EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00008452 (Gene tree)
Gene ID: -
Gene Symbol: mrps-5
Alias: -
Full Name: Putative 28S ribosomal protein S5%2C mitochondrial
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: confidence
Strand: Plus strand
Length: 2299 bases
Position: chrV:12563487-12565785
Accession: Q93425
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
E02A10	Ribosomal_S5_C	PF03719.15	2.2e-18	1	1
E02A10	Ribosomal_S5	PF00333.20	1.6e-15	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
E02A10.1	-	1457	NM_073744	E02A10.1	436 (aa)	NP_506145	Q93425

Gene Model

Click here to download WBGene00008452's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00008452's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00008452	mrps-5	75	35.542	ENSG00000144029	MRPS5	74	36.446	Homo_sapiens
WBGene00008452	mrps-5	78	37.500	ENSAPOG00000006057	mrps5	79	37.971	Acanthochromis_polyacanthus
WBGene00008452	mrps-5	76	35.928	ENSAMEG00000009757	MRPS5	75	36.826	Ailuropoda_melanoleuca
WBGene00008452	mrps-5	74	34.877	ENSACIG00000011594	mrps5	75	34.877	Amphilophus_citrinellus
WBGene00008452	mrps-5	78	37.971	ENSAPEG00000000853	mrps5	81	38.081	Amphiprion_percula
WBGene00008452	mrps-5	78	36.337	ENSATEG00000012264	mrps5	81	36.337	Anabas_testudineus
WBGene00008452	mrps-5	62	38.007	ENSAPLG00000002557	MRPS5	82	37.143	Anas_platyrhynchos
WBGene00008452	mrps-5	75	36.145	ENSACAG00000000830	MRPS5	79	36.446	Anolis_carolinensis
WBGene00008452	mrps-5	75	35.241	ENSANAG00000030230	MRPS5	74	36.446	Aotus_nancymaae
WBGene00008452	mrps-5	74	32.727	ENSACLG00000025759	mrps5	81	33.841	Astatotilapia_calliptera
WBGene00008452	mrps-5	73	37.578	ENSAMXG00000033743	mrps5	80	37.267	Astyanax_mexicanus
WBGene00008452	mrps-5	76	36.228	ENSBTAG00000008241	MRPS5	75	36.826	Bos_taurus
WBGene00008452	mrps-5	75	35.928	ENSCJAG00000018942	MRPS5	74	36.747	Callithrix_jacchus
WBGene00008452	mrps-5	76	36.228	ENSCAFG00000007040	MRPS5	75	36.826	Canis_familiaris
WBGene00008452	mrps-5	76	36.228	ENSCAFG00020019650	MRPS5	75	36.826	Canis_lupus_dingo
WBGene00008452	mrps-5	76	36.228	ENSCHIG00000020942	MRPS5	75	36.826	Capra_hircus
WBGene00008452	mrps-5	75	36.310	ENSTSYG00000001808	MRPS5	74	36.607	Carlito_syrichta
WBGene00008452	mrps-5	75	37.349	ENSCAPG00000016441	MRPS5	76	37.952	Cavia_aperea
WBGene00008452	mrps-5	75	37.349	ENSCPOG00000004405	MRPS5	74	37.952	Cavia_porcellus
WBGene00008452	mrps-5	75	35.928	ENSCCAG00000026269	MRPS5	74	36.747	Cebus_capucinus
WBGene00008452	mrps-5	75	37.651	ENSCATG00000031215	MRPS5	74	37.952	Cercocebus_atys
WBGene00008452	mrps-5	75	37.651	ENSCLAG00000006224	MRPS5	74	38.253	Chinchilla_lanigera
WBGene00008452	mrps-5	75	35.843	ENSCSAG00000017411	MRPS5	64	36.145	Chlorocebus_sabaeus
WBGene00008452	mrps-5	75	35.843	ENSCPBG00000018258	MRPS5	83	36.145	Chrysemys_picta_bellii
WBGene00008452	mrps-5	70	35.897	ENSCING00000005698	-	75	35.897	Ciona_intestinalis
WBGene00008452	mrps-5	75	38.253	ENSCANG00000042646	MRPS5	78	38.253	Colobus_angolensis_palliatus
WBGene00008452	mrps-5	75	32.831	ENSCANG00000042096	-	78	32.831	Colobus_angolensis_palliatus
