EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00008502 (Gene tree)
Gene ID: -
Gene Symbol: skih-2
Alias: -
Full Name: SKI (Yeast SuperKIller) Helicase homolog
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 6795 bases
Position: chrIV:11135566-11142360
Accession: Q19103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F01G4	rRNA_proc-arch	PF13234.6	2.4e-08	1	1
F01G4	DEAD	PF00270.29	7.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F01G4.3	-	3927	NM_069683	F01G4.3	1266 (aa)	NP_502084	Q19103

Gene Model

Click here to download WBGene00008502's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00008502's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00008502	skih-2	64	45.686	WBGene00012342	mtr-4	75	44.118

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00008502	skih-2	99	39.814	ENSG00000204351	SKIV2L	96	39.781	Homo_sapiens
WBGene00008502	skih-2	99	41.667	ENSAPOG00000008257	skiv2l	93	42.560	Acanthochromis_polyacanthus
WBGene00008502	skih-2	99	39.671	ENSAMEG00000002078	SKIV2L	96	39.844	Ailuropoda_melanoleuca
WBGene00008502	skih-2	96	42.058	ENSACIG00000016719	skiv2l	93	41.734	Amphilophus_citrinellus
WBGene00008502	skih-2	96	41.687	ENSAOCG00000017352	skiv2l	93	41.793	Amphiprion_ocellaris
WBGene00008502	skih-2	96	41.607	ENSAPEG00000001055	skiv2l	93	41.713	Amphiprion_percula
WBGene00008502	skih-2	99	40.976	ENSATEG00000007601	skiv2l	95	40.976	Anabas_testudineus
WBGene00008502	skih-2	79	47.426	ENSACAG00000011746	SKIV2L	95	42.578	Anolis_carolinensis
WBGene00008502	skih-2	99	40.109	ENSANAG00000037992	SKIV2L	96	40.031	Aotus_nancymaae
WBGene00008502	skih-2	99	41.135	ENSACLG00000006886	skiv2l	95	41.446	Astatotilapia_calliptera
WBGene00008502	skih-2	93	41.583	ENSAMXG00000011517	skiv2l	92	40.568	Astyanax_mexicanus
WBGene00008502	skih-2	99	39.720	ENSBTAG00000005587	SKIV2L	96	39.735	Bos_taurus
WBGene00008502	skih-2	99	40.107	ENSCJAG00000002263	SKIV2L	96	39.782	Callithrix_jacchus
WBGene00008502	skih-2	99	39.420	ENSCAFG00000000679	SKIV2L	96	39.266	Canis_familiaris
WBGene00008502	skih-2	99	39.420	ENSCAFG00020000948	SKIV2L	96	39.266	Canis_lupus_dingo
WBGene00008502	skih-2	99	39.720	ENSCHIG00000012897	SKIV2L	96	39.813	Capra_hircus
WBGene00008502	skih-2	99	40.109	ENSTSYG00000012133	SKIV2L	96	39.969	Carlito_syrichta
WBGene00008502	skih-2	99	39.269	ENSCPOG00000001307	SKIV2L	96	39.347	Cavia_porcellus
WBGene00008502	skih-2	99	39.938	ENSCCAG00000026206	SKIV2L	96	39.953	Cebus_capucinus
WBGene00008502	skih-2	78	44.668	ENSCATG00000036901	SKIV2L	96	39.468	Cercocebus_atys
WBGene00008502	skih-2	99	39.593	ENSCLAG00000007678	SKIV2L	96	39.813	Chinchilla_lanigera
WBGene00008502	skih-2	99	39.985	ENSCSAG00000008988	SKIV2L	96	39.922	Chlorocebus_sabaeus
WBGene00008502	skih-2	82	45.143	ENSCPBG00000000343	SKIV2L	91	44.886	Chrysemys_picta_bellii
WBGene00008502	skih-2	95	38.993	ENSCING00000005576	-	98	38.830	Ciona_intestinalis
