EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00007617 (Gene tree)
Gene ID: -
Gene Symbol: rrbs-1
Alias: -
Full Name: Ribosome biogenesis regulatory protein homolog
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 1233 bases
Position: chrV:14423776-14425008
Accession: Q9XVT0
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
C15H11	RRS1	PF04939.12	1.5e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
C15H11.9	-	1126	NM_074172	C15H11.9	333 (aa)	NP_506573	Q9XVT0

Gene Model

Click here to download WBGene00007617's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00007617's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00007617	rrbs-1	78	45.283	ENSG00000179041	RRS1	70	45.283	Homo_sapiens
WBGene00007617	rrbs-1	79	47.407	ENSATEG00000011743	rrs1	74	47.407	Anabas_testudineus
WBGene00007617	rrbs-1	93	42.222	ENSANAG00000018116	RRS1	72	45.387	Aotus_nancymaae
WBGene00007617	rrbs-1	99	41.369	ENSAMXG00000037893	rrs1	83	41.369	Astyanax_mexicanus
WBGene00007617	rrbs-1	78	44.528	ENSBTAG00000016716	RRS1	70	44.528	Bos_taurus
WBGene00007617	rrbs-1	78	45.660	ENSCJAG00000022034	RRS1	70	45.660	Callithrix_jacchus
WBGene00007617	rrbs-1	78	44.528	ENSCAFG00000007313	RRS1	70	44.528	Canis_familiaris
WBGene00007617	rrbs-1	78	44.528	ENSCAFG00020020365	-	70	44.528	Canis_lupus_dingo
WBGene00007617	rrbs-1	78	44.528	ENSCAFG00020016049	-	70	44.528	Canis_lupus_dingo
WBGene00007617	rrbs-1	78	44.528	ENSCHIG00000009141	RRS1	70	44.528	Capra_hircus
WBGene00007617	rrbs-1	78	46.415	ENSCPOG00000000647	RRS1	72	46.415	Cavia_porcellus
WBGene00007617	rrbs-1	93	41.587	ENSCCAG00000032186	RRS1	70	45.283	Cebus_capucinus
WBGene00007617	rrbs-1	78	45.283	ENSCATG00000016944	RRS1	70	45.283	Cercocebus_atys
WBGene00007617	rrbs-1	78	44.906	ENSCSAG00000018552	RRS1	70	44.906	Chlorocebus_sabaeus
WBGene00007617	rrbs-1	78	44.906	ENSCHOG00000002455	RRS1	70	44.906	Choloepus_hoffmanni
WBGene00007617	rrbs-1	86	37.864	ENSCPBG00000021374	RRS1	85	37.864	Chrysemys_picta_bellii
WBGene00007617	rrbs-1	80	46.739	ENSCING00000002177	-	82	46.739	Ciona_intestinalis
WBGene00007617	rrbs-1	81	45.848	ENSCSAVG00000011819	-	82	45.848	Ciona_savignyi
WBGene00007617	rrbs-1	78	45.283	ENSCANG00000012718	RRS1	70	45.283	Colobus_angolensis_palliatus
WBGene00007617	rrbs-1	78	45.283	ENSCGRG00001015575	-	74	45.283	Cricetulus_griseus_chok1gshd
WBGene00007617	rrbs-1	78	44.528	ENSCGRG00001002391	-	70	44.528	Cricetulus_griseus_chok1gshd
WBGene00007617	rrbs-1	81	35.870	ENSCSEG00000014750	rrs1	71	35.870	Cynoglossus_semilaevis
WBGene00007617	rrbs-1	81	37.319	ENSCVAG00000017878	rrs1	74	36.594	Cyprinodon_variegatus
WBGene00007617	rrbs-1	85	44.674	ENSDARG00000003941	rrs1	81	45.017	Danio_rerio
WBGene00007617	rrbs-1	78	45.283	ENSDNOG00000017900	RRS1	69	45.283	Dasypus_novemcinctus
WBGene00007617	rrbs-1	65	42.291	ENSDORG00000026331	Rrs1	70	45.596	Dipodomys_ordii
WBGene00007617	rrbs-1	81	40.070	FBgn0052409	CG32409	78	40.070	Drosophila_melanogaster
