EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00007972 (Gene tree)
Gene ID: -
Gene Symbol: prp-4
Alias: -
Full Name: Yeast PRP (Splicing factor) related
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 2305 bases
Position: chrI:8733413-8735717
Accession: Q93339
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
C36B1	PRP4	PF08799.11	4.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
C36B1.5	-	1616	NM_059962	C36B1.5	496 (aa)	NP_492363	Q93339

Gene Model

Click here to download WBGene00007972's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00007972's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00007972	prp-4	91	45.254	ENSG00000136875	PRPF4	87	45.254	Homo_sapiens
WBGene00007972	prp-4	91	42.794	ENSAPOG00000014132	prpf4	91	42.794	Acanthochromis_polyacanthus
WBGene00007972	prp-4	96	44.000	ENSAMEG00000013048	PRPF4	88	44.000	Ailuropoda_melanoleuca
WBGene00007972	prp-4	95	44.492	ENSACIG00000005579	prpf4	92	44.492	Amphilophus_citrinellus
WBGene00007972	prp-4	95	43.552	ENSAOCG00000005457	prpf4	92	43.552	Amphiprion_ocellaris
WBGene00007972	prp-4	95	43.552	ENSAPEG00000000776	prpf4	92	43.552	Amphiprion_percula
WBGene00007972	prp-4	91	45.575	ENSATEG00000023013	prpf4	88	45.575	Anabas_testudineus
WBGene00007972	prp-4	91	44.956	ENSAPLG00000006534	PRPF4	85	44.956	Anas_platyrhynchos
WBGene00007972	prp-4	89	46.591	ENSACAG00000015110	PRPF4	84	46.591	Anolis_carolinensis
WBGene00007972	prp-4	96	44.000	ENSANAG00000022464	PRPF4	87	44.093	Aotus_nancymaae
WBGene00007972	prp-4	96	44.211	ENSACLG00000019031	prpf4	92	44.211	Astatotilapia_calliptera
WBGene00007972	prp-4	88	36.444	ENSAMXG00000006756	prpf4	93	39.666	Astyanax_mexicanus
WBGene00007972	prp-4	96	44.211	ENSBTAG00000004571	PRPF4	90	44.211	Bos_taurus
WBGene00007972	prp-4	96	44.000	ENSCJAG00000017856	PRPF4	90	44.000	Callithrix_jacchus
WBGene00007972	prp-4	96	44.000	ENSCAFG00000003224	PRPF4	88	44.000	Canis_familiaris
WBGene00007972	prp-4	96	44.000	ENSCAFG00020022637	PRPF4	91	44.000	Canis_lupus_dingo
WBGene00007972	prp-4	96	44.211	ENSCHIG00000024648	-	90	44.304	Capra_hircus
WBGene00007972	prp-4	96	44.000	ENSTSYG00000010366	PRPF4	90	44.000	Carlito_syrichta
WBGene00007972	prp-4	91	43.478	ENSCAPG00000008935	PRPF4	91	43.367	Cavia_aperea
WBGene00007972	prp-4	96	43.579	ENSCPOG00000010747	-	90	43.579	Cavia_porcellus
WBGene00007972	prp-4	88	42.661	ENSCPOG00000014729	-	83	42.661	Cavia_porcellus
WBGene00007972	prp-4	96	44.000	ENSCCAG00000028990	PRPF4	90	44.000	Cebus_capucinus
WBGene00007972	prp-4	96	44.000	ENSCATG00000021552	PRPF4	90	44.093	Cercocebus_atys
WBGene00007972	prp-4	96	43.789	ENSCLAG00000013448	PRPF4	90	43.882	Chinchilla_lanigera
WBGene00007972	prp-4	91	45.111	ENSCHOG00000007233	PRPF4	97	45.682	Choloepus_hoffmanni
WBGene00007972	prp-4	96	44.660	ENSCPBG00000019136	PRPF4	68	44.000	Chrysemys_picta_bellii
WBGene00007972	prp-4	99	42.688	ENSCING00000001299	-	98	42.688	Ciona_intestinalis
WBGene00007972	prp-4	97	42.127	ENSCSAVG00000009178	-	99	43.013	Ciona_savignyi
WBGene00007972	prp-4	96	44.000	ENSCANG00000003246	PRPF4	90	44.000	Colobus_angolensis_palliatus
