EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00008683 (Gene tree)
Gene ID: -
Gene Symbol: repo-1
Alias: -
Full Name: REversed POlarity in early embryos
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 843 bases
Position: chrIV:12084478-12085320
Accession: Q19335
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F11A10	zf-met	PF12874.7	4.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F11A10.2	-	761	NM_069889	F11A10.2	222 (aa)	NP_502290	Q19335

Gene Model

Click here to download WBGene00008683's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00008683's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00008683	repo-1	99	77.376	ENSG00000104897	SF3A2	100	79.259	Homo_sapiens
WBGene00008683	repo-1	97	79.167	ENSAPOG00000003916	sf3a2	74	78.182	Acanthochromis_polyacanthus
WBGene00008683	repo-1	97	80.556	ENSACIG00000018153	sf3a2	75	79.545	Amphilophus_citrinellus
WBGene00008683	repo-1	99	78.182	ENSAOCG00000015960	sf3a2	74	78.182	Amphiprion_ocellaris
WBGene00008683	repo-1	99	78.182	ENSAPEG00000012336	sf3a2	74	78.182	Amphiprion_percula
WBGene00008683	repo-1	97	79.167	ENSATEG00000015449	sf3a2	74	78.182	Anabas_testudineus
WBGene00008683	repo-1	83	79.459	ENSANAG00000034031	-	89	79.459	Aotus_nancymaae
WBGene00008683	repo-1	97	80.556	ENSACLG00000002356	sf3a2	73	80.556	Astatotilapia_calliptera
WBGene00008683	repo-1	99	79.638	ENSAMXG00000032428	sf3a2	73	79.638	Astyanax_mexicanus
WBGene00008683	repo-1	82	80.769	ENSCAPG00000003402	-	90	80.769	Cavia_aperea
WBGene00008683	repo-1	99	77.376	ENSCCAG00000009812	SF3A2	87	80.000	Cebus_capucinus
WBGene00008683	repo-1	97	78.704	ENSCPBG00000018569	SF3A2	68	78.704	Chrysemys_picta_bellii
WBGene00008683	repo-1	96	78.605	ENSCING00000003319	zf(matrin)-2	62	78.605	Ciona_intestinalis
WBGene00008683	repo-1	96	78.140	ENSCSAVG00000007862	-	57	78.140	Ciona_savignyi
WBGene00008683	repo-1	99	77.376	ENSCGRG00000011089	Sf3a2	96	79.679	Cricetulus_griseus_crigri
WBGene00008683	repo-1	97	79.630	ENSCSEG00000014308	sf3a2	76	79.630	Cynoglossus_semilaevis
WBGene00008683	repo-1	99	79.091	ENSCVAG00000021349	sf3a2	75	79.091	Cyprinodon_variegatus
WBGene00008683	repo-1	97	80.093	ENSDARG00000021107	sf3a2	78	80.093	Danio_rerio
WBGene00008683	repo-1	96	79.630	FBgn0036314	Sf3a2	82	79.630	Drosophila_melanogaster
WBGene00008683	repo-1	97	80.093	ENSELUG00000008471	sf3a2	71	80.093	Esox_lucius
WBGene00008683	repo-1	99	76.923	ENSFCAG00000030476	SF3A2	50	76.923	Felis_catus
WBGene00008683	repo-1	82	80.769	ENSFDAG00000020911	-	93	80.769	Fukomys_damarensis
WBGene00008683	repo-1	97	80.556	ENSFHEG00000002392	sf3a2	74	80.556	Fundulus_heteroclitus
WBGene00008683	repo-1	97	79.167	ENSGMOG00000012186	sf3a2	73	78.182	Gadus_morhua
WBGene00008683	repo-1	97	79.167	ENSGALG00000021679	SF3A2	70	77.828	Gallus_gallus
WBGene00008683	repo-1	99	79.545	ENSGAFG00000008478	sf3a2	75	79.545	Gambusia_affinis
WBGene00008683	repo-1	97	79.167	ENSGACG00000015255	sf3a2	75	78.182	Gasterosteus_aculeatus
WBGene00008683	repo-1	76	78.824	ENSGAGG00000008500	SF3A2	63	78.824	Gopherus_agassizii
WBGene00008683	repo-1	97	80.556	ENSHBUG00000021796	sf3a2	73	80.556	Haplochromis_burtoni
WBGene00008683	repo-1	99	77.376	ENSHGLG00000015102	SF3A2	88	80.328	Heterocephalus_glaber_female
WBGene00008683	repo-1	99	77.376	ENSHGLG00100000418	SF3A2	88	80.328	Heterocephalus_glaber_male
WBGene00008683	repo-1	97	78.704	ENSHCOG00000001223	sf3a2	74	78.704	Hippocampus_comes
WBGene00008683	repo-1	99	79.186	ENSIPUG00000019071	sf3a2	74	79.186	Ictalurus_punctatus
