EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00008380 (Gene tree)
Gene ID: -
Gene Symbol: prp-38
Alias: -
Full Name: Yeast PRP (Splicing factor) related
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 1314 bases
Position: chrV:10804721-10806034
Accession: Q18942
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
D1054	PRP38	PF03371.15	1.5e-60	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
D1054.14	-	1084	NM_073361	D1054.14	320 (aa)	NP_505762	Q18942

Gene Model

Click here to download WBGene00008380's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00008380's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00008380	prp-38	67	61.574	ENSG00000134748	PRPF38A	63	62.564	Homo_sapiens
WBGene00008380	prp-38	59	65.957	ENSAPOG00000011652	prpf38a	63	64.103	Acanthochromis_polyacanthus
WBGene00008380	prp-38	67	61.574	ENSAMEG00000009319	PRPF38A	63	62.564	Ailuropoda_melanoleuca
WBGene00008380	prp-38	59	64.894	ENSACIG00000012292	prpf38a	64	63.077	Amphilophus_citrinellus
WBGene00008380	prp-38	59	65.957	ENSAOCG00000018004	prpf38a	63	64.103	Amphiprion_ocellaris
WBGene00008380	prp-38	59	65.957	ENSAPEG00000021414	prpf38a	63	64.103	Amphiprion_percula
WBGene00008380	prp-38	68	59.817	ENSATEG00000004608	prpf38a	63	62.564	Anabas_testudineus
WBGene00008380	prp-38	68	60.731	ENSACAG00000008249	PRPF38A	63	63.077	Anolis_carolinensis
WBGene00008380	prp-38	54	39.773	ENSANAG00000029204	-	54	39.773	Aotus_nancymaae
WBGene00008380	prp-38	67	61.574	ENSANAG00000027839	PRPF38A	63	62.564	Aotus_nancymaae
WBGene00008380	prp-38	59	64.894	ENSACLG00000021595	prpf38a	65	63.077	Astatotilapia_calliptera
WBGene00008380	prp-38	68	59.361	ENSAMXG00000029274	prpf38a	62	62.564	Astyanax_mexicanus
WBGene00008380	prp-38	67	61.574	ENSBTAG00000002720	PRPF38A	66	62.564	Bos_taurus
WBGene00008380	prp-38	67	61.574	ENSCJAG00000021594	PRPF38A	65	62.564	Callithrix_jacchus
WBGene00008380	prp-38	67	61.574	ENSCAFG00000003740	PRPF38A	63	62.564	Canis_familiaris
WBGene00008380	prp-38	67	61.574	ENSCAFG00020010939	PRPF38A	63	62.564	Canis_lupus_dingo
WBGene00008380	prp-38	67	61.574	ENSCHIG00000024730	PRPF38A	63	62.564	Capra_hircus
WBGene00008380	prp-38	54	57.803	ENSTSYG00000031994	-	54	58.553	Carlito_syrichta
WBGene00008380	prp-38	67	61.574	ENSTSYG00000009868	-	63	62.564	Carlito_syrichta
WBGene00008380	prp-38	67	61.574	ENSCPOG00000005079	PRPF38A	63	62.564	Cavia_porcellus
WBGene00008380	prp-38	67	61.574	ENSCCAG00000026502	PRPF38A	63	62.564	Cebus_capucinus
WBGene00008380	prp-38	53	39.881	ENSCATG00000044190	-	60	37.436	Cercocebus_atys
WBGene00008380	prp-38	67	61.574	ENSCATG00000032296	PRPF38A	63	62.564	Cercocebus_atys
WBGene00008380	prp-38	67	61.574	ENSCLAG00000005816	PRPF38A	63	62.564	Chinchilla_lanigera