WBGene00007972	prp-4	96	44.000	ENSCGRG00001016992	Prpf4	90	44.093	Cricetulus_griseus_chok1gshd
WBGene00007972	prp-4	96	44.000	ENSCGRG00000017560	Prpf4	90	44.093	Cricetulus_griseus_crigri
WBGene00007972	prp-4	91	46.578	ENSCSEG00000020451	prpf4	89	46.389	Cynoglossus_semilaevis
WBGene00007972	prp-4	94	45.824	ENSDARG00000067639	prpf4	92	45.824	Danio_rerio
WBGene00007972	prp-4	96	43.789	ENSDNOG00000013203	PRPF4	90	43.882	Dasypus_novemcinctus
WBGene00007972	prp-4	96	44.211	ENSDORG00000026275	Prpf4	90	44.211	Dipodomys_ordii
WBGene00007972	prp-4	95	43.064	FBgn0036733	U4-U6-60K	87	43.064	Drosophila_melanogaster
WBGene00007972	prp-4	96	44.000	ENSETEG00000020389	PRPF4	90	44.093	Echinops_telfairi
WBGene00007972	prp-4	99	43.478	ENSEBUG00000015229	prpf4	87	43.478	Eptatretus_burgeri
WBGene00007972	prp-4	96	44.000	ENSEASG00005022678	PRPF4	90	44.000	Equus_asinus_asinus
WBGene00007972	prp-4	96	44.000	ENSECAG00000007072	PRPF4	90	44.000	Equus_caballus
WBGene00007972	prp-4	69	54.762	ENSEEUG00000007480	PRPF4	77	39.943	Erinaceus_europaeus
WBGene00007972	prp-4	96	44.000	ENSELUG00000007510	prpf4	93	44.000	Esox_lucius
WBGene00007972	prp-4	96	44.000	ENSFCAG00000005514	PRPF4	90	44.000	Felis_catus
WBGene00007972	prp-4	89	46.950	ENSFALG00000005423	PRPF4	73	46.950	Ficedula_albicollis
WBGene00007972	prp-4	96	44.000	ENSFDAG00000005839	PRPF4	90	44.093	Fukomys_damarensis
WBGene00007972	prp-4	96	45.053	ENSFHEG00000001300	prpf4	92	45.053	Fundulus_heteroclitus
WBGene00007972	prp-4	96	44.632	ENSGALG00000008857	PRPF4	88	44.632	Gallus_gallus
WBGene00007972	prp-4	59	40.476	ENSGAFG00000012164	prpf4	60	40.476	Gambusia_affinis
WBGene00007972	prp-4	95	41.719	ENSGACG00000015476	prpf4	93	41.509	Gasterosteus_aculeatus
WBGene00007972	prp-4	96	44.211	ENSGAGG00000025029	PRPF4	87	44.304	Gopherus_agassizii
WBGene00007972	prp-4	91	45.254	ENSGGOG00000006943	PRPF4	87	45.254	Gorilla_gorilla
WBGene00007972	prp-4	96	44.211	ENSHBUG00000000562	prpf4	93	43.681	Haplochromis_burtoni
WBGene00007972	prp-4	91	39.121	ENSHGLG00000016628	-	88	39.121	Heterocephalus_glaber_female
WBGene00007972	prp-4	96	43.908	ENSHGLG00000015191	PRPF4	90	44.000	Heterocephalus_glaber_female
WBGene00007972	prp-4	89	36.697	ENSHGLG00000003838	-	81	38.350	Heterocephalus_glaber_female
WBGene00007972	prp-4	89	36.697	ENSHGLG00100005571	-	81	38.350	Heterocephalus_glaber_male
WBGene00007972	prp-4	91	45.695	ENSIPUG00000017956	PRPF4	89	45.695	Ictalurus_punctatus
WBGene00007972	prp-4	96	44.211	ENSSTOG00000027833	PRPF4	90	44.211	Ictidomys_tridecemlineatus
WBGene00007972	prp-4	96	44.000	ENSJJAG00000008838	Prpf4	90	44.093	Jaculus_jaculus
WBGene00007972	prp-4	95	44.915	ENSKMAG00000013236	prpf4	92	44.915	Kryptolebias_marmoratus
WBGene00007972	prp-4	95	43.671	ENSLBEG00000020611	prpf4	93	43.671	Labrus_bergylta
WBGene00007972	prp-4	96	42.138	ENSLACG00000016317	PRPF4	90	42.227	Latimeria_chalumnae
WBGene00007972	prp-4	95	45.032	ENSLOCG00000000581	prpf4	93	45.032	Lepisosteus_oculatus
WBGene00007972	prp-4	96	44.000	ENSLAFG00000018225	PRPF4	90	44.000	Loxodonta_africana
WBGene00007972	prp-4	96	43.789	ENSMFAG00000039397	PRPF4	90	43.882	Macaca_fascicularis