WBGene00007617	rrbs-1	81	44.000	ENSEBUG00000013506	rrs1	90	43.885	Eptatretus_burgeri
WBGene00007617	rrbs-1	78	44.906	ENSEASG00005001691	RRS1	70	44.906	Equus_asinus_asinus
WBGene00007617	rrbs-1	78	45.283	ENSECAG00000004492	RRS1	77	45.283	Equus_caballus
WBGene00007617	rrbs-1	79	44.074	ENSEEUG00000013719	RRS1	72	44.074	Erinaceus_europaeus
WBGene00007617	rrbs-1	78	45.283	ENSFCAG00000014332	RRS1	70	45.283	Felis_catus
WBGene00007617	rrbs-1	79	37.050	ENSGALG00000030890	RRS1	75	37.050	Gallus_gallus
WBGene00007617	rrbs-1	81	46.570	ENSGACG00000002969	rrs1	75	45.848	Gasterosteus_aculeatus
WBGene00007617	rrbs-1	79	38.768	ENSGAGG00000023718	RRS1	73	39.130	Gopherus_agassizii
WBGene00007617	rrbs-1	78	45.660	ENSGGOG00000026663	RRS1	70	45.660	Gorilla_gorilla
WBGene00007617	rrbs-1	95	42.415	ENSHGLG00000021423	RRS1	70	45.660	Heterocephalus_glaber_female
WBGene00007617	rrbs-1	95	42.415	ENSHGLG00100020640	RRS1	70	45.660	Heterocephalus_glaber_male
WBGene00007617	rrbs-1	97	41.265	ENSHCOG00000015358	rrs1	74	42.391	Hippocampus_comes
WBGene00007617	rrbs-1	99	41.840	ENSIPUG00000014412	rrs1	93	43.953	Ictalurus_punctatus
WBGene00007617	rrbs-1	78	44.906	ENSSTOG00000026310	RRS1	70	44.906	Ictidomys_tridecemlineatus
WBGene00007617	rrbs-1	77	40.234	ENSJJAG00000020395	-	73	40.234	Jaculus_jaculus
WBGene00007617	rrbs-1	78	44.151	ENSJJAG00000011507	-	70	44.151	Jaculus_jaculus
WBGene00007617	rrbs-1	79	43.704	ENSKMAG00000008238	rrs1	77	42.963	Kryptolebias_marmoratus
WBGene00007617	rrbs-1	89	43.564	ENSLACG00000004058	RRS1	90	43.131	Latimeria_chalumnae
WBGene00007617	rrbs-1	79	46.667	ENSLOCG00000017812	rrs1	76	46.667	Lepisosteus_oculatus
WBGene00007617	rrbs-1	78	44.906	ENSLAFG00000015405	RRS1	70	44.906	Loxodonta_africana
WBGene00007617	rrbs-1	78	45.283	ENSMFAG00000042747	RRS1	70	45.283	Macaca_fascicularis
WBGene00007617	rrbs-1	78	45.283	ENSMMUG00000000886	RRS1	70	45.283	Macaca_mulatta
WBGene00007617	rrbs-1	78	45.283	ENSMNEG00000011696	RRS1	70	45.283	Macaca_nemestrina
WBGene00007617	rrbs-1	78	45.283	ENSMLEG00000004794	RRS1	70	45.283	Mandrillus_leucophaeus
WBGene00007617	rrbs-1	79	46.097	ENSMZEG00005004349	RRS1	73	46.097	Maylandia_zebra
WBGene00007617	rrbs-1	78	44.906	ENSMAUG00000005392	Rrs1	71	44.906	Mesocricetus_auratus
WBGene00007617	rrbs-1	78	44.906	ENSMOCG00000015862	Rrs1	67	44.906	Microtus_ochrogaster
WBGene00007617	rrbs-1	78	46.241	ENSMODG00000024952	RRS1	71	46.241	Monodelphis_domestica
WBGene00007617	rrbs-1	78	44.528	MGP_CAROLIEiJ_G0013936	Rrs1	71	44.528	Mus_caroli
WBGene00007617	rrbs-1	78	44.528	ENSMUSG00000061024	Rrs1	70	44.528	Mus_musculus
WBGene00007617	rrbs-1	78	44.151	MGP_PahariEiJ_G0023883	Rrs1	70	44.151	Mus_pahari
WBGene00007617	rrbs-1	78	44.528	MGP_SPRETEiJ_G0014739	Rrs1	70	44.528	Mus_spretus
WBGene00007617	rrbs-1	78	44.906	ENSMPUG00000018626	RRS1	69	44.906	Mustela_putorius_furo
