EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00008133 (Gene tree)
Gene ID: -
Gene Symbol: efsc-1
Alias: selb-1
Full Name: Eukaryotic Elongation Factor%2C SelenoCysteine-tRNA-specific
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 3614 bases
Position: chrI:12978839-12982452
Accession: O62109
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
C47B2	GTP_EFTU	PF00009.27	5.7e-28	1	1
C47B2	GTP_EFTU	PF00009.27	4.8e-13	1	1
C47B2	MMR_HSR1	PF01926.23	9.7e-08	1	1
C47B2	MMR_HSR1	PF01926.23	1.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
C47B2.7b	-	1534	NM_060874	C47B2.7b	500 (aa)	NP_493275	O62108
C47B2.7a	-	1409	NM_060875	C47B2.7a	459 (aa)	NP_493276	O62109

Gene Model

Click here to download WBGene00008133's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00008133's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00008133	efsc-1	90	31.227	ENSG00000132394	EEFSEC	88	31.227	Homo_sapiens
WBGene00008133	efsc-1	92	33.077	ENSAPOG00000015931	eefsec	88	33.077	Acanthochromis_polyacanthus
WBGene00008133	efsc-1	55	43.137	ENSACIG00000022407	eefsec	87	38.956	Amphilophus_citrinellus
WBGene00008133	efsc-1	92	33.077	ENSAOCG00000008603	eefsec	88	33.077	Amphiprion_ocellaris
WBGene00008133	efsc-1	92	32.634	ENSAPEG00000017090	eefsec	88	32.634	Amphiprion_percula
WBGene00008133	efsc-1	94	32.588	ENSATEG00000002753	eefsec	93	33.269	Anabas_testudineus
WBGene00008133	efsc-1	61	30.031	ENSAPLG00000006745	EEFSEC	74	30.031	Anas_platyrhynchos
WBGene00008133	efsc-1	90	31.413	ENSANAG00000032691	EEFSEC	88	31.413	Aotus_nancymaae
WBGene00008133	efsc-1	94	31.978	ENSACLG00000024565	eefsec	79	43.137	Astatotilapia_calliptera
WBGene00008133	efsc-1	92	32.630	ENSAMXG00000002260	eefsec	87	33.012	Astyanax_mexicanus
WBGene00008133	efsc-1	90	32.210	ENSBTAG00000030962	EEFSEC	88	32.210	Bos_taurus
WBGene00008133	efsc-1	90	31.963	ENSCJAG00000005387	EEFSEC	88	31.963	Callithrix_jacchus
WBGene00008133	efsc-1	90	31.354	ENSCAFG00000004135	EEFSEC	71	31.608	Canis_familiaris
WBGene00008133	efsc-1	90	31.354	ENSCAFG00020004811	EEFSEC	88	31.354	Canis_lupus_dingo
WBGene00008133	efsc-1	90	33.137	ENSCHIG00000021838	EEFSEC	87	32.941	Capra_hircus
WBGene00008133	efsc-1	90	31.227	ENSTSYG00000012922	EEFSEC	88	31.227	Carlito_syrichta
WBGene00008133	efsc-1	75	30.070	ENSCAPG00000000084	EEFSEC	84	30.070	Cavia_aperea
WBGene00008133	efsc-1	90	33.075	ENSCPOG00000024352	EEFSEC	91	39.431	Cavia_porcellus
WBGene00008133	efsc-1	90	31.413	ENSCCAG00000031336	EEFSEC	88	31.413	Cebus_capucinus
WBGene00008133	efsc-1	90	31.402	ENSCATG00000019414	EEFSEC	88	31.402	Cercocebus_atys
WBGene00008133	efsc-1	90	32.755	ENSCLAG00000006973	EEFSEC	90	38.776	Chinchilla_lanigera
WBGene00008133	efsc-1	90	31.589	ENSCSAG00000008599	EEFSEC	88	31.589	Chlorocebus_sabaeus
WBGene00008133	efsc-1	90	32.500	ENSCPBG00000014356	EEFSEC	85	32.885	Chrysemys_picta_bellii
WBGene00008133	efsc-1	90	31.518	ENSCSAVG00000002208	-	96	32.979	Ciona_savignyi
WBGene00008133	efsc-1	94	30.866	ENSCANG00000031492	EEFSEC	90	30.866	Colobus_angolensis_palliatus
