EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00008119 (Gene tree)
Gene ID: -
Gene Symbol: C46F11.4
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 6779 bases
Position: chrIII:3657716-3664494
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
C46F11	DEAD	PF00270.29	3.4e-47	1	1
C46F11	DEAD	PF00270.29	3.4e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
C46F11.4.1	-	2728	NM_065342	C46F11.4.1	811 (aa)	NP_497743	Q93382
C46F11.4.2	-	2538	NM_065342	C46F11.4.2	811 (aa)	NP_497743	Q93382

Gene Model

Click here to download WBGene00008119's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00008119's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00008119	C46F11.4	50	34.579	WBGene00001598	glh-1	54	34.515
WBGene00008119	C46F11.4	57	38.578	WBGene00010260	ddx-17	82	38.578
WBGene00008119	C46F11.4	55	36.638	WBGene00019245	sacy-1	70	36.638
WBGene00008119	C46F11.4	69	38.811	WBGene00018776	F53H1.1	60	42.070

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00008119	C46F11.4	78	52.895	ENSG00000198231	DDX42	94	45.098	Homo_sapiens
WBGene00008119	C46F11.4	69	57.618	ENSAPOG00000017675	ddx42	69	52.067	Acanthochromis_polyacanthus
WBGene00008119	C46F11.4	78	52.895	ENSAMEG00000003200	DDX42	64	52.673	Ailuropoda_melanoleuca
WBGene00008119	C46F11.4	62	58.869	ENSACIG00000007376	ddx42	74	54.849	Amphilophus_citrinellus
WBGene00008119	C46F11.4	69	58.053	ENSAOCG00000003520	ddx42	67	52.067	Amphiprion_ocellaris
WBGene00008119	C46F11.4	69	58.053	ENSAPEG00000000984	ddx42	67	52.374	Amphiprion_percula
WBGene00008119	C46F11.4	79	53.333	ENSATEG00000022920	ddx42	68	52.067	Anabas_testudineus
WBGene00008119	C46F11.4	78	53.365	ENSAPLG00000010544	DDX42	64	53.302	Anas_platyrhynchos
WBGene00008119	C46F11.4	79	52.851	ENSACAG00000003994	DDX42	68	51.376	Anolis_carolinensis
WBGene00008119	C46F11.4	78	52.739	ENSANAG00000035693	DDX42	83	52.464	Aotus_nancymaae
WBGene00008119	C46F11.4	69	58.230	ENSACLG00000025113	ddx42	66	53.931	Astatotilapia_calliptera
WBGene00008119	C46F11.4	81	51.286	ENSAMXG00000011435	ddx42	65	51.149	Astyanax_mexicanus
WBGene00008119	C46F11.4	78	51.956	ENSBTAG00000021058	DDX42	82	51.669	Bos_taurus
WBGene00008119	C46F11.4	79	52.705	ENSCJAG00000019649	DDX42	81	52.623	Callithrix_jacchus
WBGene00008119	C46F11.4	78	52.590	ENSCAFG00000012818	DDX42	64	52.366	Canis_familiaris
WBGene00008119	C46F11.4	78	52.895	ENSCAFG00020026631	DDX42	64	52.673	Canis_lupus_dingo
WBGene00008119	C46F11.4	78	53.052	ENSCHIG00000014431	DDX42	65	52.830	Capra_hircus
WBGene00008119	C46F11.4	78	52.895	ENSTSYG00000001380	DDX42	74	51.256	Carlito_syrichta
WBGene00008119	C46F11.4	60	46.721	ENSCAPG00000013621	DDX42	68	47.695	Cavia_aperea