WBGene00008502	skih-2	78	44.689	ENSCANG00000039709	SKIV2L	96	39.406	Colobus_angolensis_palliatus
WBGene00008502	skih-2	99	39.828	ENSCGRG00001008385	Skiv2l	96	40.063	Cricetulus_griseus_chok1gshd
WBGene00008502	skih-2	99	41.140	ENSCSEG00000011326	skiv2l	95	41.109	Cynoglossus_semilaevis
WBGene00008502	skih-2	99	41.505	ENSCVAG00000003072	skiv2l	96	41.505	Cyprinodon_variegatus
WBGene00008502	skih-2	93	42.600	ENSDARG00000062206	skiv2l	90	41.587	Danio_rerio
WBGene00008502	skih-2	79	45.844	ENSDNOG00000037590	SKIV2L	77	46.447	Dasypus_novemcinctus
WBGene00008502	skih-2	95	38.689	FBgn0039117	tst	95	38.430	Drosophila_melanogaster
WBGene00008502	skih-2	69	60.656	ENSETEG00000009522	SKIV2L	67	60.656	Echinops_telfairi
WBGene00008502	skih-2	86	41.912	ENSEBUG00000013680	-	89	41.595	Eptatretus_burgeri
WBGene00008502	skih-2	78	44.814	ENSEASG00005015534	SKIV2L	99	40.179	Equus_asinus_asinus
WBGene00008502	skih-2	73	44.013	ENSECAG00000021823	SKIV2L	91	38.944	Equus_caballus
WBGene00008502	skih-2	53	55.431	ENSEEUG00000005049	SKIV2L	56	54.682	Erinaceus_europaeus
WBGene00008502	skih-2	99	40.603	ENSELUG00000000181	skiv2l	95	40.804	Esox_lucius
WBGene00008502	skih-2	99	39.517	ENSFCAG00000004519	SKIV2L	96	39.300	Felis_catus
WBGene00008502	skih-2	78	43.548	ENSFDAG00000009438	SKIV2L	96	38.768	Fukomys_damarensis
WBGene00008502	skih-2	99	40.846	ENSFHEG00000008853	skiv2l	96	40.846	Fundulus_heteroclitus
WBGene00008502	skih-2	96	40.256	ENSGMOG00000005926	skiv2l	92	40.256	Gadus_morhua
WBGene00008502	skih-2	78	41.461	ENSGALG00000035499	SKIV2L	77	67.526	Gallus_gallus
WBGene00008502	skih-2	99	41.289	ENSGAFG00000002382	skiv2l	96	40.892	Gambusia_affinis
WBGene00008502	skih-2	99	40.388	ENSGACG00000002927	skiv2l	95	40.775	Gasterosteus_aculeatus
WBGene00008502	skih-2	99	39.892	ENSGGOG00000002270	SKIV2L	96	39.814	Gorilla_gorilla
WBGene00008502	skih-2	99	41.163	ENSHBUG00000000726	skiv2l	95	41.473	Haplochromis_burtoni
WBGene00008502	skih-2	99	39.097	ENSHGLG00000016596	SKIV2L	96	38.850	Heterocephalus_glaber_female
WBGene00008502	skih-2	99	38.240	ENSHGLG00100014161	SKIV2L	96	37.995	Heterocephalus_glaber_male
WBGene00008502	skih-2	80	45.029	ENSHCOG00000007191	skiv2l	83	44.971	Hippocampus_comes
WBGene00008502	skih-2	96	42.194	ENSIPUG00000016263	skiv2l	94	40.776	Ictalurus_punctatus
WBGene00008502	skih-2	99	39.657	ENSSTOG00000014596	SKIV2L	96	39.688	Ictidomys_tridecemlineatus
WBGene00008502	skih-2	99	39.829	ENSLAFG00000014231	SKIV2L	96	39.860	Loxodonta_africana
WBGene00008502	skih-2	78	44.734	ENSMFAG00000034235	SKIV2L	96	39.468	Macaca_fascicularis
WBGene00008502	skih-2	99	39.640	ENSMMUG00000000736	SKIV2L	96	39.546	Macaca_mulatta
WBGene00008502	skih-2	78	44.734	ENSMNEG00000044474	SKIV2L	96	39.188	Macaca_nemestrina
WBGene00008502	skih-2	78	44.634	ENSMLEG00000030512	SKIV2L	96	39.468	Mandrillus_leucophaeus
WBGene00008502	skih-2	99	40.559	ENSMAMG00000002927	skiv2l	96	40.187	Mastacembelus_armatus
