46.777	ENSCPOG00000010044	SUPV3L1	81	47.738	Cavia_porcellus
WBGene00007444	C08F8.2	96	43.527	ENSCCAG00000033975	SUPV3L1	78	46.204	Cebus_capucinus
WBGene00007444	C08F8.2	99	44.902	ENSCATG00000030043	SUPV3L1	72	49.113	Cercocebus_atys
WBGene00007444	C08F8.2	88	48.287	ENSCLAG00000010181	SUPV3L1	81	48.362	Chinchilla_lanigera
WBGene00007444	C08F8.2	99	46.087	ENSCSAG00000007811	SUPV3L1	76	50.836	Chlorocebus_sabaeus
WBGene00007444	C08F8.2	91	45.803	ENSCHOG00000008008	SUPV3L1	89	46.273	Choloepus_hoffmanni
WBGene00007444	C08F8.2	99	43.319	ENSCPBG00000000660	SUPV3L1	81	51.009	Chrysemys_picta_bellii
WBGene00007444	C08F8.2	84	39.529	ENSCING00000008091	-	89	39.863	Ciona_intestinalis
WBGene00007444	C08F8.2	99	45.336	ENSCANG00000036962	SUPV3L1	76	50.669	Colobus_angolensis_palliatus
WBGene00007444	C08F8.2	99	44.946	ENSCGRG00001020865	Supv3l1	76	50.505	Cricetulus_griseus_chok1gshd
WBGene00007444	C08F8.2	99	44.946	ENSCGRG00000014899	Supv3l1	76	50.505	Cricetulus_griseus_crigri
WBGene00007444	C08F8.2	99	44.105	ENSCSEG00000014061	supv3l1	84	45.745	Cynoglossus_semilaevis
WBGene00007444	C08F8.2	100	44.130	ENSCVAG00000009948	supv3l1	86	45.765	Cyprinodon_variegatus
WBGene00007444	C08F8.2	99	45.778	ENSDARG00000077728	supv3l1	89	47.353	Danio_rerio
WBGene00007444	C08F8.2	90	46.477	ENSDNOG00000004855	SUPV3L1	82	47.582	Dasypus_novemcinctus
WBGene00007444	C08F8.2	99	46.827	ENSDORG00000016650	Supv3l1	86	48.567	Dipodomys_ordii
WBGene00007444	C08F8.2	99	44.843	FBgn0037232	Suv3	89	46.041	Drosophila_melanogaster
WBGene00007444	C08F8.2	88	47.837	ENSEBUG00000010807	supv3l1	71	48.093	Eptatretus_burgeri
WBGene00007444	C08F8.2	99	44.685	ENSEASG00005015607	SUPV3L1	82	48.217	Equus_asinus_asinus
WBGene00007444	C08F8.2	99	44.685	ENSECAG00000016297	SUPV3L1	82	48.217	Equus_caballus
WBGene00007444	C08F8.2	99	30.131	ENSEEUG00000007717	SUPV3L1	76	38.693	Erinaceus_europaeus
WBGene00007444	C08F8.2	92	47.093	ENSELUG00000018676	supv3l1	79	49.838	Esox_lucius
WBGene00007444	C08F8.2	99	44.902	ENSFCAG00000004921	SUPV3L1	75	50.168	Felis_catus
WBGene00007444	C08F8.2	92	48.668	ENSFALG00000013094	SUPV3L1	80	53.591	Ficedula_albicollis
WBGene00007444	C08F8.2	99	45.197	ENSFDAG00000011147	SUPV3L1	82	48.674	Fukomys_damarensis
WBGene00007444	C08F8.2	100	45.000	ENSFHEG00000011288	supv3l1	86	46.222	Fundulus_heteroclitus
WBGene00007444	C08F8.2	85	50.392	ENSGMOG00000012387	supv3l1	93	48.571	Gadus_morhua
WBGene00007444	C08F8.2	89	49.127	ENSGALG00000004197	SUPV3L1	77	50.656	Gallus_gallus
WBGene00007444	C08F8.2	85	48.303	ENSGAFG00000003909	supv3l1	82	48.829	Gambusia_affinis
WBGene00007444	C08F8.2	100	46.272	ENSGACG00000016077	supv3l1	89	47.085	Gasterosteus_aculeatus
