EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00007620 (Gene tree)
Gene ID: -
Gene Symbol: ocrl-1
Alias: -
Full Name: OCRL (Lowe's oculocerebrorenal syndrome protein) homolog
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 12788 bases
Position: chrI:9715321-9728108
Accession: O17590
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
C16C2	Exo_endo_phos	PF03372.23	3.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
C16C2.3b.3	-	1181	-	C16C2.3b.3	271 (aa)	NP_001122421	A5Z2U3
C16C2.3b.2	-	2099	-	C16C2.3b.2	271 (aa)	NP_001122421	A5Z2U3
C16C2.3a	-	2604	NM_001128948	C16C2.3a	768 (aa)	NP_001122420	O17590
C16C2.3b.1	-	2514	-	C16C2.3b.1	271 (aa)	NP_001122421	A5Z2U3

Gene Model

Click here to download WBGene00007620's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00007620's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00007620	ocrl-1	94	30.780	ENSG00000204084	INPP5B	93	30.780	Homo_sapiens
WBGene00007620	ocrl-1	94	30.946	ENSAPOG00000024312	inpp5b	76	30.946	Acanthochromis_polyacanthus
WBGene00007620	ocrl-1	88	30.935	ENSAMEG00000001214	INPP5B	65	30.935	Ailuropoda_melanoleuca
WBGene00007620	ocrl-1	83	31.628	ENSACIG00000017714	inpp5b	72	31.628	Amphilophus_citrinellus
WBGene00007620	ocrl-1	94	30.458	ENSAOCG00000014998	inpp5b	93	30.728	Amphiprion_ocellaris
WBGene00007620	ocrl-1	94	30.214	ENSAPEG00000006094	inpp5b	77	30.481	Amphiprion_percula
WBGene00007620	ocrl-1	83	32.099	ENSATEG00000009966	inpp5b	71	32.099	Anabas_testudineus
WBGene00007620	ocrl-1	87	32.456	ENSAPLG00000015547	INPP5B	66	32.456	Anas_platyrhynchos
WBGene00007620	ocrl-1	85	33.830	ENSACAG00000017122	INPP5B	83	33.830	Anolis_carolinensis
WBGene00007620	ocrl-1	94	31.486	ENSACLG00000027782	inpp5b	93	31.486	Astatotilapia_calliptera
WBGene00007620	ocrl-1	88	31.503	ENSBTAG00000024107	INPP5B	93	31.157	Bos_taurus
WBGene00007620	ocrl-1	94	30.717	ENSCJAG00000002125	INPP5B	69	32.727	Callithrix_jacchus
WBGene00007620	ocrl-1	95	30.106	ENSCAFG00020006305	INPP5B	95	30.178	Canis_lupus_dingo
WBGene00007620	ocrl-1	88	31.647	ENSCHIG00000011431	INPP5B	66	31.503	Capra_hircus
WBGene00007620	ocrl-1	94	30.593	ENSTSYG00000005607	INPP5B	93	30.593	Carlito_syrichta
WBGene00007620	ocrl-1	93	30.137	ENSCPOG00000008650	INPP5B	92	30.137	Cavia_porcellus
WBGene00007620	ocrl-1	94	30.717	ENSCCAG00000001396	INPP5B	93	30.717	Cebus_capucinus
WBGene00007620	ocrl-1	94	30.707	ENSCATG00000037843	INPP5B	82	31.667	Cercocebus_atys
WBGene00007620	ocrl-1	94	30.135	ENSCSAG00000001119	INPP5B	70	30.135	Chlorocebus_sabaeus
WBGene00007620	ocrl-1	77	33.278	ENSCPBG00000018424	INPP5B	62	33.278	Chrysemys_picta_bellii
WBGene00007620	ocrl-1	77	32.680	ENSCING00000004041	-	82	32.680	Ciona_intestinalis
WBGene00007620	ocrl-1	77	32.020	ENSCSAVG00000003433	-	67	31.960	Ciona_savignyi
WBGene00007620	ocrl-1	72	30.325	ENSCANG00000032580	INPP5B	68	30.325	Colobus_angolensis_palliatus
WBGene00007620	ocrl-1	95	30.283	ENSCGRG00001013248	Inpp5b	71	30.283	Cricetulus_griseus_chok1gshd