WBGene00007617	rrbs-1	78	44.528	ENSNGAG00000012904	Rrs1	70	44.528	Nannospalax_galili
WBGene00007617	rrbs-1	66	44.292	ENSNLEG00000027730	RRS1	69	44.292	Nomascus_leucogenys
WBGene00007617	rrbs-1	79	46.097	ENSONIG00000014187	rrs1	76	46.097	Oreochromis_niloticus
WBGene00007617	rrbs-1	78	43.774	ENSOANG00000012348	RRS1	69	43.019	Ornithorhynchus_anatinus
WBGene00007617	rrbs-1	80	45.756	ENSOCUG00000013490	RRS1	71	45.926	Oryctolagus_cuniculus
WBGene00007617	rrbs-1	79	38.148	ENSOMEG00000008525	rrs1	72	38.148	Oryzias_melastigma
WBGene00007617	rrbs-1	78	44.528	ENSOGAG00000001085	RRS1	70	44.528	Otolemur_garnettii
WBGene00007617	rrbs-1	78	41.509	ENSOARG00000017417	RRS1	68	41.509	Ovis_aries
WBGene00007617	rrbs-1	78	45.660	ENSPPAG00000024378	RRS1	70	45.660	Pan_paniscus
WBGene00007617	rrbs-1	78	45.283	ENSPPRG00000021408	RRS1	70	45.283	Panthera_pardus
WBGene00007617	rrbs-1	78	45.283	ENSPTRG00000030988	RRS1	70	45.283	Pan_troglodytes
WBGene00007617	rrbs-1	81	42.754	ENSPKIG00000007953	rrs1	78	42.754	Paramormyrops_kingsleyae
WBGene00007617	rrbs-1	78	45.283	ENSPEMG00000014427	Rrs1	70	45.283	Peromyscus_maniculatus_bairdii
WBGene00007617	rrbs-1	78	44.318	ENSPMAG00000006513	rrs1	68	44.318	Petromyzon_marinus
WBGene00007617	rrbs-1	78	44.361	ENSPCIG00000026695	RRS1	72	44.361	Phascolarctos_cinereus
WBGene00007617	rrbs-1	95	41.176	ENSPFOG00000020722	rrs1	80	46.667	Poecilia_formosa
WBGene00007617	rrbs-1	79	37.778	ENSPREG00000019960	rrs1	70	37.778	Poecilia_reticulata
WBGene00007617	rrbs-1	78	44.906	ENSPPYG00000018637	RRS1	87	44.906	Pongo_abelii
WBGene00007617	rrbs-1	95	41.176	ENSPCAG00000009115	RRS1	72	44.649	Procavia_capensis
WBGene00007617	rrbs-1	79	44.981	ENSPNAG00000021707	rrs1	79	43.793	Pygocentrus_nattereri
WBGene00007617	rrbs-1	78	44.528	ENSRNOG00000007240	Rrs1	70	44.528	Rattus_norvegicus
WBGene00007617	rrbs-1	78	45.283	ENSRBIG00000009132	RRS1	70	45.283	Rhinopithecus_bieti
WBGene00007617	rrbs-1	78	45.283	ENSRROG00000013472	RRS1	70	45.283	Rhinopithecus_roxellana
WBGene00007617	rrbs-1	78	45.660	ENSSBOG00000011006	-	73	45.660	Saimiri_boliviensis_boliviensis
WBGene00007617	rrbs-1	78	45.660	ENSSBOG00000012639	-	73	45.660	Saimiri_boliviensis_boliviensis
WBGene00007617	rrbs-1	81	45.652	ENSSMAG00000015226	rrs1	72	45.926	Scophthalmus_maximus
WBGene00007617	rrbs-1	56	47.312	ENSSARG00000006976	RRS1	51	47.312	Sorex_araneus
WBGene00007617	rrbs-1	78	44.906	ENSSSCG00000006214	RRS1	70	44.906	Sus_scrofa
WBGene00007617	rrbs-1	98	41.441	ENSTRUG00000008796	rrs1	81	44.928	Takifugu_rubripes
WBGene00007617	rrbs-1	79	45.725	ENSTNIG00000004026	rrs1	77	45.926	Tetraodon_nigroviridis
WBGene00007617	rrbs-1	78	44.906	ENSTBEG00000014752	RRS1	70	44.906	Tupaia_belangeri
WBGene00007617	rrbs-1	98	40.597	ENSUAMG00000008502	RRS1	70	44.906	Ursus_americanus
WBGene00007617	rrbs-1	78	44.906	ENSVVUG00000018452	RRS1	70	44.906	Vulpes_vulpes
WBGene00007617	rrbs-1	79	46.667	ENSXCOG00000009809	rrs1	74	46.667	Xiphophorus_couchianus