WBGene00007972	prp-4	96	44.000	ENSMMUG00000005844	PRPF4	90	44.093	Macaca_mulatta
WBGene00007972	prp-4	96	39.666	ENSMNEG00000033737	PRPF4	89	39.749	Macaca_nemestrina
WBGene00007972	prp-4	96	44.000	ENSMLEG00000040284	PRPF4	90	44.093	Mandrillus_leucophaeus
WBGene00007972	prp-4	96	43.908	ENSMAMG00000020141	prpf4	93	43.908	Mastacembelus_armatus
WBGene00007972	prp-4	96	44.211	ENSMZEG00005023205	prpf4	92	44.211	Maylandia_zebra
WBGene00007972	prp-4	96	44.421	ENSMGAG00000001796	PRPF4	88	44.421	Meleagris_gallopavo
WBGene00007972	prp-4	96	44.000	ENSMAUG00000018022	Prpf4	90	44.093	Mesocricetus_auratus
WBGene00007972	prp-4	96	44.211	ENSMICG00000015022	PRPF4	90	44.304	Microcebus_murinus
WBGene00007972	prp-4	96	44.211	ENSMOCG00000018273	Prpf4	90	44.304	Microtus_ochrogaster
WBGene00007972	prp-4	85	45.606	ENSMMOG00000021177	prpf4	93	44.000	Mola_mola
WBGene00007972	prp-4	96	43.841	ENSMODG00000025096	-	88	43.841	Monodelphis_domestica
WBGene00007972	prp-4	96	43.633	ENSMODG00000004444	-	91	43.633	Monodelphis_domestica
WBGene00007972	prp-4	95	43.975	ENSMALG00000013624	prpf4	92	43.975	Monopterus_albus
WBGene00007972	prp-4	96	44.000	MGP_CAROLIEiJ_G0026078	Prpf4	90	44.093	Mus_caroli
WBGene00007972	prp-4	96	44.000	ENSMUSG00000066148	Prpf4	90	44.093	Mus_musculus
WBGene00007972	prp-4	96	44.000	MGP_PahariEiJ_G0028413	Prpf4	90	44.000	Mus_pahari
WBGene00007972	prp-4	96	44.000	MGP_SPRETEiJ_G0027042	Prpf4	90	44.093	Mus_spretus
WBGene00007972	prp-4	96	44.000	ENSMPUG00000007883	PRPF4	90	44.000	Mustela_putorius_furo
WBGene00007972	prp-4	96	44.000	ENSMLUG00000015309	-	88	44.000	Myotis_lucifugus
WBGene00007972	prp-4	96	43.158	ENSMLUG00000008626	-	88	43.158	Myotis_lucifugus
WBGene00007972	prp-4	96	41.474	ENSNGAG00000000468	Prpf4	90	41.561	Nannospalax_galili
WBGene00007972	prp-4	96	44.211	ENSNBRG00000007972	prpf4	92	44.211	Neolamprologus_brichardi
WBGene00007972	prp-4	96	44.000	ENSNLEG00000016647	PRPF4	90	44.000	Nomascus_leucogenys
WBGene00007972	prp-4	96	43.633	ENSMEUG00000013256	PRPF4	92	43.633	Notamacropus_eugenii
WBGene00007972	prp-4	96	44.000	ENSOPRG00000005302	PRPF4	90	44.000	Ochotona_princeps
WBGene00007972	prp-4	96	44.000	ENSODEG00000018147	PRPF4	90	44.093	Octodon_degus
WBGene00007972	prp-4	91	45.354	ENSONIG00000012671	prpf4	88	45.354	Oreochromis_niloticus
WBGene00007972	prp-4	96	44.000	ENSOCUG00000005046	PRPF4	90	44.000	Oryctolagus_cuniculus
WBGene00007972	prp-4	91	45.475	ENSORLG00000019641	prpf4	89	45.475	Oryzias_latipes
WBGene00007972	prp-4	91	45.475	ENSORLG00020019438	prpf4	89	45.475	Oryzias_latipes_hni
WBGene00007972	prp-4	95	44.915	ENSOMEG00000020941	prpf4	93	44.915	Oryzias_melastigma
WBGene00007972	prp-4	95	43.038	ENSOGAG00000007802	PRPF4	88	43.038	Otolemur_garnettii
WBGene00007972	prp-4	96	44.211	ENSOARG00000006319	PRPF4	87	44.304	Ovis_aries
WBGene00007972	prp-4	91	45.254	ENSPPAG00000041797	PRPF4	87	45.254	Pan_paniscus
WBGene00007972	prp-4	96	44.000	ENSPPRG00000014360	PRPF4	90	44.000	Panthera_pardus
WBGene00007972	prp-4	96	44.000	ENSPTIG00000009574	PRPF4	90	44.000	Panthera_tigris_altaica
WBGene00007972	prp-4	91	45.254	ENSPTRG00000021274	PRPF4	87	45.254	Pan_troglodytes
