EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00008642 (Gene tree)
Gene ID: -
Gene Symbol: F10B5.8
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 2266 bases
Position: chrII:8141213-8143478
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F10B5	Beta-Casp	PF10996.8	1.4e-24	1	1
F10B5	Lactamase_B	PF00753.27	9.1e-12	1	1
F10B5	RMMBL	PF07521.12	1.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F10B5.8	-	2081	NM_063305	F10B5.8	608 (aa)	NP_495706	Q9U3K2

Gene Model

Click here to download WBGene00008642's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00008642's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00008642	F10B5.8	73	37.418	WBGene00013460	cpsf-3	63	37.418

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00008642	F10B5.8	79	73.810	ENSG00000127054	INTS11	100	75.714	Homo_sapiens
WBGene00008642	F10B5.8	78	67.715	ENSAPOG00000022656	ints11	79	67.715	Acanthochromis_polyacanthus
WBGene00008642	F10B5.8	81	65.112	ENSAMEG00000013755	INTS11	82	65.112	Ailuropoda_melanoleuca
WBGene00008642	F10B5.8	78	67.296	ENSACIG00000016715	ints11	79	67.296	Amphilophus_citrinellus
WBGene00008642	F10B5.8	78	67.505	ENSAOCG00000021172	ints11	79	67.505	Amphiprion_ocellaris
WBGene00008642	F10B5.8	78	67.505	ENSAPEG00000024732	ints11	79	67.505	Amphiprion_percula
WBGene00008642	F10B5.8	78	67.505	ENSATEG00000024376	ints11	79	67.505	Anabas_testudineus
WBGene00008642	F10B5.8	78	67.850	ENSAPLG00000005238	INTS11	79	67.850	Anas_platyrhynchos
WBGene00008642	F10B5.8	77	68.856	ENSACAG00000013975	INTS11	79	68.856	Anolis_carolinensis
WBGene00008642	F10B5.8	79	73.810	ENSANAG00000034133	INTS11	91	73.810	Aotus_nancymaae
WBGene00008642	F10B5.8	78	67.296	ENSACLG00000018782	ints11	77	67.296	Astatotilapia_calliptera
WBGene00008642	F10B5.8	78	67.715	ENSAMXG00000038758	ints11	79	67.715	Astyanax_mexicanus
WBGene00008642	F10B5.8	81	65.112	ENSBTAG00000007620	INTS11	82	65.112	Bos_taurus
WBGene00008642	F10B5.8	79	73.810	ENSCJAG00000011144	INTS11	91	73.810	Callithrix_jacchus
WBGene00008642	F10B5.8	77	67.238	ENSCAFG00000019287	INTS11	78	67.238	Canis_familiaris
WBGene00008642	F10B5.8	77	67.238	ENSCAFG00020011566	INTS11	78	67.238	Canis_lupus_dingo
WBGene00008642	F10B5.8	81	65.112	ENSCHIG00000023117	INTS11	82	65.112	Capra_hircus
WBGene00008642	F10B5.8	77	66.167	ENSTSYG00000012018	INTS11	84	71.915	Carlito_syrichta
WBGene00008642	F10B5.8	76	51.073	ENSCAPG00000012788	INTS11	74	51.073	Cavia_aperea
WBGene00008642	F10B5.8	77	67.024	ENSCPOG00000005152	INTS11	78	67.024	Cavia_porcellus
WBGene00008642	F10B5.8	79	73.810	ENSCCAG00000026348	INTS11	91	73.810	Cebus_capucinus