WBGene00008119	C46F11.4	78	52.739	ENSCPOG00000005633	DDX42	64	52.516	Cavia_porcellus
WBGene00008119	C46F11.4	79	52.019	ENSCCAG00000020612	DDX42	82	52.623	Cebus_capucinus
WBGene00008119	C46F11.4	78	52.895	ENSCATG00000030490	DDX42	78	52.441	Cercocebus_atys
WBGene00008119	C46F11.4	78	52.895	ENSCLAG00000003497	DDX42	64	52.673	Chinchilla_lanigera
WBGene00008119	C46F11.4	78	49.845	ENSCSAG00000003914	DDX42	63	49.610	Chlorocebus_sabaeus
WBGene00008119	C46F11.4	69	57.570	ENSCPBG00000026682	DDX42	63	52.830	Chrysemys_picta_bellii
WBGene00008119	C46F11.4	78	52.895	ENSCANG00000034663	DDX42	84	52.532	Colobus_angolensis_palliatus
WBGene00008119	C46F11.4	78	53.052	ENSCGRG00001009775	Ddx42	64	52.830	Cricetulus_griseus_chok1gshd
WBGene00008119	C46F11.4	78	53.052	ENSCGRG00000011718	Ddx42	64	52.830	Cricetulus_griseus_crigri
WBGene00008119	C46F11.4	70	56.424	ENSCSEG00000021574	ddx42	66	52.747	Cynoglossus_semilaevis
WBGene00008119	C46F11.4	78	53.991	ENSCVAG00000011404	ddx42	68	52.221	Cyprinodon_variegatus
WBGene00008119	C46F11.4	79	53.023	ENSDARG00000037928	ddx42	66	53.218	Danio_rerio
WBGene00008119	C46F11.4	80	52.656	ENSDNOG00000007961	DDX42	66	52.550	Dasypus_novemcinctus
WBGene00008119	C46F11.4	77	48.899	ENSDORG00000004199	Ddx42	67	48.980	Dipodomys_ordii
WBGene00008119	C46F11.4	80	53.130	FBgn0036104	CG6418	93	48.096	Drosophila_melanogaster
WBGene00008119	C46F11.4	87	47.340	ENSEBUG00000001155	ddx42	84	47.310	Eptatretus_burgeri
WBGene00008119	C46F11.4	78	52.895	ENSEASG00005013089	DDX42	83	52.623	Equus_asinus_asinus
WBGene00008119	C46F11.4	78	52.895	ENSECAG00000022684	DDX42	64	52.673	Equus_caballus
WBGene00008119	C46F11.4	56	55.870	ENSEEUG00000009144	DDX42	59	56.885	Erinaceus_europaeus
WBGene00008119	C46F11.4	87	48.686	ENSELUG00000020593	ddx42	64	52.590	Esox_lucius
WBGene00008119	C46F11.4	78	52.895	ENSFCAG00000003499	DDX42	70	53.679	Felis_catus
WBGene00008119	C46F11.4	78	53.052	ENSFALG00000004675	DDX42	53	52.987	Ficedula_albicollis
WBGene00008119	C46F11.4	78	52.895	ENSFDAG00000020516	DDX42	64	52.673	Fukomys_damarensis
WBGene00008119	C46F11.4	78	54.617	ENSFHEG00000023290	ddx42	68	53.528	Fundulus_heteroclitus
WBGene00008119	C46F11.4	75	48.553	ENSGMOG00000004595	ddx42	60	51.892	Gadus_morhua
WBGene00008119	C46F11.4	78	53.208	ENSGALG00000000581	DDX42	63	53.145	Gallus_gallus
WBGene00008119	C46F11.4	68	58.497	ENSGAFG00000011846	ddx42	68	53.139	Gambusia_affinis
WBGene00008119	C46F11.4	78	49.767	ENSGACG00000009782	ddx42	65	51.618	Gasterosteus_aculeatus
WBGene00008119	C46F11.4	79	52.778	ENSGAGG00000024411	DDX42	62	53.145	Gopherus_agassizii
WBGene00008119	C46F11.4	78	52.895	ENSGGOG00000006779	DDX42	82	52.623	Gorilla_gorilla
