EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00008205 (Gene tree)
Gene ID: -
Gene Symbol: sams-1
Alias: -
Full Name: Probable S-adenosylmethionine synthase 1
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 3823
Position: chrX: 11965962-11969784
Accession: O17680
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
C49F5.1.1	-	1827	-	C49F5.1.1	403 (aa)	-	O17680
C49F5.1.3	-	1421	NM_077601	C49F5.1.3	403 (aa)	NP_510002	O17680
C49F5.1.2	-	2008	-	C49F5.1.2	403 (aa)	-	O17680

Gene Model

Click here to download WBGene00008205's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00008205's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00008205	sams-1	93	69.947	ENSMUSG00000037798	Mat1a	90	75.595	Mus_musculus
WBGene00008205	sams-1	94	67.905	ENSMUSG00000053907	Mat2a	95	68.116	Mus_musculus
WBGene00008205	sams-1	95	63.089	YLR180W	SAM1	100	63.089	Saccharomyces_cerevisiae
WBGene00008205	sams-1	95	61.680	YDR502C	SAM2	99	61.680	Saccharomyces_cerevisiae