WBGene00007444	C08F8.2	98	45.434	ENSGAGG00000015564	SUPV3L1	81	50.697	Gopherus_agassizii
WBGene00007444	C08F8.2	99	45.119	ENSGGOG00000005325	SUPV3L1	76	50.334	Gorilla_gorilla
WBGene00007444	C08F8.2	100	45.336	ENSHBUG00000017736	supv3l1	88	46.599	Haplochromis_burtoni
WBGene00007444	C08F8.2	99	44.783	ENSHGLG00000014418	SUPV3L1	76	49.833	Heterocephalus_glaber_female
WBGene00007444	C08F8.2	99	45.077	ENSHGLG00100005752	SUPV3L1	76	49.833	Heterocephalus_glaber_male
WBGene00007444	C08F8.2	100	46.507	ENSHCOG00000013962	supv3l1	86	47.697	Hippocampus_comes
WBGene00007444	C08F8.2	99	45.435	ENSIPUG00000015765	supv3l1	90	46.957	Ictalurus_punctatus
WBGene00007444	C08F8.2	99	45.336	ENSSTOG00000000503	SUPV3L1	82	48.292	Ictidomys_tridecemlineatus
WBGene00007444	C08F8.2	99	44.565	ENSJJAG00000012919	Supv3l1	74	50.433	Jaculus_jaculus
WBGene00007444	C08F8.2	100	45.217	ENSKMAG00000020644	supv3l1	87	46.519	Kryptolebias_marmoratus
WBGene00007444	C08F8.2	100	44.468	ENSLBEG00000009091	supv3l1	76	50.166	Labrus_bergylta
WBGene00007444	C08F8.2	94	44.712	ENSLACG00000008028	SUPV3L1	96	44.717	Latimeria_chalumnae
WBGene00007444	C08F8.2	99	43.133	ENSLOCG00000009159	supv3l1	87	46.945	Lepisosteus_oculatus
WBGene00007444	C08F8.2	95	46.286	ENSLAFG00000000889	SUPV3L1	81	48.513	Loxodonta_africana
WBGene00007444	C08F8.2	99	45.553	ENSMFAG00000003566	SUPV3L1	84	52.459	Macaca_fascicularis
WBGene00007444	C08F8.2	99	45.553	ENSMNEG00000016010	SUPV3L1	76	50.836	Macaca_nemestrina
WBGene00007444	C08F8.2	99	45.336	ENSMLEG00000028551	SUPV3L1	75	50.673	Mandrillus_leucophaeus
WBGene00007444	C08F8.2	100	45.572	ENSMAMG00000020254	supv3l1	88	47.186	Mastacembelus_armatus
WBGene00007444	C08F8.2	100	45.336	ENSMZEG00005011568	supv3l1	88	46.744	Maylandia_zebra
WBGene00007444	C08F8.2	89	48.411	ENSMGAG00000004251	SUPV3L1	84	50.492	Meleagris_gallopavo
WBGene00007444	C08F8.2	99	44.783	ENSMAUG00000005895	Supv3l1	76	50.505	Mesocricetus_auratus
WBGene00007444	C08F8.2	99	45.969	ENSMICG00000014955	SUPV3L1	93	47.041	Microcebus_murinus
WBGene00007444	C08F8.2	92	48.441	ENSMOCG00000013772	Supv3l1	85	46.936	Microtus_ochrogaster
WBGene00007444	C08F8.2	92	47.393	ENSMMOG00000015898	supv3l1	94	47.634	Mola_mola
WBGene00007444	C08F8.2	99	44.348	ENSMODG00000010700	SUPV3L1	82	49.194	Monodelphis_domestica
WBGene00007444	C08F8.2	99	40.952	ENSMALG00000005447	supv3l1	89	42.052	Monopterus_albus
WBGene00007444	C08F8.2	99	44.783	MGP_CAROLIEiJ_G0015383	Supv3l1	79	49.838	Mus_caroli
WBGene00007444	C08F8.2	99	44.902	ENSMUSG00000020079	Supv3l1	79	49.351	Mus_musculus
WBGene00007444	C08F8.2	99	39.479	MGP_PahariEiJ_G0030799	Supv3l1	82	43.807	Mus_pahari