WBGene00008642	F10B5.8	91	60.250	ENSCATG00000005882	INTS11	80	74.043	Cercocebus_atys
WBGene00008642	F10B5.8	77	67.238	ENSCLAG00000004586	INTS11	78	67.238	Chinchilla_lanigera
WBGene00008642	F10B5.8	81	65.314	ENSCSAG00000000681	INTS11	82	65.314	Chlorocebus_sabaeus
WBGene00008642	F10B5.8	79	54.906	ENSCPBG00000022634	INTS11	77	54.906	Chrysemys_picta_bellii
WBGene00008642	F10B5.8	80	66.870	ENSCING00000002398	-	81	66.870	Ciona_intestinalis
WBGene00008642	F10B5.8	83	65.490	ENSCSAVG00000007312	-	84	65.490	Ciona_savignyi
WBGene00008642	F10B5.8	91	60.072	ENSCANG00000034418	INTS11	78	73.810	Colobus_angolensis_palliatus
WBGene00008642	F10B5.8	91	60.250	ENSCGRG00001013448	Ints11	92	60.250	Cricetulus_griseus_chok1gshd
WBGene00008642	F10B5.8	91	60.250	ENSCGRG00000006961	Ints11	92	60.250	Cricetulus_griseus_crigri
WBGene00008642	F10B5.8	81	65.657	ENSCSEG00000017374	ints11	82	65.657	Cynoglossus_semilaevis
WBGene00008642	F10B5.8	78	64.780	ENSCVAG00000008788	ints11	79	64.780	Cyprinodon_variegatus
WBGene00008642	F10B5.8	77	68.376	ENSDARG00000025212	ints11	100	75.785	Danio_rerio
WBGene00008642	F10B5.8	71	69.977	ENSDNOG00000025863	INTS11	84	69.977	Dasypus_novemcinctus
WBGene00008642	F10B5.8	90	59.528	ENSDORG00000002045	Ints11	92	59.528	Dipodomys_ordii
WBGene00008642	F10B5.8	78	66.316	FBgn0039691	IntS11	78	66.316	Drosophila_melanogaster
WBGene00008642	F10B5.8	79	58.385	ENSETEG00000002094	INTS11	97	58.385	Echinops_telfairi
WBGene00008642	F10B5.8	93	61.336	ENSEBUG00000003190	-	89	70.199	Eptatretus_burgeri
WBGene00008642	F10B5.8	78	66.457	ENSEASG00005014989	INTS11	60	64.719	Equus_asinus_asinus
WBGene00008642	F10B5.8	77	67.094	ENSECAG00000023292	INTS11	55	67.094	Equus_caballus
WBGene00008642	F10B5.8	78	67.227	ENSEEUG00000000838	INTS11	79	67.227	Erinaceus_europaeus
WBGene00008642	F10B5.8	78	67.296	ENSELUG00000004815	ints11	79	67.296	Esox_lucius
WBGene00008642	F10B5.8	81	65.314	ENSFCAG00000007618	INTS11	78	76.190	Felis_catus
WBGene00008642	F10B5.8	77	65.890	ENSFALG00000009231	INTS11	79	65.890	Ficedula_albicollis
WBGene00008642	F10B5.8	91	60.250	ENSFDAG00000009131	INTS11	92	60.250	Fukomys_damarensis
WBGene00008642	F10B5.8	78	67.296	ENSFHEG00000007863	ints11	80	67.296	Fundulus_heteroclitus
WBGene00008642	F10B5.8	78	67.850	ENSGMOG00000006721	ints11	79	67.850	Gadus_morhua
WBGene00008642	F10B5.8	78	68.277	ENSGALG00000001691	INTS11	79	68.277	Gallus_gallus
WBGene00008642	F10B5.8	78	58.635	ENSGAFG00000019948	ints11	80	58.635	Gambusia_affinis
WBGene00008642	F10B5.8	78	67.850	ENSGACG00000011260	ints11	79	67.850	Gasterosteus_aculeatus
