EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00007534 (Gene tree)
Gene ID: -
Gene Symbol: C12D8.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 2743 bases
Position: chrV:10236160-10238902
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
C12D8	KH_1	PF00013.29	1.7e-64	1	4
C12D8	KH_1	PF00013.29	1.7e-64	2	4
C12D8	KH_1	PF00013.29	1.7e-64	3	4
C12D8	KH_1	PF00013.29	1.7e-64	4	4
C12D8	KH_1	PF00013.29	1.7e-64	1	4
C12D8	KH_1	PF00013.29	1.7e-64	2	4
C12D8	KH_1	PF00013.29	1.7e-64	3	4
C12D8	KH_1	PF00013.29	1.7e-64	4	4
C12D8	KH_1	PF00013.29	1.7e-64	1	4
C12D8	KH_1	PF00013.29	1.7e-64	2	4
C12D8	KH_1	PF00013.29	1.7e-64	3	4
C12D8	KH_1	PF00013.29	1.7e-64	4	4
C12D8	KH_1	PF00013.29	1.7e-64	1	4
C12D8	KH_1	PF00013.29	1.7e-64	2	4
C12D8	KH_1	PF00013.29	1.7e-64	3	4
C12D8	KH_1	PF00013.29	1.7e-64	4	4
C12D8	KH_1	PF00013.29	2.5e-64	1	4
C12D8	KH_1	PF00013.29	2.5e-64	2	4
C12D8	KH_1	PF00013.29	2.5e-64	3	4
C12D8	KH_1	PF00013.29	2.5e-64	4	4
C12D8	KH_1	PF00013.29	3e-64	1	4
C12D8	KH_1	PF00013.29	3e-64	2	4
C12D8	KH_1	PF00013.29	3e-64	3	4
C12D8	KH_1	PF00013.29	3e-64	4	4
C12D8	DUF1897	PF09005.10	5.3e-19	1	1
C12D8	DUF1897	PF09005.10	5.3e-19	1	1
C12D8	DUF1897	PF09005.10	5.3e-19	1	1
C12D8	DUF1897	PF09005.10	5.3e-19	1	1
C12D8	DUF1897	PF09005.10	6e-19	1	1
C12D8	DUF1897	PF09005.10	6.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
C12D8.1c.4	-	1811	NM_001047616	C12D8.1c.4	548 (aa)	NP_001041081	Q2XMZ9
C12D8.1d	-	1718	NR_069262	-	- (aa)	-	-
C12D8.1b	-	2602	NM_073232	C12D8.1b	611 (aa)	NP_505633	Q17936
C12D8.1c.2	-	1866	NM_001047616	C12D8.1c.2	548 (aa)	NP_001041081	Q2XMZ9
C12D8.1c.3	-	1949	NM_001047616	C12D8.1c.3	548 (aa)	NP_001041081	Q2XMZ9
C12D8.1a	-	2025	NM_001047616	C12D8.1a	589 (aa)	NP_001041081	Q17935
C12D8.1c.1	-	1928	NM_001047616	C12D8.1c.1	548 (aa)	NP_001041081	Q2XMZ9

Gene Model

Click here to download WBGene00007534's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00007534's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00007534	C12D8.1	92	44.722	WBGene00022738	ZK418.9	94	45.382
WBGene00007534	C12D8.1	65	46.667	WBGene00016489	C36E6.1	69	43.348
WBGene00007534	C12D8.1	88	40.223	WBGene00019692	M01A10.1	68	44.976

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00007534	C12D8.1	59	41.975	ENSCING00000009628	-	95	36.429	Ciona_intestinalis
WBGene00007534	C12D8.1	86	32.657	ENSCSAVG00000003294	-	91	49.091	Ciona_savignyi
WBGene00007534	C12D8.1	85	34.069	ENSCSAVG00000003258	-	73	38.627	Ciona_savignyi
WBGene00007534	C12D8.1	92	31.208	FBgn0014870	Psi	52	35.917	Drosophila_melanogaster