WBGene00008380	prp-38	68	60.731	ENSCPBG00000014791	PRPF38A	63	63.077	Chrysemys_picta_bellii
WBGene00008380	prp-38	55	67.797	ENSCSAVG00000009580	-	64	64.948	Ciona_savignyi
WBGene00008380	prp-38	67	61.574	ENSCANG00000032608	PRPF38A	65	62.564	Colobus_angolensis_palliatus
WBGene00008380	prp-38	68	53.425	ENSCGRG00001002557	-	65	54.359	Cricetulus_griseus_chok1gshd
WBGene00008380	prp-38	67	61.574	ENSCGRG00001018502	-	63	62.564	Cricetulus_griseus_chok1gshd
WBGene00008380	prp-38	67	61.574	ENSCGRG00000014868	Prpf38a	63	62.564	Cricetulus_griseus_crigri
WBGene00008380	prp-38	67	60.648	ENSCSEG00000001269	prpf38a	67	62.564	Cynoglossus_semilaevis
WBGene00008380	prp-38	70	60.538	ENSCVAG00000012305	prpf38a	63	63.590	Cyprinodon_variegatus
WBGene00008380	prp-38	59	65.426	ENSDARG00000039213	prpf38a	62	63.590	Danio_rerio
WBGene00008380	prp-38	67	61.574	ENSDNOG00000042326	PRPF38A	64	62.564	Dasypus_novemcinctus
WBGene00008380	prp-38	67	50.463	ENSDORG00000023857	-	57	50.256	Dipodomys_ordii
WBGene00008380	prp-38	55	66.102	ENSDORG00000025371	-	69	62.564	Dipodomys_ordii
WBGene00008380	prp-38	55	66.102	ENSDORG00000023691	-	69	62.564	Dipodomys_ordii
WBGene00008380	prp-38	66	64.455	FBgn0050342	Prp38	57	69.149	Drosophila_melanogaster
WBGene00008380	prp-38	59	64.894	ENSEBUG00000012588	prpf38a	62	63.402	Eptatretus_burgeri
WBGene00008380	prp-38	67	61.574	ENSEASG00005014427	PRPF38A	63	62.564	Equus_asinus_asinus
WBGene00008380	prp-38	67	61.574	ENSECAG00000022628	PRPF38A	63	62.564	Equus_caballus
WBGene00008380	prp-38	59	65.426	ENSELUG00000021094	prpf38a	69	62.755	Esox_lucius
WBGene00008380	prp-38	67	61.574	ENSFCAG00000002518	PRPF38A	63	62.564	Felis_catus
WBGene00008380	prp-38	59	62.766	ENSFALG00000003612	-	65	61.026	Ficedula_albicollis
WBGene00008380	prp-38	67	61.574	ENSFDAG00000011287	PRPF38A	63	62.564	Fukomys_damarensis
WBGene00008380	prp-38	59	64.894	ENSFHEG00000014317	prpf38a	66	63.077	Fundulus_heteroclitus
WBGene00008380	prp-38	52	68.072	ENSGMOG00000011384	prpf38a	54	68.072	Gadus_morhua
WBGene00008380	prp-38	59	64.894	ENSGALG00000010627	PRPF38A	63	63.077	Gallus_gallus
WBGene00008380	prp-38	59	65.426	ENSGAFG00000012422	prpf38a	63	63.590	Gambusia_affinis
WBGene00008380	prp-38	70	60.538	ENSGACG00000005423	prpf38a	63	63.077	Gasterosteus_aculeatus
WBGene00008380	prp-38	59	64.894	ENSGAGG00000020547	PRPF38A	63	63.077	Gopherus_agassizii
WBGene00008380	prp-38	67	61.574	ENSGGOG00000003940	PRPF38A	63	62.564	Gorilla_gorilla
WBGene00008380	prp-38	59	64.894	ENSHBUG00000020572	prpf38a	83	63.077	Haplochromis_burtoni
WBGene00008380	prp-38	67	61.574	ENSHGLG00000000475	PRPF38A	63	62.564	Heterocephalus_glaber_female
WBGene00008380	prp-38	67	53.953	ENSHGLG00000007918	-	63	55.385	Heterocephalus_glaber_female
WBGene00008380	prp-38	67	61.574	ENSHGLG00100008935	PRPF38A	63	62.564	Heterocephalus_glaber_male