WBGene00008642	F10B5.8	78	68.277	ENSGAGG00000015874	INTS11	79	68.277	Gopherus_agassizii
WBGene00008642	F10B5.8	79	73.810	ENSGGOG00000005366	INTS11	91	73.810	Gorilla_gorilla
WBGene00008642	F10B5.8	78	67.505	ENSHBUG00000006820	ints11	79	67.505	Haplochromis_burtoni
WBGene00008642	F10B5.8	90	60.000	ENSHGLG00000017561	INTS11	91	60.000	Heterocephalus_glaber_female
WBGene00008642	F10B5.8	90	60.000	ENSHGLG00100014276	INTS11	91	60.000	Heterocephalus_glaber_male
WBGene00008642	F10B5.8	78	67.505	ENSHCOG00000013135	ints11	79	67.505	Hippocampus_comes
WBGene00008642	F10B5.8	78	67.296	ENSIPUG00000022761	cpsf3l	79	67.296	Ictalurus_punctatus
WBGene00008642	F10B5.8	90	60.036	ENSSTOG00000020019	INTS11	91	60.036	Ictidomys_tridecemlineatus
WBGene00008642	F10B5.8	91	57.398	ENSJJAG00000008717	Ints11	92	57.398	Jaculus_jaculus
WBGene00008642	F10B5.8	78	67.296	ENSKMAG00000003315	ints11	79	67.296	Kryptolebias_marmoratus
WBGene00008642	F10B5.8	78	67.296	ENSLBEG00000011392	ints11	81	67.296	Labrus_bergylta
WBGene00008642	F10B5.8	81	54.217	ENSLACG00000018802	INTS11	82	54.217	Latimeria_chalumnae
WBGene00008642	F10B5.8	71	71.363	ENSLOCG00000002177	ints11	71	71.363	Lepisosteus_oculatus
WBGene00008642	F10B5.8	81	64.837	ENSLAFG00000013687	INTS11	82	64.837	Loxodonta_africana
WBGene00008642	F10B5.8	81	65.517	ENSMFAG00000044583	INTS11	82	74.043	Macaca_fascicularis
WBGene00008642	F10B5.8	91	59.892	ENSMMUG00000013866	INTS11	78	74.449	Macaca_mulatta
WBGene00008642	F10B5.8	91	60.250	ENSMNEG00000030021	INTS11	82	74.043	Macaca_nemestrina
WBGene00008642	F10B5.8	78	74.101	ENSMLEG00000044372	INTS11	89	74.101	Mandrillus_leucophaeus
WBGene00008642	F10B5.8	78	67.505	ENSMAMG00000004522	ints11	79	67.505	Mastacembelus_armatus
WBGene00008642	F10B5.8	78	67.296	ENSMZEG00005023352	ints11	79	67.296	Maylandia_zebra
WBGene00008642	F10B5.8	78	68.277	ENSMGAG00000002879	INTS11	79	68.277	Meleagris_gallopavo
WBGene00008642	F10B5.8	76	67.597	ENSMAUG00000010199	Ints11	78	67.597	Mesocricetus_auratus
WBGene00008642	F10B5.8	91	60.250	ENSMICG00000014186	INTS11	84	74.043	Microcebus_murinus
WBGene00008642	F10B5.8	76	67.597	ENSMOCG00000021304	Ints11	78	67.597	Microtus_ochrogaster
WBGene00008642	F10B5.8	78	59.205	ENSMMOG00000015040	ints11	78	59.205	Mola_mola
WBGene00008642	F10B5.8	81	66.126	ENSMODG00000006290	INTS11	82	66.126	Monodelphis_domestica
WBGene00008642	F10B5.8	78	67.296	ENSMALG00000002210	ints11	79	67.296	Monopterus_albus
WBGene00008642	F10B5.8	91	60.428	MGP_CAROLIEiJ_G0026910	Ints11	92	60.428	Mus_caroli
WBGene00008642	F10B5.8	91	60.428	ENSMUSG00000029034	Ints11	92	60.428	Mus_musculus