WBGene00007620	ocrl-1	95	30.283	ENSCGRG00000001885	Inpp5b	77	30.283	Cricetulus_griseus_crigri
WBGene00007620	ocrl-1	68	33.023	ENSCSEG00000019058	inpp5b	85	33.023	Cynoglossus_semilaevis
WBGene00007620	ocrl-1	94	31.301	ENSCVAG00000017401	inpp5b	77	31.301	Cyprinodon_variegatus
WBGene00007620	ocrl-1	92	30.055	ENSDARG00000103683	inpp5b	74	30.055	Danio_rerio
WBGene00007620	ocrl-1	88	31.350	ENSDNOG00000009142	INPP5B	86	31.350	Dasypus_novemcinctus
WBGene00007620	ocrl-1	95	30.429	ENSDORG00000008793	Inpp5b	71	30.429	Dipodomys_ordii
WBGene00007620	ocrl-1	90	31.015	FBgn0023508	Ocrl	78	31.381	Drosophila_melanogaster
WBGene00007620	ocrl-1	86	32.211	ENSEBUG00000010001	inpp5b	80	32.211	Eptatretus_burgeri
WBGene00007620	ocrl-1	79	31.442	ENSEBUG00000012693	-	66	31.442	Eptatretus_burgeri
WBGene00007620	ocrl-1	94	30.717	ENSEASG00005012326	INPP5B	97	30.748	Equus_asinus_asinus
WBGene00007620	ocrl-1	94	30.988	ENSECAG00000019874	INPP5B	78	30.988	Equus_caballus
WBGene00007620	ocrl-1	80	31.596	ENSEEUG00000009492	INPP5B	60	31.596	Erinaceus_europaeus
WBGene00007620	ocrl-1	93	30.068	ENSELUG00000018233	inpp5b	86	30.417	Esox_lucius
WBGene00007620	ocrl-1	94	30.556	ENSFCAG00000011021	INPP5B	77	30.556	Felis_catus
WBGene00007620	ocrl-1	84	31.611	ENSFALG00000000990	INPP5B	76	31.611	Ficedula_albicollis
WBGene00007620	ocrl-1	94	30.163	ENSFDAG00000003913	INPP5B	72	30.163	Fukomys_damarensis
WBGene00007620	ocrl-1	93	30.233	ENSFHEG00000001022	inpp5b	79	30.233	Fundulus_heteroclitus
WBGene00007620	ocrl-1	85	30.428	ENSGMOG00000015543	inpp5b	72	30.428	Gadus_morhua
WBGene00007620	ocrl-1	84	32.929	ENSGALG00000001606	INPP5B	71	32.879	Gallus_gallus
WBGene00007620	ocrl-1	92	30.194	ENSGAFG00000008434	inpp5b	84	30.194	Gambusia_affinis
WBGene00007620	ocrl-1	94	30.120	ENSGACG00000013866	inpp5b	71	30.120	Gasterosteus_aculeatus
WBGene00007620	ocrl-1	82	32.868	ENSGAGG00000014973	INPP5B	70	32.868	Gopherus_agassizii
WBGene00007620	ocrl-1	94	30.593	ENSGGOG00000001150	INPP5B	70	32.554	Gorilla_gorilla
WBGene00007620	ocrl-1	94	31.486	ENSHBUG00000009350	inpp5b	93	31.486	Haplochromis_burtoni
WBGene00007620	ocrl-1	94	30.217	ENSHGLG00000011716	INPP5B	70	30.217	Heterocephalus_glaber_female
WBGene00007620	ocrl-1	94	30.217	ENSHGLG00100010202	INPP5B	76	30.217	Heterocephalus_glaber_male
WBGene00007620	ocrl-1	83	32.061	ENSHCOG00000006376	inpp5b	83	32.061	Hippocampus_comes
WBGene00007620	ocrl-1	94	30.801	ENSIPUG00000015075	inpp5b	81	30.801	Ictalurus_punctatus
WBGene00007620	ocrl-1	94	30.997	ENSSTOG00000001670	INPP5B	70	30.997	Ictidomys_tridecemlineatus
WBGene00007620	ocrl-1	95	30.790	ENSJJAG00000024109	Inpp5b	70	30.790	Jaculus_jaculus
WBGene00007620	ocrl-1	85	33.132	ENSKMAG00000013537	inpp5b	69	33.132	Kryptolebias_marmoratus
WBGene00007620	ocrl-1	85	31.737	ENSLBEG00000027451	inpp5b	69	31.737	Labrus_bergylta
WBGene00007620	ocrl-1	83	32.572	ENSLACG00000009072	INPP5B	67	32.572	Latimeria_chalumnae