WBGene00008380	prp-38	67	53.953	ENSHGLG00100003928	-	63	55.385	Heterocephalus_glaber_male
WBGene00008380	prp-38	55	66.102	ENSHCOG00000020781	prpf38a	59	64.362	Hippocampus_comes
WBGene00008380	prp-38	59	65.957	ENSIPUG00000005757	prpf38a	67	64.103	Ictalurus_punctatus
WBGene00008380	prp-38	67	61.574	ENSSTOG00000015610	PRPF38A	63	62.564	Ictidomys_tridecemlineatus
WBGene00008380	prp-38	67	61.574	ENSJJAG00000015811	Prpf38a	63	62.564	Jaculus_jaculus
WBGene00008380	prp-38	67	62.037	ENSKMAG00000006588	prpf38a	63	64.103	Kryptolebias_marmoratus
WBGene00008380	prp-38	59	64.894	ENSLBEG00000020585	prpf38a	63	63.077	Labrus_bergylta
WBGene00008380	prp-38	69	58.559	ENSLACG00000011495	PRPF38A	63	62.051	Latimeria_chalumnae
WBGene00008380	prp-38	59	64.894	ENSLOCG00000006262	prpf38a	63	63.077	Lepisosteus_oculatus
WBGene00008380	prp-38	67	61.574	ENSLAFG00000025862	PRPF38A	63	62.564	Loxodonta_africana
WBGene00008380	prp-38	67	61.574	ENSMFAG00000039449	PRPF38A	65	62.564	Macaca_fascicularis
WBGene00008380	prp-38	55	58.523	ENSMMUG00000014333	PRPF38A	56	59.355	Macaca_mulatta
WBGene00008380	prp-38	53	40.476	ENSMNEG00000040242	-	60	37.949	Macaca_nemestrina
WBGene00008380	prp-38	67	61.574	ENSMNEG00000031221	PRPF38A	63	62.564	Macaca_nemestrina
WBGene00008380	prp-38	67	61.574	ENSMLEG00000041105	PRPF38A	63	62.564	Mandrillus_leucophaeus
WBGene00008380	prp-38	59	65.957	ENSMAMG00000015431	prpf38a	65	64.103	Mastacembelus_armatus
WBGene00008380	prp-38	59	64.894	ENSMZEG00005017838	prpf38a	63	63.077	Maylandia_zebra
WBGene00008380	prp-38	59	64.894	ENSMGAG00000011176	PRPF38A	65	63.077	Meleagris_gallopavo
WBGene00008380	prp-38	55	62.147	ENSMAUG00000018029	-	74	58.974	Mesocricetus_auratus
WBGene00008380	prp-38	67	61.574	ENSMICG00000014193	PRPF38A	63	62.564	Microcebus_murinus
WBGene00008380	prp-38	67	61.574	ENSMOCG00000013080	Prpf38a	63	62.564	Microtus_ochrogaster
WBGene00008380	prp-38	69	59.009	ENSMMOG00000016972	prpf38a	68	62.564	Mola_mola
WBGene00008380	prp-38	59	64.362	ENSMODG00000000644	PRPF38A	62	62.564	Monodelphis_domestica
WBGene00008380	prp-38	68	60.274	ENSMALG00000019363	prpf38a	61	63.590	Monopterus_albus
WBGene00008380	prp-38	67	60.185	MGP_CAROLIEiJ_G0026269	Prpf38a	63	61.026	Mus_caroli
WBGene00008380	prp-38	67	60.185	ENSMUSG00000063800	Prpf38a	63	61.026	Mus_musculus
WBGene00008380	prp-38	67	60.185	MGP_PahariEiJ_G0028602	Prpf38a	63	61.026	Mus_pahari
WBGene00008380	prp-38	67	60.185	MGP_SPRETEiJ_G0027238	Prpf38a	96	61.026	Mus_spretus
WBGene00008380	prp-38	67	61.574	ENSMPUG00000006896	PRPF38A	63	62.564	Mustela_putorius_furo
WBGene00008380	prp-38	67	61.574	ENSNGAG00000011884	Prpf38a	64	62.564	Nannospalax_galili
WBGene00008380	prp-38	68	58.904	ENSNBRG00000004013	prpf38a	63	62.051	Neolamprologus_brichardi