WBGene00008133	efsc-1	90	32.375	ENSCGRG00001018089	Eefsec	87	32.375	Cricetulus_griseus_chok1gshd
WBGene00008133	efsc-1	91	32.061	ENSCGRG00000010063	Eefsec	91	37.903	Cricetulus_griseus_crigri
WBGene00008133	efsc-1	93	32.458	ENSCSEG00000003008	eefsec	85	42.857	Cynoglossus_semilaevis
WBGene00008133	efsc-1	94	33.081	ENSCVAG00000005381	eefsec	88	33.527	Cyprinodon_variegatus
WBGene00008133	efsc-1	94	32.897	ENSDARG00000004696	eefsec	88	32.950	Danio_rerio
WBGene00008133	efsc-1	90	32.068	ENSDNOG00000008925	EEFSEC	88	32.068	Dasypus_novemcinctus
WBGene00008133	efsc-1	91	30.444	FBgn0034627	eEFSec	93	30.550	Drosophila_melanogaster
WBGene00008133	efsc-1	70	32.461	ENSETEG00000007406	EEFSEC	62	32.461	Echinops_telfairi
WBGene00008133	efsc-1	90	32.210	ENSEASG00005006786	EEFSEC	88	32.210	Equus_asinus_asinus
WBGene00008133	efsc-1	90	32.210	ENSECAG00000016565	EEFSEC	88	32.210	Equus_caballus
WBGene00008133	efsc-1	94	32.510	ENSELUG00000016632	eefsec	90	32.519	Esox_lucius
WBGene00008133	efsc-1	90	31.471	ENSFCAG00000006153	EEFSEC	88	31.844	Felis_catus
WBGene00008133	efsc-1	61	30.650	ENSFALG00000007901	EEFSEC	65	30.650	Ficedula_albicollis
WBGene00008133	efsc-1	75	30.345	ENSFDAG00000010243	EEFSEC	81	46.809	Fukomys_damarensis
WBGene00008133	efsc-1	94	33.068	ENSFHEG00000007155	eefsec	88	32.885	Fundulus_heteroclitus
WBGene00008133	efsc-1	92	30.754	ENSGMOG00000007705	eefsec	88	31.589	Gadus_morhua
WBGene00008133	efsc-1	90	32.364	ENSGALG00000038684	EEFSEC	91	32.364	Gallus_gallus
WBGene00008133	efsc-1	94	32.703	ENSGAFG00000021692	eefsec	88	32.946	Gambusia_affinis
WBGene00008133	efsc-1	94	32.900	ENSGACG00000000793	eefsec	92	33.083	Gasterosteus_aculeatus
WBGene00008133	efsc-1	90	32.885	ENSGAGG00000002059	EEFSEC	89	33.269	Gopherus_agassizii
WBGene00008133	efsc-1	79	30.769	ENSGGOG00000001445	EEFSEC	85	30.769	Gorilla_gorilla
WBGene00008133	efsc-1	94	32.163	ENSHBUG00000008917	eefsec	95	32.689	Haplochromis_burtoni
WBGene00008133	efsc-1	90	32.505	ENSHGLG00000000094	EEFSEC	74	46.809	Heterocephalus_glaber_female
WBGene00008133	efsc-1	90	32.505	ENSHGLG00100011393	EEFSEC	84	32.505	Heterocephalus_glaber_male
WBGene00008133	efsc-1	93	31.947	ENSHCOG00000004193	eefsec	88	31.870	Hippocampus_comes
WBGene00008133	efsc-1	92	32.308	ENSIPUG00000017291	eefsec	96	32.554	Ictalurus_punctatus
WBGene00008133	efsc-1	75	31.075	ENSSTOG00000019802	EEFSEC	81	46.809	Ictidomys_tridecemlineatus
WBGene00008133	efsc-1	92	32.752	ENSKMAG00000019907	eefsec	94	32.816	Kryptolebias_marmoratus
WBGene00008133	efsc-1	93	33.081	ENSLBEG00000017908	eefsec	89	33.081	Labrus_bergylta
WBGene00008133	efsc-1	79	32.802	ENSLACG00000013137	EEFSEC	87	32.450	Latimeria_chalumnae
WBGene00008133	efsc-1	94	32.015	ENSLOCG00000014535	eefsec	87	33.333	Lepisosteus_oculatus
WBGene00008133	efsc-1	90	30.784	ENSLAFG00000001997	EEFSEC	87	31.538	Loxodonta_africana
WBGene00008133	efsc-1	90	31.402	ENSMFAG00000042128	EEFSEC	88	31.402	Macaca_fascicularis
WBGene00008133	efsc-1	73	30.353	ENSMMUG00000018663	EEFSEC	86	30.353	Macaca_mulatta