WBGene00008452	mrps-5	74	36.778	ENSCGRG00001019558	Mrps5	78	36.390	Cricetulus_griseus_chok1gshd
WBGene00008452	mrps-5	74	36.778	ENSCGRG00000006508	Mrps5	78	36.390	Cricetulus_griseus_crigri
WBGene00008452	mrps-5	79	36.517	ENSCSEG00000000495	mrps5	84	36.517	Cynoglossus_semilaevis
WBGene00008452	mrps-5	65	35.664	ENSCVAG00000015403	mrps5	85	35.664	Cyprinodon_variegatus
WBGene00008452	mrps-5	71	34.921	ENSDARG00000062209	mrps5	76	34.921	Danio_rerio
WBGene00008452	mrps-5	66	34.256	ENSDNOG00000007247	MRPS5	64	34.256	Dasypus_novemcinctus
WBGene00008452	mrps-5	73	37.309	ENSDORG00000001493	Mrps5	73	37.920	Dipodomys_ordii
WBGene00008452	mrps-5	87	33.506	FBgn0044510	mRpS5	89	33.506	Drosophila_melanogaster
WBGene00008452	mrps-5	76	36.228	ENSEASG00005005278	MRPS5	75	37.126	Equus_asinus_asinus
WBGene00008452	mrps-5	76	36.527	ENSECAG00000001234	MRPS5	75	37.425	Equus_caballus
WBGene00008452	mrps-5	78	31.054	ENSEEUG00000011502	MRPS5	79	31.054	Erinaceus_europaeus
WBGene00008452	mrps-5	74	37.920	ENSELUG00000003664	mrps5	83	37.037	Esox_lucius
WBGene00008452	mrps-5	76	36.527	ENSFCAG00000009358	MRPS5	64	37.126	Felis_catus
WBGene00008452	mrps-5	62	37.269	ENSFALG00000002327	MRPS5	75	37.143	Ficedula_albicollis
WBGene00008452	mrps-5	75	35.843	ENSFDAG00000004115	MRPS5	74	36.747	Fukomys_damarensis
WBGene00008452	mrps-5	74	36.086	ENSFHEG00000007507	mrps5	86	36.086	Fundulus_heteroclitus
WBGene00008452	mrps-5	62	38.376	ENSGALG00000008550	MRPS5	74	37.460	Gallus_gallus
WBGene00008452	mrps-5	76	36.716	ENSGAFG00000012707	mrps5	80	36.716	Gambusia_affinis
WBGene00008452	mrps-5	58	32.171	ENSGACG00000000216	mrps5	83	32.171	Gasterosteus_aculeatus
WBGene00008452	mrps-5	64	34.875	ENSGAGG00000005665	MRPS5	78	35.231	Gopherus_agassizii
WBGene00008452	mrps-5	75	35.241	ENSGGOG00000001750	MRPS5	74	36.145	Gorilla_gorilla
WBGene00008452	mrps-5	78	30.548	ENSHBUG00000006687	mrps5	88	30.028	Haplochromis_burtoni
WBGene00008452	mrps-5	75	36.446	ENSHGLG00000016278	MRPS5	74	37.048	Heterocephalus_glaber_female
WBGene00008452	mrps-5	75	36.446	ENSHGLG00100013743	MRPS5	74	37.048	Heterocephalus_glaber_male
WBGene00008452	mrps-5	67	34.343	ENSHCOG00000014200	mrps5	84	34.343	Hippocampus_comes
WBGene00008452	mrps-5	71	38.585	ENSIPUG00000018395	mrps5	64	38.585	Ictalurus_punctatus
WBGene00008452	mrps-5	75	36.446	ENSJJAG00000022513	Mrps5	78	37.349	Jaculus_jaculus
WBGene00008452	mrps-5	73	35.714	ENSKMAG00000016581	mrps5	77	36.335	Kryptolebias_marmoratus
WBGene00008452	mrps-5	73	37.082	ENSLBEG00000007499	mrps5	69	37.082	Labrus_bergylta
WBGene00008452	mrps-5	56	30.924	ENSLOCG00000015618	mrps5	82	30.924	Lepisosteus_oculatus
WBGene00008452	mrps-5	75	36.145	ENSMFAG00000043526	MRPS5	74	36.747	Macaca_fascicularis
WBGene00008452	mrps-5	75	33.837	ENSMFAG00000002850	-	79	33.837	Macaca_fascicularis
WBGene00008452	mrps-5	78	33.430	ENSMMUG00000003033	-	84	34.012	Macaca_mulatta
WBGene00008452	mrps-5	75	36.446	ENSMNEG00000041571	-	74	37.048	Macaca_nemestrina
WBGene00008452	mrps-5	75	33.837	ENSMNEG00000029316	-	79	33.837	Macaca_nemestrina
WBGene00008452	mrps-5	75	33.837	ENSMNEG00000028934	-	73	34.139	Macaca_nemestrina