WBGene00008119	C46F11.4	69	58.156	ENSHBUG00000008705	ddx42	66	53.931	Haplochromis_burtoni
WBGene00008119	C46F11.4	71	52.881	ENSHGLG00000010024	DDX42	64	52.579	Heterocephalus_glaber_female
WBGene00008119	C46F11.4	78	52.895	ENSHGLG00100004479	-	64	52.830	Heterocephalus_glaber_male
WBGene00008119	C46F11.4	92	37.666	ENSHGLG00100007138	-	75	36.919	Heterocephalus_glaber_male
WBGene00008119	C46F11.4	69	54.401	ENSHCOG00000003357	ddx42	75	58.641	Hippocampus_comes
WBGene00008119	C46F11.4	80	52.824	ENSIPUG00000013327	ddx42	68	52.680	Ictalurus_punctatus
WBGene00008119	C46F11.4	78	52.895	ENSSTOG00000008922	DDX42	64	52.673	Ictidomys_tridecemlineatus
WBGene00008119	C46F11.4	78	52.895	ENSJJAG00000011727	Ddx42	65	52.673	Jaculus_jaculus
WBGene00008119	C46F11.4	79	53.560	ENSKMAG00000009914	ddx42	66	53.375	Kryptolebias_marmoratus
WBGene00008119	C46F11.4	69	55.250	ENSLBEG00000004687	ddx42	64	55.070	Labrus_bergylta
WBGene00008119	C46F11.4	85	49.369	ENSLACG00000013476	DDX42	73	48.607	Latimeria_chalumnae
WBGene00008119	C46F11.4	79	53.178	ENSLOCG00000011764	ddx42	65	52.830	Lepisosteus_oculatus
WBGene00008119	C46F11.4	78	52.895	ENSLAFG00000003249	DDX42	64	52.673	Loxodonta_africana
WBGene00008119	C46F11.4	78	52.895	ENSMFAG00000031356	DDX42	78	52.441	Macaca_fascicularis
WBGene00008119	C46F11.4	78	52.895	ENSMMUG00000016762	DDX42	82	52.441	Macaca_mulatta
WBGene00008119	C46F11.4	78	52.895	ENSMNEG00000038250	DDX42	78	52.623	Macaca_nemestrina
WBGene00008119	C46F11.4	78	52.895	ENSMLEG00000043080	DDX42	78	50.234	Mandrillus_leucophaeus
WBGene00008119	C46F11.4	86	49.591	ENSMAMG00000021888	ddx42	64	53.302	Mastacembelus_armatus
WBGene00008119	C46F11.4	69	58.230	ENSMZEG00005023103	ddx42	66	53.931	Maylandia_zebra
WBGene00008119	C46F11.4	78	53.208	ENSMGAG00000001822	DDX42	63	53.145	Meleagris_gallopavo
WBGene00008119	C46F11.4	77	52.941	ENSMAUG00000020774	-	79	52.782	Mesocricetus_auratus
WBGene00008119	C46F11.4	78	52.895	ENSMICG00000009952	DDX42	64	52.673	Microcebus_murinus
WBGene00008119	C46F11.4	78	53.052	ENSMOCG00000015504	Ddx42	64	52.830	Microtus_ochrogaster
WBGene00008119	C46F11.4	76	49.544	ENSMMOG00000016963	ddx42	59	52.254	Mola_mola
WBGene00008119	C46F11.4	81	52.545	ENSMALG00000007800	ddx42	67	52.859	Monopterus_albus
WBGene00008119	C46F11.4	78	53.052	MGP_CAROLIEiJ_G0017314	Ddx42	64	52.830	Mus_caroli
WBGene00008119	C46F11.4	78	53.052	ENSMUSG00000020705	Ddx42	64	52.830	Mus_musculus
WBGene00008119	C46F11.4	68	57.447	MGP_PahariEiJ_G0018444	-	77	57.838	Mus_pahari
WBGene00008119	C46F11.4	78	53.052	MGP_SPRETEiJ_G0018158	Ddx42	64	52.830	Mus_spretus
WBGene00008119	C46F11.4	78	52.895	ENSMPUG00000014921	DDX42	63	52.673	Mustela_putorius_furo
WBGene00008119	C46F11.4	78	53.208	ENSMLUG00000011645	DDX42	63	52.987	Myotis_lucifugus