WBGene00008380	prp-38	60	60.622	ENSNLEG00000017999	PRPF38A	55	61.628	Nomascus_leucogenys
WBGene00008380	prp-38	59	36.702	ENSNLEG00000033398	-	51	35.897	Nomascus_leucogenys
WBGene00008380	prp-38	59	40.426	ENSNLEG00000012592	-	57	39.487	Nomascus_leucogenys
WBGene00008380	prp-38	59	64.362	ENSMEUG00000003860	PRPF38A	60	64.362	Notamacropus_eugenii
WBGene00008380	prp-38	67	61.574	ENSOPRG00000008985	PRPF38A	81	62.564	Ochotona_princeps
WBGene00008380	prp-38	67	61.574	ENSODEG00000005869	PRPF38A	63	62.564	Octodon_degus
WBGene00008380	prp-38	59	64.362	ENSONIG00000007816	prpf38a	63	62.564	Oreochromis_niloticus
WBGene00008380	prp-38	67	61.574	ENSOCUG00000000963	PRPF38A	63	62.564	Oryctolagus_cuniculus
WBGene00008380	prp-38	59	64.894	ENSORLG00000013485	prpf38a	69	63.077	Oryzias_latipes
WBGene00008380	prp-38	70	60.090	ENSORLG00020002130	prpf38a	69	63.077	Oryzias_latipes_hni
WBGene00008380	prp-38	69	58.559	ENSORLG00015021393	prpf38a	67	63.077	Oryzias_latipes_hsok
WBGene00008380	prp-38	59	64.362	ENSOMEG00000016333	prpf38a	63	62.564	Oryzias_melastigma
WBGene00008380	prp-38	67	61.574	ENSOGAG00000005423	PRPF38A	63	62.564	Otolemur_garnettii
WBGene00008380	prp-38	67	61.574	ENSOARG00000005373	PRPF38A	63	62.564	Ovis_aries
WBGene00008380	prp-38	67	61.574	ENSPPAG00000030905	PRPF38A	63	62.564	Pan_paniscus
WBGene00008380	prp-38	54	59.538	ENSPPAG00000033867	-	56	59.538	Pan_paniscus
WBGene00008380	prp-38	67	61.574	ENSPPRG00000013268	PRPF38A	63	62.564	Panthera_pardus
WBGene00008380	prp-38	67	61.574	ENSPTIG00000015419	PRPF38A	63	62.564	Panthera_tigris_altaica
WBGene00008380	prp-38	67	61.574	ENSPTRG00000000739	PRPF38A	65	62.564	Pan_troglodytes
WBGene00008380	prp-38	67	61.574	ENSPANG00000015483	PRPF38A	63	62.564	Papio_anubis
WBGene00008380	prp-38	59	65.426	ENSPKIG00000011439	prpf38a	63	63.590	Paramormyrops_kingsleyae
WBGene00008380	prp-38	59	64.894	ENSPSIG00000017487	PRPF38A	63	63.077	Pelodiscus_sinensis
WBGene00008380	prp-38	59	63.830	ENSPMGG00000021352	prpf38a	67	62.051	Periophthalmus_magnuspinnatus
WBGene00008380	prp-38	67	61.574	ENSPEMG00000023277	-	63	62.564	Peromyscus_maniculatus_bairdii
WBGene00008380	prp-38	59	61.170	ENSPEMG00000011212	-	61	59.487	Peromyscus_maniculatus_bairdii
WBGene00008380	prp-38	59	64.362	ENSPCIG00000022369	-	62	62.564	Phascolarctos_cinereus
WBGene00008380	prp-38	59	65.426	ENSPFOG00000004248	prpf38a	63	63.590	Poecilia_formosa
WBGene00008380	prp-38	85	50.896	ENSPLAG00000010328	prpf38a	63	63.590	Poecilia_latipinna
WBGene00008380	prp-38	85	50.896	ENSPMEG00000011804	prpf38a	63	63.590	Poecilia_mexicana
WBGene00008380	prp-38	59	65.426	ENSPREG00000002835	prpf38a	60	63.590	Poecilia_reticulata
WBGene00008380	prp-38	67	52.727	ENSPPYG00000001348	PRPF38A	63	52.764	Pongo_abelii
WBGene00008380	prp-38	67	62.037	ENSPCAG00000013328	PRPF38A	63	63.077	Procavia_capensis