WBGene00008452	mrps-5	75	33.735	ENSMLEG00000006829	-	83	34.337	Mandrillus_leucophaeus
WBGene00008452	mrps-5	75	37.651	ENSMLEG00000032039	MRPS5	66	37.952	Mandrillus_leucophaeus
WBGene00008452	mrps-5	78	36.232	ENSMAMG00000022074	mrps5	83	36.232	Mastacembelus_armatus
WBGene00008452	mrps-5	74	32.727	ENSMZEG00005020014	mrps5	81	33.841	Maylandia_zebra
WBGene00008452	mrps-5	62	38.007	ENSMGAG00000007201	MRPS5	88	37.540	Meleagris_gallopavo
WBGene00008452	mrps-5	74	36.474	ENSMAUG00000002765	Mrps5	78	36.103	Mesocricetus_auratus
WBGene00008452	mrps-5	75	33.030	ENSMICG00000046753	-	74	33.636	Microcebus_murinus
WBGene00008452	mrps-5	63	32.014	ENSMICG00000007318	-	74	32.734	Microcebus_murinus
WBGene00008452	mrps-5	74	36.086	ENSMOCG00000001710	Mrps5	73	36.697	Microtus_ochrogaster
WBGene00008452	mrps-5	78	31.609	ENSMMOG00000007366	mrps5	81	33.429	Mola_mola
WBGene00008452	mrps-5	75	37.349	ENSMODG00000007235	MRPS5	83	37.952	Monodelphis_domestica
WBGene00008452	mrps-5	78	33.819	ENSMALG00000020388	mrps5	80	33.819	Monopterus_albus
WBGene00008452	mrps-5	71	36.218	MGP_CAROLIEiJ_G0024262	Mrps5	69	36.859	Mus_caroli
WBGene00008452	mrps-5	71	36.218	ENSMUSG00000027374	Mrps5	69	36.859	Mus_musculus
WBGene00008452	mrps-5	71	36.218	MGP_SPRETEiJ_G0025182	Mrps5	69	36.859	Mus_spretus
WBGene00008452	mrps-5	75	35.329	ENSMPUG00000009170	MRPS5	74	35.928	Mustela_putorius_furo
WBGene00008452	mrps-5	76	36.826	ENSMLUG00000003183	MRPS5	75	37.425	Myotis_lucifugus
WBGene00008452	mrps-5	75	35.843	ENSNGAG00000013050	Mrps5	74	36.747	Nannospalax_galili
WBGene00008452	mrps-5	75	36.747	ENSNLEG00000000002	MRPS5	74	37.349	Nomascus_leucogenys
WBGene00008452	mrps-5	78	35.447	ENSOPRG00000005079	MRPS5	80	36.023	Ochotona_princeps
WBGene00008452	mrps-5	75	37.500	ENSODEG00000006937	MRPS5	79	38.393	Octodon_degus
WBGene00008452	mrps-5	79	35.613	ENSONIG00000001150	mrps5	84	35.613	Oreochromis_niloticus
WBGene00008452	mrps-5	75	36.905	ENSOCUG00000003547	MRPS5	74	37.500	Oryctolagus_cuniculus
WBGene00008452	mrps-5	73	37.695	ENSORLG00020014512	mrps5	75	37.695	Oryzias_latipes_hni
WBGene00008452	mrps-5	73	37.072	ENSORLG00015019956	mrps5	75	37.072	Oryzias_latipes_hsok
WBGene00008452	mrps-5	75	37.690	ENSOMEG00000013610	mrps5	73	37.690	Oryzias_melastigma
WBGene00008452	mrps-5	75	36.446	ENSOGAG00000031363	MRPS5	74	37.048	Otolemur_garnettii
WBGene00008452	mrps-5	76	36.418	ENSOARG00000014191	MRPS5	76	37.015	Ovis_aries
WBGene00008452	mrps-5	75	35.542	ENSPPAG00000039966	MRPS5	74	36.446	Pan_paniscus
WBGene00008452	mrps-5	76	36.527	ENSPPRG00000004724	MRPS5	75	37.126	Panthera_pardus
WBGene00008452	mrps-5	76	36.527	ENSPTIG00000011824	MRPS5	75	37.126	Panthera_tigris_altaica
WBGene00008452	mrps-5	75	35.542	ENSPTRG00000012209	MRPS5	74	36.446	Pan_troglodytes
WBGene00008452	mrps-5	75	37.651	ENSPANG00000022839	MRPS5	74	37.952	Papio_anubis
WBGene00008452	mrps-5	75	34.337	ENSPANG00000032455	-	79	34.337	Papio_anubis
WBGene00008452	mrps-5	74	34.969	ENSPKIG00000022123	mrps5	78	35.890	Paramormyrops_kingsleyae
WBGene00008452	mrps-5	75	35.843	ENSPSIG00000004820	MRPS5	86	36.145	Pelodiscus_sinensis