WBGene00008119	C46F11.4	78	53.052	ENSNGAG00000021897	Ddx42	64	52.830	Nannospalax_galili
WBGene00008119	C46F11.4	69	56.460	ENSNBRG00000004466	ddx42	65	52.358	Neolamprologus_brichardi
WBGene00008119	C46F11.4	78	52.895	ENSNLEG00000004248	DDX42	84	52.623	Nomascus_leucogenys
WBGene00008119	C46F11.4	76	42.973	ENSMEUG00000013227	-	71	42.673	Notamacropus_eugenii
WBGene00008119	C46F11.4	78	53.052	ENSOPRG00000014960	DDX42	63	52.830	Ochotona_princeps
WBGene00008119	C46F11.4	78	49.765	ENSODEG00000007810	DDX42	63	49.528	Octodon_degus
WBGene00008119	C46F11.4	69	58.407	ENSONIG00000000734	ddx42	66	53.931	Oreochromis_niloticus
WBGene00008119	C46F11.4	66	55.307	ENSOANG00000000265	DDX42	98	54.935	Ornithorhynchus_anatinus
WBGene00008119	C46F11.4	78	53.052	ENSOCUG00000004304	DDX42	58	52.830	Oryctolagus_cuniculus
WBGene00008119	C46F11.4	79	50.822	ENSORLG00000002395	ddx42	65	52.987	Oryzias_latipes
WBGene00008119	C46F11.4	80	50.989	ENSORLG00020011621	ddx42	66	52.830	Oryzias_latipes_hni
WBGene00008119	C46F11.4	87	47.645	ENSORLG00015004487	ddx42	66	52.987	Oryzias_latipes_hsok
WBGene00008119	C46F11.4	79	53.655	ENSOMEG00000020093	ddx42	66	54.003	Oryzias_melastigma
WBGene00008119	C46F11.4	78	52.895	ENSOGAG00000006872	DDX42	63	52.673	Otolemur_garnettii
WBGene00008119	C46F11.4	78	53.052	ENSOARG00000013540	DDX42	63	52.830	Ovis_aries
WBGene00008119	C46F11.4	78	52.895	ENSPPAG00000007496	DDX42	82	53.420	Pan_paniscus
WBGene00008119	C46F11.4	78	52.895	ENSPPRG00000002740	DDX42	64	52.673	Panthera_pardus
WBGene00008119	C46F11.4	78	52.895	ENSPTIG00000009932	DDX42	64	52.673	Panthera_tigris_altaica
WBGene00008119	C46F11.4	78	52.895	ENSPTRG00000009523	DDX42	82	53.420	Pan_troglodytes
WBGene00008119	C46F11.4	78	52.895	ENSPANG00000020990	DDX42	77	52.532	Papio_anubis
WBGene00008119	C46F11.4	79	54.321	ENSPKIG00000002901	ddx42	69	53.302	Paramormyrops_kingsleyae
WBGene00008119	C46F11.4	79	53.005	ENSPSIG00000010289	DDX42	72	52.673	Pelodiscus_sinensis
WBGene00008119	C46F11.4	73	53.411	ENSPMGG00000009323	ddx42	59	59.295	Periophthalmus_magnuspinnatus
WBGene00008119	C46F11.4	78	53.052	ENSPEMG00000006755	Ddx42	70	51.263	Peromyscus_maniculatus_bairdii
WBGene00008119	C46F11.4	85	48.069	ENSPMAG00000005580	ddx42	78	50.472	Petromyzon_marinus
WBGene00008119	C46F11.4	78	52.665	ENSPCIG00000009093	DDX42	63	52.441	Phascolarctos_cinereus
WBGene00008119	C46F11.4	78	53.991	ENSPFOG00000014104	ddx42	64	53.145	Poecilia_formosa
WBGene00008119	C46F11.4	78	54.147	ENSPLAG00000010522	ddx42	64	53.689	Poecilia_latipinna
WBGene00008119	C46F11.4	78	53.991	ENSPMEG00000010744	ddx42	65	52.301	Poecilia_mexicana
WBGene00008119	C46F11.4	78	53.834	ENSPREG00000009926	ddx42	65	52.527	Poecilia_reticulata
