EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: WBGene00007624 (Gene tree)
Gene ID: -
Gene Symbol: hrde-1
Alias: -
Full Name: Heritable RNAi Deficient
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: confidence
Strand: Minus strand
Length: 3823 bases
Position: chrIII:4172337-4176159
Accession: NP_497834
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
C16C10	PAZ	PF02170.22	8.9e-17	1	1
C16C10	Piwi	PF02171.17	1.4e-101	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
C16C10.3	-	3537	NM_065433	C16C10.3	1032 (aa)	NP_497834	Q09249

Gene Model

Click here to download WBGene00007624's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00007624's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00007624	hrde-1	99	40.229	WBGene00021711	wago-11	100	40.987
WBGene00007624	hrde-1	99	59.843	WBGene00020707	wago-10	98	59.647
WBGene00007624	hrde-1	99	39.098	WBGene00019862	nrde-3	99	39.154