WBGene00007620	ocrl-1	84	31.634	ENSLOCG00000003290	inpp5b	69	31.634	Lepisosteus_oculatus
WBGene00007620	ocrl-1	93	30.590	ENSLAFG00000017572	INPP5B	92	30.590	Loxodonta_africana
WBGene00007620	ocrl-1	94	30.645	ENSMFAG00000034447	INPP5B	95	30.645	Macaca_fascicularis
WBGene00007620	ocrl-1	94	30.405	ENSMMUG00000023277	INPP5B	94	32.049	Macaca_mulatta
WBGene00007620	ocrl-1	72	30.561	ENSMNEG00000033845	INPP5B	69	30.686	Macaca_nemestrina
WBGene00007620	ocrl-1	94	30.780	ENSMLEG00000034265	INPP5B	93	30.780	Mandrillus_leucophaeus
WBGene00007620	ocrl-1	94	30.080	ENSMAMG00000007345	inpp5b	88	30.080	Mastacembelus_armatus
WBGene00007620	ocrl-1	94	31.258	ENSMZEG00005006964	inpp5b	93	31.258	Maylandia_zebra
WBGene00007620	ocrl-1	84	32.777	ENSMGAG00000002943	INPP5B	64	32.777	Meleagris_gallopavo
WBGene00007620	ocrl-1	93	30.165	ENSMAUG00000020871	Inpp5b	70	30.165	Mesocricetus_auratus
WBGene00007620	ocrl-1	94	30.541	ENSMICG00000011984	INPP5B	77	30.541	Microcebus_murinus
WBGene00007620	ocrl-1	95	30.780	ENSMOCG00000017902	Inpp5b	71	30.780	Microtus_ochrogaster
WBGene00007620	ocrl-1	92	30.194	ENSMMOG00000000762	inpp5b	80	30.194	Mola_mola
WBGene00007620	ocrl-1	88	31.640	ENSMODG00000017736	INPP5B	66	31.640	Monodelphis_domestica
WBGene00007620	ocrl-1	94	30.148	ENSMALG00000012371	inpp5b	77	30.148	Monopterus_albus
WBGene00007620	ocrl-1	95	30.975	MGP_CAROLIEiJ_G0026450	Inpp5b	70	30.975	Mus_caroli
WBGene00007620	ocrl-1	95	30.522	ENSMUSG00000028894	Inpp5b	70	30.522	Mus_musculus
WBGene00007620	ocrl-1	95	30.522	MGP_SPRETEiJ_G0027429	Inpp5b	70	30.522	Mus_spretus
WBGene00007620	ocrl-1	93	30.254	ENSMPUG00000014529	INPP5B	88	30.254	Mustela_putorius_furo
WBGene00007620	ocrl-1	88	30.535	ENSMLUG00000000971	INPP5B	66	30.535	Myotis_lucifugus
WBGene00007620	ocrl-1	95	30.574	ENSNGAG00000002123	Inpp5b	70	30.574	Nannospalax_galili
WBGene00007620	ocrl-1	72	32.316	ENSNLEG00000011699	INPP5B	70	32.316	Nomascus_leucogenys
WBGene00007620	ocrl-1	87	31.924	ENSOPRG00000012764	INPP5B	65	31.924	Ochotona_princeps
WBGene00007620	ocrl-1	94	30.634	ENSODEG00000007989	INPP5B	73	30.634	Octodon_degus
WBGene00007620	ocrl-1	94	30.623	ENSONIG00000016229	inpp5b	72	30.623	Oreochromis_niloticus
WBGene00007620	ocrl-1	73	32.586	ENSOANG00000002045	INPP5B	55	35.020	Ornithorhynchus_anatinus
WBGene00007620	ocrl-1	94	30.831	ENSOCUG00000005395	INPP5B	71	30.831	Oryctolagus_cuniculus
WBGene00007620	ocrl-1	95	30.161	ENSORLG00000014438	inpp5b	77	30.161	Oryzias_latipes
WBGene00007620	ocrl-1	84	31.165	ENSORLG00020019597	inpp5b	69	31.165	Oryzias_latipes_hni
WBGene00007620	ocrl-1	84	31.014	ENSORLG00015000124	inpp5b	69	31.014	Oryzias_latipes_hsok
WBGene00007620	ocrl-1	94	31.156	ENSOMEG00000018665	inpp5b	77	31.156	Oryzias_melastigma
WBGene00007620	ocrl-1	95	30.201	ENSOGAG00000012103	INPP5B	88	30.094	Otolemur_garnettii
WBGene00007620	ocrl-1	88	31.647	ENSOARG00000019926	INPP5B	70	31.548	Ovis_aries
WBGene00007620	ocrl-1	72	30.341	ENSPPAG00000007165	INPP5B	69	30.341	Pan_paniscus