WBGene00008119	C46F11.4	78	51.330	ENSPPYG00000008531	DDX42	63	51.101	Pongo_abelii
WBGene00008119	C46F11.4	78	48.044	ENSPCAG00000002474	DDX42	69	47.956	Procavia_capensis
WBGene00008119	C46F11.4	74	48.033	ENSPCOG00000001559	DDX42	82	48.033	Propithecus_coquereli
WBGene00008119	C46F11.4	78	52.895	ENSPVAG00000000160	DDX42	64	52.673	Pteropus_vampyrus
WBGene00008119	C46F11.4	62	56.140	ENSPNYG00000013954	ddx42	71	52.676	Pundamilia_nyererei
WBGene00008119	C46F11.4	81	52.496	ENSPNAG00000017352	ddx42	73	52.129	Pygocentrus_nattereri
WBGene00008119	C46F11.4	78	53.208	ENSRNOG00000009474	Ddx42	64	52.987	Rattus_norvegicus
WBGene00008119	C46F11.4	78	52.895	ENSRBIG00000004781	DDX42	84	52.532	Rhinopithecus_bieti
WBGene00008119	C46F11.4	78	52.895	ENSRROG00000029794	DDX42	72	52.532	Rhinopithecus_roxellana
WBGene00008119	C46F11.4	78	52.895	ENSSBOG00000029624	DDX42	82	52.623	Saimiri_boliviensis_boliviensis
WBGene00008119	C46F11.4	78	52.665	ENSSHAG00000012896	-	63	52.441	Sarcophilus_harrisii
WBGene00008119	C46F11.4	85	50.356	ENSSFOG00015014064	ddx42	60	57.840	Scleropages_formosus
WBGene00008119	C46F11.4	80	52.511	ENSSMAG00000009077	ddx42	81	52.350	Scophthalmus_maximus
WBGene00008119	C46F11.4	79	53.178	ENSSDUG00000022221	ddx42	66	53.605	Seriola_dumerili
WBGene00008119	C46F11.4	79	52.167	ENSSLDG00000018483	ddx42	66	52.119	Seriola_lalandi_dorsalis
WBGene00008119	C46F11.4	78	52.895	ENSSARG00000009847	DDX42	64	52.673	Sorex_araneus
WBGene00008119	C46F11.4	79	52.859	ENSSPUG00000018806	DDX42	64	52.673	Sphenodon_punctatus
WBGene00008119	C46F11.4	70	57.192	ENSSPAG00000013055	ddx42	66	53.375	Stegastes_partitus
WBGene00008119	C46F11.4	75	53.583	ENSSSCG00000017289	DDX42	70	53.583	Sus_scrofa
WBGene00008119	C46F11.4	78	52.895	ENSTGUG00000001931	DDX42	64	52.830	Taeniopygia_guttata
WBGene00008119	C46F11.4	86	48.974	ENSTRUG00000010711	ddx42	74	56.012	Takifugu_rubripes
WBGene00008119	C46F11.4	65	58.790	ENSTBEG00000010159	DDX42	68	58.555	Tupaia_belangeri
WBGene00008119	C46F11.4	78	52.895	ENSTTRG00000006962	DDX42	64	52.673	Tursiops_truncatus
WBGene00008119	C46F11.4	80	52.914	ENSUAMG00000007321	DDX42	64	52.673	Ursus_americanus
WBGene00008119	C46F11.4	80	52.914	ENSUMAG00000017438	DDX42	64	52.673	Ursus_maritimus
WBGene00008119	C46F11.4	66	49.257	ENSVPAG00000009633	DDX42	54	49.071	Vicugna_pacos
WBGene00008119	C46F11.4	78	52.895	ENSVVUG00000006095	DDX42	64	52.673	Vulpes_vulpes
WBGene00008119	C46F11.4	79	53.077	ENSXETG00000003245	ddx42	63	52.821	Xenopus_tropicalis
WBGene00008119	C46F11.4	73	53.769	ENSXCOG00000017560	ddx42	75	53.496	Xiphophorus_couchianus
WBGene00008119	C46F11.4	80	53.272	ENSXMAG00000008138	ddx42	68	52.680	Xiphophorus_maculatus