WBGene00008133	efsc-1	90	31.402	ENSMNEG00000028574	EEFSEC	88	31.402	Macaca_nemestrina
WBGene00008133	efsc-1	91	33.461	ENSMAMG00000023964	eefsec	85	40.161	Mastacembelus_armatus
WBGene00008133	efsc-1	58	43.137	ENSMZEG00005009380	eefsec	79	43.137	Maylandia_zebra
WBGene00008133	efsc-1	92	32.022	ENSMAUG00000011197	Eefsec	97	32.022	Mesocricetus_auratus
WBGene00008133	efsc-1	90	32.000	ENSMOCG00000017748	Eefsec	90	38.211	Microtus_ochrogaster
WBGene00008133	efsc-1	54	44.681	ENSMMOG00000021820	eefsec	80	44.681	Mola_mola
WBGene00008133	efsc-1	90	31.955	ENSMODG00000008034	EEFSEC	79	31.955	Monodelphis_domestica
WBGene00008133	efsc-1	92	33.716	ENSMALG00000016211	eefsec	97	33.915	Monopterus_albus
WBGene00008133	efsc-1	92	32.649	MGP_CAROLIEiJ_G0028627	Eefsec	99	33.984	Mus_caroli
WBGene00008133	efsc-1	92	32.649	ENSMUSG00000033216	Eefsec	99	33.984	Mus_musculus
WBGene00008133	efsc-1	92	32.649	MGP_PahariEiJ_G0022366	Eefsec	99	33.984	Mus_pahari
WBGene00008133	efsc-1	92	32.397	MGP_SPRETEiJ_G0029640	Eefsec	99	33.984	Mus_spretus
WBGene00008133	efsc-1	90	31.402	ENSMPUG00000017340	EEFSEC	84	31.402	Mustela_putorius_furo
WBGene00008133	efsc-1	76	30.594	ENSMLUG00000004261	EEFSEC	87	30.594	Myotis_lucifugus
WBGene00008133	efsc-1	94	32.163	ENSNBRG00000002387	eefsec	79	43.137	Neolamprologus_brichardi
WBGene00008133	efsc-1	90	31.227	ENSNLEG00000014303	EEFSEC	88	31.227	Nomascus_leucogenys
WBGene00008133	efsc-1	76	30.046	ENSMEUG00000005747	EEFSEC	88	30.046	Notamacropus_eugenii
WBGene00008133	efsc-1	90	31.273	ENSOPRG00000011276	EEFSEC	88	31.273	Ochotona_princeps
WBGene00008133	efsc-1	90	32.563	ENSODEG00000002928	EEFSEC	90	39.184	Octodon_degus
WBGene00008133	efsc-1	74	31.221	ENSONIG00000019038	eefsec	87	31.043	Oreochromis_niloticus
WBGene00008133	efsc-1	73	30.496	ENSOANG00000009108	EEFSEC	86	30.496	Ornithorhynchus_anatinus
WBGene00008133	efsc-1	90	31.132	ENSOCUG00000016517	EEFSEC	88	31.132	Oryctolagus_cuniculus
WBGene00008133	efsc-1	92	32.882	ENSORLG00000001377	eefsec	81	40.741	Oryzias_latipes
WBGene00008133	efsc-1	92	32.882	ENSORLG00020000729	eefsec	81	42.593	Oryzias_latipes_hni
WBGene00008133	efsc-1	92	32.882	ENSORLG00015001986	eefsec	88	32.882	Oryzias_latipes_hsok
WBGene00008133	efsc-1	76	30.536	ENSOMEG00000010071	eefsec	78	30.679	Oryzias_melastigma
WBGene00008133	efsc-1	55	32.867	ENSOARG00000004600	EEFSEC	74	32.867	Ovis_aries
WBGene00008133	efsc-1	90	31.227	ENSPPAG00000030936	EEFSEC	88	31.227	Pan_paniscus
WBGene00008133	efsc-1	90	31.963	ENSPPRG00000002846	EEFSEC	88	31.963	Panthera_pardus
WBGene00008133	efsc-1	75	30.947	ENSPTIG00000013855	EEFSEC	77	30.947	Panthera_tigris_altaica
WBGene00008133	efsc-1	90	31.227	ENSPTRG00000015353	EEFSEC	88	31.227	Pan_troglodytes
WBGene00008133	efsc-1	90	31.776	ENSPANG00000017041	EEFSEC	88	31.776	Papio_anubis
WBGene00008133	efsc-1	91	33.270	ENSPKIG00000005220	eefsec	78	44.681	Paramormyrops_kingsleyae
WBGene00008133	efsc-1	90	33.077	ENSPSIG00000015135	EEFSEC	96	33.077	Pelodiscus_sinensis
WBGene00008133	efsc-1	94	32.270	ENSPMGG00000020300	eefsec	90	32.270	Periophthalmus_magnuspinnatus