WBGene00007972	prp-4	96	44.000	ENSPANG00000025776	PRPF4	87	44.000	Papio_anubis
WBGene00007972	prp-4	96	44.770	ENSPKIG00000017259	prpf4	94	44.770	Paramormyrops_kingsleyae
WBGene00007972	prp-4	96	44.842	ENSPSIG00000010713	PRPF4	83	44.937	Pelodiscus_sinensis
WBGene00007972	prp-4	85	36.866	ENSPMGG00000000997	prpf4	81	37.639	Periophthalmus_magnuspinnatus
WBGene00007972	prp-4	96	44.000	ENSPEMG00000024115	Prpf4	90	44.093	Peromyscus_maniculatus_bairdii
WBGene00007972	prp-4	96	43.633	ENSPCIG00000003821	PRPF4	92	43.633	Phascolarctos_cinereus
WBGene00007972	prp-4	91	41.667	ENSPFOG00000013524	prpf4	88	41.667	Poecilia_formosa
WBGene00007972	prp-4	55	41.971	ENSPLAG00000011620	prpf4	82	41.577	Poecilia_latipinna
WBGene00007972	prp-4	74	42.254	ENSPMEG00000006813	prpf4	83	42.254	Poecilia_mexicana
WBGene00007972	prp-4	96	44.000	ENSPCAG00000002561	PRPF4	92	44.000	Procavia_capensis
WBGene00007972	prp-4	96	44.000	ENSPCOG00000011975	PRPF4	90	44.000	Propithecus_coquereli
WBGene00007972	prp-4	96	42.316	ENSPVAG00000004708	PRPF4	90	42.316	Pteropus_vampyrus
WBGene00007972	prp-4	96	44.211	ENSPNYG00000008013	prpf4	92	44.211	Pundamilia_nyererei
WBGene00007972	prp-4	91	45.011	ENSPNAG00000000697	prpf4	89	45.011	Pygocentrus_nattereri
WBGene00007972	prp-4	96	44.000	ENSRNOG00000014777	Prpf4	90	44.093	Rattus_norvegicus
WBGene00007972	prp-4	96	44.000	ENSRBIG00000040221	PRPF4	90	44.000	Rhinopithecus_bieti
WBGene00007972	prp-4	96	44.000	ENSRROG00000040240	PRPF4	90	44.000	Rhinopithecus_roxellana
WBGene00007972	prp-4	96	43.633	ENSSHAG00000017658	PRPF4	91	43.633	Sarcophilus_harrisii
WBGene00007972	prp-4	91	45.796	ENSSFOG00015008963	prpf4	89	45.796	Scleropages_formosus
WBGene00007972	prp-4	96	44.375	ENSSMAG00000008889	prpf4	93	44.375	Scophthalmus_maximus
WBGene00007972	prp-4	90	43.973	ENSSDUG00000022083	prpf4	87	43.681	Seriola_dumerili
WBGene00007972	prp-4	90	43.750	ENSSLDG00000008115	prpf4	87	43.459	Seriola_lalandi_dorsalis
WBGene00007972	prp-4	89	46.136	ENSSPUG00000015582	PRPF4	85	46.136	Sphenodon_punctatus
WBGene00007972	prp-4	95	40.756	ENSSPAG00000011286	prpf4	91	40.756	Stegastes_partitus
WBGene00007972	prp-4	96	44.000	ENSSSCG00000024648	PRPF4	90	44.000	Sus_scrofa
WBGene00007972	prp-4	91	44.956	ENSTGUG00000002623	PRPF4	93	44.956	Taeniopygia_guttata
WBGene00007972	prp-4	94	41.880	ENSTRUG00000008853	prpf4	92	45.299	Takifugu_rubripes
WBGene00007972	prp-4	99	43.366	ENSTNIG00000013250	prpf4	99	43.366	Tetraodon_nigroviridis
WBGene00007972	prp-4	96	40.421	ENSTBEG00000000821	PRPF4	90	40.421	Tupaia_belangeri
WBGene00007972	prp-4	91	43.373	ENSTTRG00000003246	PRPF4	84	43.373	Tursiops_truncatus
WBGene00007972	prp-4	53	39.464	ENSUAMG00000018288	PRPF4	74	39.464	Ursus_americanus
WBGene00007972	prp-4	96	43.789	ENSUMAG00000019375	PRPF4	90	43.882	Ursus_maritimus
WBGene00007972	prp-4	96	44.000	ENSVPAG00000005281	PRPF4	90	44.093	Vicugna_pacos
WBGene00007972	prp-4	96	43.633	ENSVVUG00000002476	PRPF4	94	43.633	Vulpes_vulpes
WBGene00007972	prp-4	63	36.859	ENSXCOG00000006101	prpf4	81	37.360	Xiphophorus_couchianus
WBGene00007972	prp-4	82	38.795	ENSXMAG00000002750	prpf4	92	38.316	Xiphophorus_maculatus