WBGene00007444	C08F8.2	99	44.565	MGP_SPRETEiJ_G0016195	Supv3l1	92	44.972	Mus_spretus
WBGene00007444	C08F8.2	99	45.161	ENSMPUG00000004499	SUPV3L1	75	50.000	Mustela_putorius_furo
WBGene00007444	C08F8.2	95	39.381	ENSMLUG00000024349	-	78	42.819	Myotis_lucifugus
WBGene00007444	C08F8.2	99	45.591	ENSMLUG00000012664	-	82	48.837	Myotis_lucifugus
WBGene00007444	C08F8.2	99	44.252	ENSNGAG00000001563	Supv3l1	76	50.000	Nannospalax_galili
WBGene00007444	C08F8.2	99	45.119	ENSNLEG00000011521	SUPV3L1	77	50.167	Nomascus_leucogenys
WBGene00007444	C08F8.2	99	45.815	ENSMEUG00000009010	SUPV3L1	90	47.007	Notamacropus_eugenii
WBGene00007444	C08F8.2	99	42.391	ENSOPRG00000001705	SUPV3L1	84	42.793	Ochotona_princeps
WBGene00007444	C08F8.2	99	44.541	ENSODEG00000014392	SUPV3L1	82	47.894	Octodon_degus
WBGene00007444	C08F8.2	99	42.576	ENSOANG00000008886	SUPV3L1	94	45.441	Ornithorhynchus_anatinus
WBGene00007444	C08F8.2	92	48.441	ENSOCUG00000004933	SUPV3L1	75	51.010	Oryctolagus_cuniculus
WBGene00007444	C08F8.2	100	45.022	ENSORLG00000010240	supv3l1	92	47.281	Oryzias_latipes
WBGene00007444	C08F8.2	100	45.022	ENSORLG00020004189	supv3l1	86	46.677	Oryzias_latipes_hni
WBGene00007444	C08F8.2	100	45.238	ENSORLG00015002310	supv3l1	86	46.824	Oryzias_latipes_hsok
WBGene00007444	C08F8.2	100	45.295	ENSOMEG00000004719	supv3l1	86	46.429	Oryzias_melastigma
WBGene00007444	C08F8.2	99	44.783	ENSOGAG00000005905	SUPV3L1	76	49.833	Otolemur_garnettii
WBGene00007444	C08F8.2	99	44.783	ENSOARG00000005389	SUPV3L1	84	51.825	Ovis_aries
WBGene00007444	C08F8.2	99	45.119	ENSPPAG00000034596	SUPV3L1	76	50.334	Pan_paniscus
WBGene00007444	C08F8.2	99	44.902	ENSPPRG00000004832	SUPV3L1	75	50.168	Panthera_pardus
WBGene00007444	C08F8.2	99	45.000	ENSPTIG00000004317	SUPV3L1	75	50.000	Panthera_tigris_altaica
WBGene00007444	C08F8.2	99	45.119	ENSPTRG00000002568	SUPV3L1	76	50.334	Pan_troglodytes
WBGene00007444	C08F8.2	99	43.601	ENSPANG00000022168	SUPV3L1	72	50.709	Papio_anubis
WBGene00007444	C08F8.2	100	44.396	ENSPKIG00000014484	supv3l1	85	47.289	Paramormyrops_kingsleyae
WBGene00007444	C08F8.2	98	44.977	ENSPSIG00000017997	SUPV3L1	81	49.652	Pelodiscus_sinensis
WBGene00007444	C08F8.2	99	41.928	ENSPMGG00000001235	supv3l1	95	43.704	Periophthalmus_magnuspinnatus
WBGene00007444	C08F8.2	92	47.722	ENSPEMG00000016292	-	85	47.313	Peromyscus_maniculatus_bairdii
WBGene00007444	C08F8.2	99	44.956	ENSPCIG00000015440	SUPV3L1	79	48.871	Phascolarctos_cinereus
WBGene00007444	C08F8.2	85	48.303	ENSPFOG00000015968	supv3l1	86	45.291	Poecilia_formosa
WBGene00007444	C08F8.2	85	48.303	ENSPLAG00000012582	supv3l1	86	45.291	Poecilia_latipinna