WBGene00008642	F10B5.8	76	67.811	MGP_PahariEiJ_G0029259	Ints11	78	67.811	Mus_pahari
WBGene00008642	F10B5.8	91	60.606	MGP_SPRETEiJ_G0027905	Ints11	92	60.606	Mus_spretus
WBGene00008642	F10B5.8	76	64.871	ENSMPUG00000014311	INTS11	81	64.871	Mustela_putorius_furo
WBGene00008642	F10B5.8	91	60.071	ENSNGAG00000010139	Ints11	92	60.071	Nannospalax_galili
WBGene00008642	F10B5.8	78	62.893	ENSNBRG00000002564	ints11	78	62.893	Neolamprologus_brichardi
WBGene00008642	F10B5.8	77	65.953	ENSNLEG00000000053	INTS11	85	73.810	Nomascus_leucogenys
WBGene00008642	F10B5.8	69	70.853	ENSMEUG00000011664	INTS11	75	70.853	Notamacropus_eugenii
WBGene00008642	F10B5.8	77	67.666	ENSODEG00000009761	INTS11	78	67.666	Octodon_degus
WBGene00008642	F10B5.8	78	67.505	ENSONIG00000016600	ints11	79	67.505	Oreochromis_niloticus
WBGene00008642	F10B5.8	78	47.510	ENSOANG00000013023	-	96	46.598	Ornithorhynchus_anatinus
WBGene00008642	F10B5.8	78	67.296	ENSORLG00000015957	ints11	79	67.296	Oryzias_latipes
WBGene00008642	F10B5.8	78	67.296	ENSORLG00020008544	ints11	79	67.296	Oryzias_latipes_hni
WBGene00008642	F10B5.8	78	67.296	ENSORLG00015003381	ints11	79	67.296	Oryzias_latipes_hsok
WBGene00008642	F10B5.8	78	67.296	ENSOMEG00000018159	ints11	80	67.296	Oryzias_melastigma
WBGene00008642	F10B5.8	81	65.385	ENSOGAG00000000463	INTS11	82	65.385	Otolemur_garnettii
WBGene00008642	F10B5.8	70	66.900	ENSOARG00000004725	INTS11	82	66.900	Ovis_aries
WBGene00008642	F10B5.8	79	73.810	ENSPPAG00000037865	INTS11	91	73.810	Pan_paniscus
WBGene00008642	F10B5.8	81	65.314	ENSPPRG00000021402	INTS11	78	76.190	Panthera_pardus
WBGene00008642	F10B5.8	80	65.164	ENSPTIG00000019834	INTS11	70	75.940	Panthera_tigris_altaica
WBGene00008642	F10B5.8	79	73.810	ENSPTRG00000051102	INTS11	91	73.810	Pan_troglodytes
WBGene00008642	F10B5.8	91	60.072	ENSPANG00000019349	INTS11	80	74.043	Papio_anubis
WBGene00008642	F10B5.8	77	69.658	ENSPKIG00000008091	ints11	78	69.658	Paramormyrops_kingsleyae
WBGene00008642	F10B5.8	78	68.487	ENSPSIG00000002824	INTS11	79	68.487	Pelodiscus_sinensis
WBGene00008642	F10B5.8	77	68.376	ENSPMGG00000006430	ints11	78	68.376	Periophthalmus_magnuspinnatus
WBGene00008642	F10B5.8	91	60.142	ENSPEMG00000018526	Ints11	92	60.142	Peromyscus_maniculatus_bairdii
WBGene00008642	F10B5.8	81	66.329	ENSPCIG00000007815	-	82	66.329	Phascolarctos_cinereus
WBGene00008642	F10B5.8	77	68.008	ENSPFOG00000008512	ints11	79	68.008	Poecilia_formosa
WBGene00008642	F10B5.8	78	67.715	ENSPLAG00000019195	ints11	80	67.715	Poecilia_latipinna
WBGene00008642	F10B5.8	78	67.505	ENSPMEG00000018956	ints11	80	67.505	Poecilia_mexicana