WBGene00008133	efsc-1	90	32.375	ENSPEMG00000013677	Eefsec	90	38.618	Peromyscus_maniculatus_bairdii
WBGene00008133	efsc-1	90	31.731	ENSPMAG00000006779	eefsec	96	31.286	Petromyzon_marinus
WBGene00008133	efsc-1	75	30.536	ENSPCIG00000020494	EEFSEC	87	30.536	Phascolarctos_cinereus
WBGene00008133	efsc-1	94	32.136	ENSPFOG00000003748	eefsec	88	32.364	Poecilia_formosa
WBGene00008133	efsc-1	93	32.190	ENSPLAG00000018012	eefsec	93	32.485	Poecilia_latipinna
WBGene00008133	efsc-1	94	32.136	ENSPMEG00000001202	eefsec	88	32.364	Poecilia_mexicana
WBGene00008133	efsc-1	94	32.392	ENSPREG00000012235	eefsec	88	33.077	Poecilia_reticulata
WBGene00008133	efsc-1	90	30.855	ENSPPYG00000013436	EEFSEC	88	30.855	Pongo_abelii
WBGene00008133	efsc-1	66	37.755	ENSPCAG00000005883	EEFSEC	68	38.144	Procavia_capensis
WBGene00008133	efsc-1	90	32.703	ENSPCOG00000023432	EEFSEC	88	32.703	Propithecus_coquereli
WBGene00008133	efsc-1	64	38.710	ENSPVAG00000007070	EEFSEC	57	38.043	Pteropus_vampyrus
WBGene00008133	efsc-1	94	31.978	ENSPNYG00000005726	eefsec	79	43.137	Pundamilia_nyererei
WBGene00008133	efsc-1	92	32.952	ENSPNAG00000016724	eefsec	89	32.952	Pygocentrus_nattereri
WBGene00008133	efsc-1	90	32.190	ENSRNOG00000012954	Eefsec	79	44.681	Rattus_norvegicus
WBGene00008133	efsc-1	90	31.402	ENSRBIG00000032635	EEFSEC	88	31.402	Rhinopithecus_bieti
WBGene00008133	efsc-1	73	30.607	ENSSBOG00000031478	EEFSEC	86	30.607	Saimiri_boliviensis_boliviensis
WBGene00008133	efsc-1	73	31.132	ENSSHAG00000014760	EEFSEC	86	31.132	Sarcophilus_harrisii
WBGene00008133	efsc-1	92	35.223	ENSSFOG00015021109	eefsec	87	35.223	Scleropages_formosus
WBGene00008133	efsc-1	96	31.927	ENSSMAG00000001454	eefsec	93	32.689	Scophthalmus_maximus
WBGene00008133	efsc-1	92	33.080	ENSSDUG00000007924	eefsec	81	43.137	Seriola_dumerili
WBGene00008133	efsc-1	92	33.716	ENSSLDG00000024985	eefsec	90	33.716	Seriola_lalandi_dorsalis
WBGene00008133	efsc-1	61	48.936	ENSSARG00000003789	-	54	48.936	Sorex_araneus
WBGene00008133	efsc-1	63	30.488	ENSSPUG00000004191	EEFSEC	88	30.233	Sphenodon_punctatus
WBGene00008133	efsc-1	92	32.000	ENSSPAG00000001320	eefsec	81	45.098	Stegastes_partitus
WBGene00008133	efsc-1	91	31.169	ENSSSCG00000011619	EEFSEC	96	31.461	Sus_scrofa
WBGene00008133	efsc-1	90	33.268	ENSTGUG00000007895	EEFSEC	88	33.268	Taeniopygia_guttata
WBGene00008133	efsc-1	92	33.527	ENSTRUG00000010327	eefsec	92	33.792	Takifugu_rubripes
WBGene00008133	efsc-1	92	33.588	ENSTNIG00000003225	eefsec	89	33.588	Tetraodon_nigroviridis
WBGene00008133	efsc-1	90	32.642	ENSTTRG00000000994	EEFSEC	89	32.642	Tursiops_truncatus
WBGene00008133	efsc-1	90	31.227	ENSUAMG00000017283	EEFSEC	88	31.227	Ursus_americanus
WBGene00008133	efsc-1	75	30.485	ENSVVUG00000018372	EEFSEC	89	30.485	Vulpes_vulpes
WBGene00008133	efsc-1	70	35.040	ENSXETG00000002066	eefsec	77	35.040	Xenopus_tropicalis
WBGene00008133	efsc-1	94	32.325	ENSXCOG00000019916	eefsec	88	32.558	Xiphophorus_couchianus
WBGene00008133	efsc-1	94	32.514	ENSXMAG00000001839	eefsec	93	32.877	Xiphophorus_maculatus