WBGene00007620	ocrl-1	94	30.423	ENSPPRG00000006732	INPP5B	95	30.423	Panthera_pardus
WBGene00007620	ocrl-1	94	30.291	ENSPTIG00000020799	INPP5B	78	30.291	Panthera_tigris_altaica
WBGene00007620	ocrl-1	94	30.686	ENSPTRG00000030681	INPP5B	95	30.686	Pan_troglodytes
WBGene00007620	ocrl-1	94	30.676	ENSPANG00000000705	INPP5B	78	30.676	Papio_anubis
WBGene00007620	ocrl-1	93	31.918	ENSPKIG00000004669	inpp5b	79	31.918	Paramormyrops_kingsleyae
WBGene00007620	ocrl-1	87	32.650	ENSPSIG00000005118	INPP5B	74	32.650	Pelodiscus_sinensis
WBGene00007620	ocrl-1	71	31.646	ENSPMGG00000004124	inpp5b	92	31.646	Periophthalmus_magnuspinnatus
WBGene00007620	ocrl-1	88	31.350	ENSPEMG00000021223	Inpp5b	66	31.350	Peromyscus_maniculatus_bairdii
WBGene00007620	ocrl-1	88	30.914	ENSPCIG00000025724	INPP5B	87	30.870	Phascolarctos_cinereus
WBGene00007620	ocrl-1	83	31.240	ENSPMEG00000013640	inpp5b	78	31.283	Poecilia_mexicana
WBGene00007620	ocrl-1	94	30.632	ENSPCOG00000026418	INPP5B	69	30.632	Propithecus_coquereli
WBGene00007620	ocrl-1	94	31.063	ENSPVAG00000010155	INPP5B	70	31.063	Pteropus_vampyrus
WBGene00007620	ocrl-1	94	31.486	ENSPNYG00000013593	inpp5b	93	31.486	Pundamilia_nyererei
WBGene00007620	ocrl-1	95	31.090	ENSRNOG00000048506	Inpp5b	76	31.183	Rattus_norvegicus
WBGene00007620	ocrl-1	91	31.373	ENSRNOG00000049397	LOC103689941	88	31.373	Rattus_norvegicus
WBGene00007620	ocrl-1	84	31.515	ENSRBIG00000035731	INPP5B	68	31.515	Rhinopithecus_bieti
WBGene00007620	ocrl-1	94	30.645	ENSRROG00000035588	INPP5B	93	30.645	Rhinopithecus_roxellana
WBGene00007620	ocrl-1	88	30.580	ENSSHAG00000014171	INPP5B	72	30.725	Sarcophilus_harrisii
WBGene00007620	ocrl-1	92	31.171	ENSSFOG00015006031	inpp5b	78	31.171	Scleropages_formosus
WBGene00007620	ocrl-1	94	30.094	ENSSMAG00000005147	inpp5b	76	30.094	Scophthalmus_maximus
WBGene00007620	ocrl-1	94	30.470	ENSSDUG00000009812	inpp5b	77	30.470	Seriola_dumerili
WBGene00007620	ocrl-1	94	30.470	ENSSLDG00000000098	inpp5b	81	30.470	Seriola_lalandi_dorsalis
WBGene00007620	ocrl-1	86	32.392	ENSSPUG00000003982	INPP5B	73	32.392	Sphenodon_punctatus
WBGene00007620	ocrl-1	94	30.593	ENSSPAG00000012491	inpp5b	81	30.593	Stegastes_partitus
WBGene00007620	ocrl-1	83	31.066	ENSSSCG00000003642	INPP5B	74	31.915	Sus_scrofa
WBGene00007620	ocrl-1	84	32.473	ENSTGUG00000001481	-	88	32.473	Taeniopygia_guttata
WBGene00007620	ocrl-1	74	33.448	ENSTGUG00000014772	-	94	33.448	Taeniopygia_guttata
WBGene00007620	ocrl-1	78	33.224	ENSTRUG00000004677	inpp5b	67	33.224	Takifugu_rubripes
WBGene00007620	ocrl-1	88	31.304	ENSUAMG00000006142	INPP5B	87	31.304	Ursus_americanus
WBGene00007620	ocrl-1	88	31.304	ENSUMAG00000021256	INPP5B	87	31.304	Ursus_maritimus
WBGene00007620	ocrl-1	94	30.251	ENSVVUG00000023116	INPP5B	93	31.019	Vulpes_vulpes
WBGene00007620	ocrl-1	82	31.620	ENSXETG00000014435	inpp5b	90	31.476	Xenopus_tropicalis
WBGene00007620	ocrl-1	83	30.603	ENSXCOG00000001432	inpp5b	76	30.603	Xiphophorus_couchianus