WBGene00008502	skih-2	99	41.318	ENSMZEG00005026415	skiv2l	95	41.628	Maylandia_zebra
WBGene00008502	skih-2	99	39.593	ENSMAUG00000018613	Skiv2l	96	39.453	Mesocricetus_auratus
WBGene00008502	skih-2	99	39.517	ENSMICG00000046331	SKIV2L	96	39.609	Microcebus_murinus
WBGene00008502	skih-2	99	38.605	ENSMOCG00000014240	Skiv2l	96	38.624	Microtus_ochrogaster
WBGene00008502	skih-2	80	45.111	ENSMMOG00000014547	skiv2l	80	45.111	Mola_mola
WBGene00008502	skih-2	78	44.821	ENSMODG00000015052	SKIV2L	96	39.443	Monodelphis_domestica
WBGene00008502	skih-2	93	41.230	ENSMALG00000010535	skiv2l	91	40.898	Monopterus_albus
WBGene00008502	skih-2	99	39.358	MGP_CAROLIEiJ_G0021477	Skiv2l	95	39.280	Mus_caroli
WBGene00008502	skih-2	99	39.562	ENSMUSG00000040356	Skiv2l	95	39.406	Mus_musculus
WBGene00008502	skih-2	99	39.202	MGP_PahariEiJ_G0020472	Skiv2l	95	39.219	Mus_pahari
WBGene00008502	skih-2	99	39.640	MGP_SPRETEiJ_G0022382	Skiv2l	95	39.484	Mus_spretus
WBGene00008502	skih-2	99	39.420	ENSMPUG00000010567	SKIV2L	96	39.344	Mustela_putorius_furo
WBGene00008502	skih-2	99	39.486	ENSMLUG00000000628	SKIV2L	96	39.486	Myotis_lucifugus
WBGene00008502	skih-2	96	41.191	ENSNBRG00000018650	skiv2l	92	41.001	Neolamprologus_brichardi
WBGene00008502	skih-2	80	45.960	ENSNLEG00000006451	SKIV2L	85	43.619	Nomascus_leucogenys
WBGene00008502	skih-2	99	38.906	ENSOPRG00000003972	SKIV2L	96	38.984	Ochotona_princeps
WBGene00008502	skih-2	99	39.673	ENSODEG00000017516	SKIV2L	96	39.844	Octodon_degus
WBGene00008502	skih-2	99	41.272	ENSONIG00000013500	skiv2l	95	41.524	Oreochromis_niloticus
WBGene00008502	skih-2	99	39.564	ENSOCUG00000007019	SKIV2L	96	39.595	Oryctolagus_cuniculus
WBGene00008502	skih-2	99	41.355	ENSORLG00000002021	skiv2l	96	41.145	Oryzias_latipes
WBGene00008502	skih-2	99	40.966	ENSORLG00020009462	skiv2l	96	40.681	Oryzias_latipes_hni
WBGene00008502	skih-2	99	40.839	ENSORLG00015016750	skiv2l	96	40.632	Oryzias_latipes_hsok
WBGene00008502	skih-2	93	42.118	ENSOMEG00000008531	skiv2l	89	42.062	Oryzias_melastigma
WBGene00008502	skih-2	99	40.062	ENSOGAG00000009578	SKIV2L	96	40.016	Otolemur_garnettii
WBGene00008502	skih-2	99	38.059	ENSOARG00000002411	-	94	38.224	Ovis_aries
WBGene00008502	skih-2	99	39.647	ENSPPAG00000040211	SKIV2L	96	39.510	Pan_paniscus
WBGene00008502	skih-2	99	39.595	ENSPPRG00000005017	SKIV2L	96	39.626	Panthera_pardus
WBGene00008502	skih-2	99	39.127	ENSPTIG00000021656	SKIV2L	96	39.158	Panthera_tigris_altaica
WBGene00008502	skih-2	99	39.814	ENSPTRG00000017997	SKIV2L	96	39.737	Pan_troglodytes
WBGene00008502	skih-2	99	39.028	ENSPANG00000011501	SKIV2L	96	38.919	Papio_anubis
WBGene00008502	skih-2	93	42.342	ENSPKIG00000011876	skiv2l	89	42.071	Paramormyrops_kingsleyae
WBGene00008502	skih-2	79	43.762	ENSPMGG00000019707	skiv2l	92	39.871	Periophthalmus_magnuspinnatus
WBGene00008502	skih-2	99	39.199	ENSPEMG00000019001	Skiv2l	96	39.389	Peromyscus_maniculatus_bairdii