WBGene00008642	F10B5.8	78	67.715	ENSPREG00000021516	ints11	80	67.715	Poecilia_reticulata
WBGene00008642	F10B5.8	90	56.498	ENSPPYG00000002013	INTS11	92	56.498	Pongo_abelii
WBGene00008642	F10B5.8	50	75.824	ENSPCAG00000002309	INTS11	51	75.824	Procavia_capensis
WBGene00008642	F10B5.8	91	60.250	ENSPCOG00000016861	INTS11	92	60.250	Propithecus_coquereli
WBGene00008642	F10B5.8	81	65.517	ENSPVAG00000001017	INTS11	82	65.517	Pteropus_vampyrus
WBGene00008642	F10B5.8	78	67.505	ENSPNYG00000021238	ints11	79	67.505	Pundamilia_nyererei
WBGene00008642	F10B5.8	78	67.715	ENSPNAG00000022204	ints11	79	67.715	Pygocentrus_nattereri
WBGene00008642	F10B5.8	91	60.428	ENSRNOG00000019712	Ints11	92	60.428	Rattus_norvegicus
WBGene00008642	F10B5.8	91	60.250	ENSRBIG00000039487	INTS11	78	73.810	Rhinopithecus_bieti
WBGene00008642	F10B5.8	81	65.112	ENSSBOG00000018848	INTS11	78	73.810	Saimiri_boliviensis_boliviensis
WBGene00008642	F10B5.8	78	68.201	ENSSFOG00015020610	cpsf3l	80	68.201	Scleropages_formosus
WBGene00008642	F10B5.8	78	67.505	ENSSMAG00000019579	ints11	80	67.015	Scophthalmus_maximus
WBGene00008642	F10B5.8	78	67.505	ENSSDUG00000003980	ints11	79	67.505	Seriola_dumerili
WBGene00008642	F10B5.8	78	67.505	ENSSLDG00000017198	ints11	81	67.941	Seriola_lalandi_dorsalis
WBGene00008642	F10B5.8	78	68.277	ENSSPUG00000016767	INTS11	76	76.190	Sphenodon_punctatus
WBGene00008642	F10B5.8	78	67.296	ENSSPAG00000018290	ints11	79	67.296	Stegastes_partitus
WBGene00008642	F10B5.8	78	66.247	ENSSSCG00000003339	INTS11	79	66.247	Sus_scrofa
WBGene00008642	F10B5.8	76	67.532	ENSTGUG00000003192	-	78	67.532	Taeniopygia_guttata
WBGene00008642	F10B5.8	78	67.715	ENSTRUG00000005523	ints11	84	75.745	Takifugu_rubripes
WBGene00008642	F10B5.8	78	67.296	ENSTNIG00000012415	ints11	79	67.296	Tetraodon_nigroviridis
WBGene00008642	F10B5.8	70	63.380	ENSTBEG00000005377	INTS11	80	63.380	Tupaia_belangeri
WBGene00008642	F10B5.8	70	57.882	ENSTTRG00000017031	INTS11	71	57.882	Tursiops_truncatus
WBGene00008642	F10B5.8	81	65.112	ENSUAMG00000012804	INTS11	82	65.112	Ursus_americanus
WBGene00008642	F10B5.8	79	65.289	ENSUMAG00000002070	INTS11	80	65.289	Ursus_maritimus
WBGene00008642	F10B5.8	51	63.830	ENSVPAG00000005134	-	66	63.830	Vicugna_pacos
WBGene00008642	F10B5.8	81	65.112	ENSVVUG00000004350	INTS11	82	65.112	Vulpes_vulpes
WBGene00008642	F10B5.8	78	68.908	ENSXETG00000030716	INTS11	79	68.908	Xenopus_tropicalis
WBGene00008642	F10B5.8	78	62.893	ENSXCOG00000015382	ints11	79	62.893	Xiphophorus_couchianus
WBGene00008642	F10B5.8	78	67.505	ENSXMAG00000012456	ints11	80	67.505	Xiphophorus_maculatus