EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00007463 (Gene tree)
Gene ID: -
Gene Symbol: vgln-1
Alias: -
Full Name: ViGiLN homolog
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 4525 bases
Position: chrII:9886557-9891081
Accession: B3GWB2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
C08H9	KH_1	PF00013.29	7e-166	1	14
C08H9	KH_1	PF00013.29	7e-166	2	14
C08H9	KH_1	PF00013.29	7e-166	3	14
C08H9	KH_1	PF00013.29	7e-166	4	14
C08H9	KH_1	PF00013.29	7e-166	5	14
C08H9	KH_1	PF00013.29	7e-166	6	14
C08H9	KH_1	PF00013.29	7e-166	7	14
C08H9	KH_1	PF00013.29	7e-166	8	14
C08H9	KH_1	PF00013.29	7e-166	9	14
C08H9	KH_1	PF00013.29	7e-166	10	14
C08H9	KH_1	PF00013.29	7e-166	11	14
C08H9	KH_1	PF00013.29	7e-166	12	14
C08H9	KH_1	PF00013.29	7e-166	13	14
C08H9	KH_1	PF00013.29	7e-166	14	14
C08H9	KH_1	PF00013.29	3.6e-121	1	10
C08H9	KH_1	PF00013.29	3.6e-121	2	10
C08H9	KH_1	PF00013.29	3.6e-121	3	10
C08H9	KH_1	PF00013.29	3.6e-121	4	10
C08H9	KH_1	PF00013.29	3.6e-121	5	10
C08H9	KH_1	PF00013.29	3.6e-121	6	10
C08H9	KH_1	PF00013.29	3.6e-121	7	10
C08H9	KH_1	PF00013.29	3.6e-121	8	10
C08H9	KH_1	PF00013.29	3.6e-121	9	10
C08H9	KH_1	PF00013.29	3.6e-121	10	10

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
C08H9.2b	-	3403	NM_001136335	C08H9.2b	925 (aa)	NP_001129807	B3GWB2
C08H9.2a	-	4288	NM_063735	C08H9.2a	1220 (aa)	NP_496136	Q17832

Gene Model

Click here to download WBGene00007463's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00007463's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00007463	vgln-1	98	38.794	ENSCING00000004580	-	97	38.806	Ciona_intestinalis
WBGene00007463	vgln-1	97	37.276	ENSCSAVG00000009989	-	98	40.120	Ciona_savignyi
WBGene00007463	vgln-1	98	35.543	FBgn0027835	Dp1	90	36.864	Drosophila_melanogaster