WBGene00008452	mrps-5	69	36.393	ENSPMGG00000003674	mrps5	78	36.393	Periophthalmus_magnuspinnatus
WBGene00008452	mrps-5	74	36.086	ENSPEMG00000012667	Mrps5	78	35.735	Peromyscus_maniculatus_bairdii
WBGene00008452	mrps-5	67	36.149	ENSPMAG00000007465	mrps5	99	36.149	Petromyzon_marinus
WBGene00008452	mrps-5	75	37.048	ENSPCIG00000003207	-	74	37.048	Phascolarctos_cinereus
WBGene00008452	mrps-5	76	37.313	ENSPFOG00000006753	mrps5	80	37.910	Poecilia_formosa
WBGene00008452	mrps-5	76	37.612	ENSPLAG00000015964	mrps5	80	38.209	Poecilia_latipinna
WBGene00008452	mrps-5	76	37.313	ENSPMEG00000023362	mrps5	80	37.910	Poecilia_mexicana
WBGene00008452	mrps-5	76	36.716	ENSPREG00000001722	mrps5	80	37.313	Poecilia_reticulata
WBGene00008452	mrps-5	76	36.228	ENSPPYG00000012051	MRPS5	75	37.015	Pongo_abelii
WBGene00008452	mrps-5	75	36.607	ENSPCOG00000026442	MRPS5	79	37.500	Propithecus_coquereli
WBGene00008452	mrps-5	80	36.467	ENSPVAG00000006094	MRPS5	78	37.037	Pteropus_vampyrus
WBGene00008452	mrps-5	79	35.143	ENSPNYG00000009861	mrps5	83	35.143	Pundamilia_nyererei
WBGene00008452	mrps-5	73	36.760	ENSPNAG00000011574	mrps5	75	35.474	Pygocentrus_nattereri
WBGene00008452	mrps-5	71	36.218	ENSRNOG00000015192	Mrps5	69	36.859	Rattus_norvegicus
WBGene00008452	mrps-5	75	37.651	ENSRROG00000037350	MRPS5	74	37.952	Rhinopithecus_roxellana
WBGene00008452	mrps-5	75	31.325	ENSRROG00000036340	-	76	34.036	Rhinopithecus_roxellana
WBGene00008452	mrps-5	75	35.629	ENSSBOG00000021540	MRPS5	74	36.747	Saimiri_boliviensis_boliviensis
WBGene00008452	mrps-5	75	37.349	ENSSHAG00000012969	MRPS5	74	38.253	Sarcophilus_harrisii
WBGene00008452	mrps-5	74	35.385	ENSSFOG00015006898	mrps5	78	36.308	Scleropages_formosus
WBGene00008452	mrps-5	78	34.012	ENSSMAG00000019624	mrps5	82	34.593	Scophthalmus_maximus
WBGene00008452	mrps-5	78	35.942	ENSSDUG00000019792	mrps5	83	36.391	Seriola_dumerili
WBGene00008452	mrps-5	78	34.593	ENSSLDG00000016726	mrps5	81	34.593	Seriola_lalandi_dorsalis
WBGene00008452	mrps-5	59	34.981	ENSSPUG00000018881	MRPS5	83	34.202	Sphenodon_punctatus
WBGene00008452	mrps-5	78	36.047	ENSSPAG00000021042	mrps5	81	36.047	Stegastes_partitus
WBGene00008452	mrps-5	76	36.228	ENSSSCG00000008113	MRPS5	75	36.826	Sus_scrofa
WBGene00008452	mrps-5	62	36.765	ENSTGUG00000002166	MRPS5	81	36.218	Taeniopygia_guttata
WBGene00008452	mrps-5	75	31.928	ENSTBEG00000013607	MRPS5	84	32.530	Tupaia_belangeri
WBGene00008452	mrps-5	71	38.217	ENSTTRG00000004963	MRPS5	74	39.103	Tursiops_truncatus
WBGene00008452	mrps-5	65	34.035	ENSUAMG00000011086	MRPS5	70	34.737	Ursus_americanus
WBGene00008452	mrps-5	76	37.126	ENSUMAG00000012079	MRPS5	75	37.725	Ursus_maritimus
WBGene00008452	mrps-5	76	35.928	ENSVPAG00000003674	MRPS5	79	36.527	Vicugna_pacos
WBGene00008452	mrps-5	76	36.228	ENSVVUG00000027421	MRPS5	75	36.826	Vulpes_vulpes
WBGene00008452	mrps-5	74	36.697	ENSXETG00000022440	mrps5	89	37.195	Xenopus_tropicalis
WBGene00008452	mrps-5	76	34.925	ENSXCOG00000000561	mrps5	83	34.925	Xiphophorus_couchianus
WBGene00008452	mrps-5	76	37.015	ENSXMAG00000028833	mrps5	80	37.015	Xiphophorus_maculatus