WBGene00008380	prp-38	77	45.594	ENSPCOG00000020709	-	63	57.219	Propithecus_coquereli
WBGene00008380	prp-38	67	61.574	ENSPCOG00000016387	-	63	62.564	Propithecus_coquereli
WBGene00008380	prp-38	67	61.574	ENSPVAG00000009803	PRPF38A	63	62.564	Pteropus_vampyrus
WBGene00008380	prp-38	59	64.894	ENSPNYG00000005571	prpf38a	63	63.077	Pundamilia_nyererei
WBGene00008380	prp-38	68	60.274	ENSPNAG00000010399	prpf38a	62	63.590	Pygocentrus_nattereri
WBGene00008380	prp-38	67	61.111	ENSRNOG00000009451	Prpf38a	63	62.051	Rattus_norvegicus
WBGene00008380	prp-38	67	61.574	ENSRBIG00000036442	PRPF38A	65	62.564	Rhinopithecus_bieti
WBGene00008380	prp-38	67	61.574	ENSRROG00000032788	PRPF38A	63	62.564	Rhinopithecus_roxellana
WBGene00008380	prp-38	53	55.294	ENSRROG00000040003	-	56	55.294	Rhinopithecus_roxellana
WBGene00008380	prp-38	67	61.574	ENSSBOG00000019515	PRPF38A	63	62.564	Saimiri_boliviensis_boliviensis
WBGene00008380	prp-38	55	65.537	ENSSHAG00000006029	-	65	61.026	Sarcophilus_harrisii
WBGene00008380	prp-38	59	65.957	ENSSFOG00015013572	prpf38a	63	64.615	Scleropages_formosus
WBGene00008380	prp-38	68	60.731	ENSSMAG00000015379	prpf38a	63	64.103	Scophthalmus_maximus
WBGene00008380	prp-38	68	60.274	ENSSDUG00000001324	prpf38a	63	63.590	Seriola_dumerili
WBGene00008380	prp-38	68	60.274	ENSSLDG00000014803	prpf38a	63	63.590	Seriola_lalandi_dorsalis
WBGene00008380	prp-38	67	42.593	ENSSARG00000014458	PRPF38A	63	41.538	Sorex_araneus
WBGene00008380	prp-38	68	59.817	ENSSPUG00000013259	PRPF38A	63	62.564	Sphenodon_punctatus
WBGene00008380	prp-38	59	52.128	ENSSPAG00000010449	prpf38a	58	50.769	Stegastes_partitus
WBGene00008380	prp-38	67	61.574	ENSSSCG00000028288	PRPF38A	63	62.564	Sus_scrofa
WBGene00008380	prp-38	59	60.106	ENSTGUG00000008995	PRPF38A	63	58.462	Taeniopygia_guttata
WBGene00008380	prp-38	59	64.894	ENSTRUG00000003374	prpf38a	60	63.077	Takifugu_rubripes
WBGene00008380	prp-38	68	58.824	ENSTNIG00000005533	prpf38a	63	61.929	Tetraodon_nigroviridis
WBGene00008380	prp-38	67	61.574	ENSTBEG00000000725	PRPF38A	63	62.564	Tupaia_belangeri
WBGene00008380	prp-38	67	61.574	ENSTTRG00000016139	PRPF38A	63	62.564	Tursiops_truncatus
WBGene00008380	prp-38	67	61.574	ENSUAMG00000000625	PRPF38A	63	62.564	Ursus_americanus
WBGene00008380	prp-38	67	61.574	ENSUMAG00000022674	PRPF38A	63	62.564	Ursus_maritimus
WBGene00008380	prp-38	67	61.574	ENSVPAG00000000907	PRPF38A	63	62.564	Vicugna_pacos
WBGene00008380	prp-38	67	61.574	ENSVVUG00000004475	PRPF38A	63	62.564	Vulpes_vulpes
WBGene00008380	prp-38	59	65.426	ENSXETG00000008060	prpf38a	63	63.590	Xenopus_tropicalis
WBGene00008380	prp-38	59	63.684	ENSXCOG00000007393	prpf38a	65	61.929	Xiphophorus_couchianus
WBGene00008380	prp-38	59	65.426	ENSXMAG00000026143	prpf38a	63	63.590	Xiphophorus_maculatus