WBGene00007444	C08F8.2	85	48.303	ENSPMEG00000015003	supv3l1	86	45.291	Poecilia_mexicana
WBGene00007444	C08F8.2	99	43.791	ENSPREG00000014702	supv3l1	88	45.277	Poecilia_reticulata
WBGene00007444	C08F8.2	99	45.336	ENSPPYG00000002385	SUPV3L1	76	50.502	Pongo_abelii
WBGene00007444	C08F8.2	76	42.439	ENSPCOG00000021435	SUPV3L1	85	39.186	Propithecus_coquereli
WBGene00007444	C08F8.2	83	58.294	ENSPVAG00000009536	SUPV3L1	73	51.606	Pteropus_vampyrus
WBGene00007444	C08F8.2	100	45.119	ENSPNYG00000015894	supv3l1	88	46.454	Pundamilia_nyererei
WBGene00007444	C08F8.2	99	45.000	ENSPNAG00000018698	supv3l1	88	47.478	Pygocentrus_nattereri
WBGene00007444	C08F8.2	99	45.455	ENSRNOG00000000392	Supv3l1	94	47.583	Rattus_norvegicus
WBGene00007444	C08F8.2	99	45.870	ENSRROG00000000787	SUPV3L1	76	50.836	Rhinopithecus_roxellana
WBGene00007444	C08F8.2	84	31.458	YPL029W	SUV3	70	34.091	Saccharomyces_cerevisiae
WBGene00007444	C08F8.2	99	44.685	ENSSBOG00000033775	SUPV3L1	78	49.273	Saimiri_boliviensis_boliviensis
WBGene00007444	C08F8.2	99	45.336	ENSSHAG00000000910	SUPV3L1	77	46.243	Sarcophilus_harrisii
WBGene00007444	C08F8.2	99	44.956	ENSSFOG00015014751	supv3l1	94	48.012	Scleropages_formosus
WBGene00007444	C08F8.2	99	44.105	ENSSMAG00000004035	supv3l1	75	50.257	Scophthalmus_maximus
WBGene00007444	C08F8.2	99	45.259	ENSSDUG00000021594	supv3l1	84	47.360	Seriola_dumerili
WBGene00007444	C08F8.2	99	45.259	ENSSLDG00000025671	supv3l1	84	47.360	Seriola_lalandi_dorsalis
WBGene00007444	C08F8.2	88	49.114	ENSSPUG00000004216	SUPV3L1	74	50.943	Sphenodon_punctatus
WBGene00007444	C08F8.2	100	45.495	ENSSPAG00000012762	supv3l1	88	45.668	Stegastes_partitus
WBGene00007444	C08F8.2	99	45.119	ENSSSCG00000010251	SUPV3L1	84	52.190	Sus_scrofa
WBGene00007444	C08F8.2	85	51.436	ENSTGUG00000003907	SUPV3L1	98	52.108	Taeniopygia_guttata
WBGene00007444	C08F8.2	99	45.415	ENSTRUG00000001882	supv3l1	86	46.177	Takifugu_rubripes
WBGene00007444	C08F8.2	99	44.565	ENSTNIG00000013794	supv3l1	85	46.487	Tetraodon_nigroviridis
WBGene00007444	C08F8.2	99	42.950	ENSTBEG00000015538	SUPV3L1	73	49.385	Tupaia_belangeri
WBGene00007444	C08F8.2	99	44.252	ENSUAMG00000018007	SUPV3L1	83	50.170	Ursus_americanus
WBGene00007444	C08F8.2	99	44.469	ENSUMAG00000007773	SUPV3L1	83	51.642	Ursus_maritimus
WBGene00007444	C08F8.2	99	44.902	ENSVVUG00000020506	SUPV3L1	70	50.000	Vulpes_vulpes
WBGene00007444	C08F8.2	99	41.901	ENSXETG00000008852	supv3l1	93	44.838	Xenopus_tropicalis
WBGene00007444	C08F8.2	85	48.564	ENSXCOG00000012026	supv3l1	85	45.770	Xiphophorus_couchianus
WBGene00007444	C08F8.2	85	48.564	ENSXMAG00000014547	supv3l1	88	45.770	Xiphophorus_maculatus