WBGene00008502	skih-2	98	39.425	ENSPCIG00000018792	SKIV2L	96	39.583	Phascolarctos_cinereus
WBGene00008502	skih-2	99	41.077	ENSPFOG00000002424	skiv2l	96	40.835	Poecilia_formosa
WBGene00008502	skih-2	99	41.172	ENSPLAG00000018304	skiv2l	96	41.067	Poecilia_latipinna
WBGene00008502	skih-2	99	41.190	ENSPMEG00000006997	skiv2l	96	40.913	Poecilia_mexicana
WBGene00008502	skih-2	78	46.461	ENSPREG00000002277	skiv2l	79	46.461	Poecilia_reticulata
WBGene00008502	skih-2	99	39.702	ENSPPYG00000016472	SKIV2L	96	39.702	Pongo_abelii
WBGene00008502	skih-2	69	59.016	ENSPCAG00000004178	SKIV2L	67	59.016	Procavia_capensis
WBGene00008502	skih-2	99	39.751	ENSPCOG00000010308	SKIV2L	96	39.844	Propithecus_coquereli
WBGene00008502	skih-2	98	39.657	ENSPVAG00000005136	SKIV2L	96	39.548	Pteropus_vampyrus
WBGene00008502	skih-2	80	45.898	ENSPNYG00000017853	skiv2l	82	45.605	Pundamilia_nyererei
WBGene00008502	skih-2	93	42.371	ENSPNAG00000011823	skiv2l	89	42.075	Pygocentrus_nattereri
WBGene00008502	skih-2	99	39.171	ENSRNOG00000000421	Skiv2l	95	39.093	Rattus_norvegicus
WBGene00008502	skih-2	78	44.056	ENSRBIG00000035485	SKIV2L	96	39.080	Rhinopithecus_bieti
WBGene00008502	skih-2	78	44.634	ENSRROG00000036429	SKIV2L	96	39.468	Rhinopithecus_roxellana
WBGene00008502	skih-2	99	39.785	ENSSBOG00000027920	SKIV2L	96	39.969	Saimiri_boliviensis_boliviensis
WBGene00008502	skih-2	78	44.467	ENSSHAG00000008963	SKIV2L	96	38.125	Sarcophilus_harrisii
WBGene00008502	skih-2	92	42.725	ENSSFOG00015016930	skiv2l	89	42.023	Scleropages_formosus
WBGene00008502	skih-2	99	40.398	ENSSMAG00000020185	skiv2l	96	40.511	Scophthalmus_maximus
WBGene00008502	skih-2	99	40.625	ENSSDUG00000019977	skiv2l	95	40.625	Seriola_dumerili
WBGene00008502	skih-2	99	39.922	ENSSLDG00000024382	skiv2l	95	39.609	Seriola_lalandi_dorsalis
WBGene00008502	skih-2	98	41.056	ENSSPUG00000012945	SKIV2L	76	45.127	Sphenodon_punctatus
WBGene00008502	skih-2	95	39.159	ENSSPAG00000012904	skiv2l	95	38.929	Stegastes_partitus
WBGene00008502	skih-2	99	39.765	ENSSSCG00000001424	SKIV2L	96	39.984	Sus_scrofa
WBGene00008502	skih-2	60	56.881	ENSTRUG00000000966	skiv2l	80	52.733	Takifugu_rubripes
WBGene00008502	skih-2	78	45.373	ENSTNIG00000004382	skiv2l	92	41.030	Tetraodon_nigroviridis
WBGene00008502	skih-2	94	39.837	ENSTBEG00000003462	SKIV2L	90	39.721	Tupaia_belangeri
WBGene00008502	skih-2	99	36.620	ENSTTRG00000005931	SKIV2L	96	36.776	Tursiops_truncatus
WBGene00008502	skih-2	99	39.515	ENSUAMG00000024336	SKIV2L	96	39.688	Ursus_americanus
WBGene00008502	skih-2	95	40.016	ENSUMAG00000012666	SKIV2L	99	40.196	Ursus_maritimus
WBGene00008502	skih-2	99	39.263	ENSVVUG00000022807	SKIV2L	96	39.280	Vulpes_vulpes
WBGene00008502	skih-2	78	45.946	ENSXETG00000010932	skiv2l	76	45.746	Xenopus_tropicalis
WBGene00008502	skih-2	99	41.091	ENSXCOG00000019517	skiv2l	93	41.091	Xiphophorus_couchianus
WBGene00008502	skih-2	99	41.199	ENSXMAG00000014079	skiv2l	96	41.199	Xiphophorus_maculatus