WBGene00008683	repo-1	99	77.376	ENSSTOG00000007495	SF3A2	90	75.000	Ictidomys_tridecemlineatus
WBGene00008683	repo-1	99	77.376	ENSJJAG00000010635	Sf3a2	94	80.769	Jaculus_jaculus
WBGene00008683	repo-1	99	79.545	ENSKMAG00000006295	sf3a2	74	79.545	Kryptolebias_marmoratus
WBGene00008683	repo-1	99	78.182	ENSLBEG00000000677	sf3a2	74	78.182	Labrus_bergylta
WBGene00008683	repo-1	97	79.167	ENSLACG00000008744	SF3A2	71	77.828	Latimeria_chalumnae
WBGene00008683	repo-1	97	79.263	ENSLOCG00000005835	sf3a2	70	79.263	Lepisosteus_oculatus
WBGene00008683	repo-1	97	79.167	ENSMAMG00000009881	sf3a2	73	79.167	Mastacembelus_armatus
WBGene00008683	repo-1	97	80.556	ENSMZEG00005025609	sf3a2	73	80.556	Maylandia_zebra
WBGene00008683	repo-1	97	79.167	ENSMGAG00000001950	SF3A2	70	77.828	Meleagris_gallopavo
WBGene00008683	repo-1	83	79.679	ENSMAUG00000005644	-	96	79.679	Mesocricetus_auratus
WBGene00008683	repo-1	97	70.968	ENSMMOG00000010657	sf3a2	77	70.968	Mola_mola
WBGene00008683	repo-1	97	79.630	ENSMALG00000020442	sf3a2	74	78.636	Monopterus_albus
WBGene00008683	repo-1	99	77.376	MGP_CAROLIEiJ_G0015602	-	94	80.769	Mus_caroli
WBGene00008683	repo-1	99	77.376	ENSMUSG00000020211	Sf3a2	94	80.769	Mus_musculus
WBGene00008683	repo-1	99	77.376	MGP_PahariEiJ_G0031015	-	94	80.769	Mus_pahari
WBGene00008683	repo-1	99	77.376	MGP_SPRETEiJ_G0016420	-	94	80.769	Mus_spretus
WBGene00008683	repo-1	99	77.828	ENSMLUG00000004426	-	50	77.828	Myotis_lucifugus
WBGene00008683	repo-1	82	81.319	ENSNGAG00000023309	-	94	81.319	Nannospalax_galili
WBGene00008683	repo-1	97	80.556	ENSNBRG00000019872	sf3a2	73	80.556	Neolamprologus_brichardi
WBGene00008683	repo-1	84	79.144	ENSODEG00000013722	-	100	79.144	Octodon_degus
WBGene00008683	repo-1	97	80.556	ENSONIG00000010198	sf3a2	73	80.556	Oreochromis_niloticus
WBGene00008683	repo-1	92	78.641	ENSOANG00000013649	-	98	78.641	Ornithorhynchus_anatinus
WBGene00008683	repo-1	99	79.545	ENSORLG00000015301	sf3a2	76	79.545	Oryzias_latipes
WBGene00008683	repo-1	99	79.545	ENSORLG00020017235	sf3a2	76	79.545	Oryzias_latipes_hni
WBGene00008683	repo-1	99	79.545	ENSORLG00015017116	sf3a2	76	79.545	Oryzias_latipes_hsok
WBGene00008683	repo-1	99	78.636	ENSOMEG00000020860	sf3a2	76	78.636	Oryzias_melastigma
WBGene00008683	repo-1	99	77.376	ENSOARG00000014357	SF3A2	54	77.376	Ovis_aries
WBGene00008683	repo-1	97	79.630	ENSPKIG00000009487	sf3a2	68	79.630	Paramormyrops_kingsleyae
WBGene00008683	repo-1	97	77.982	ENSPSIG00000010839	SF3A2	69	77.982	Pelodiscus_sinensis
WBGene00008683	repo-1	97	79.630	ENSPMGG00000017249	sf3a2	80	80.097	Periophthalmus_magnuspinnatus
WBGene00008683	repo-1	99	79.545	ENSPFOG00000015945	sf3a2	75	79.638	Poecilia_formosa
WBGene00008683	repo-1	99	79.545	ENSPLAG00000010052	sf3a2	75	79.638	Poecilia_latipinna
WBGene00008683	repo-1	99	79.545	ENSPMEG00000000184	sf3a2	75	79.638	Poecilia_mexicana
WBGene00008683	repo-1	99	79.545	ENSPREG00000017808	sf3a2	75	79.638	Poecilia_reticulata
WBGene00008683	repo-1	97	80.556	ENSPNYG00000006928	sf3a2	73	80.556	Pundamilia_nyererei
WBGene00008683	repo-1	99	79.638	ENSPNAG00000027582	sf3a2	73	79.638	Pygocentrus_nattereri
WBGene00008683	repo-1	86	70.312	ENSSHAG00000011646	-	70	69.036	Sarcophilus_harrisii
WBGene00008683	repo-1	97	78.241	ENSSHAG00000011677	-	89	76.923	Sarcophilus_harrisii
WBGene00008683	repo-1	97	80.093	ENSSFOG00015010920	sf3a2	62	80.093	Scleropages_formosus
WBGene00008683	repo-1	97	78.704	ENSSMAG00000002629	sf3a2	76	77.727	Scophthalmus_maximus
WBGene00008683	repo-1	97	79.630	ENSSDUG00000015810	sf3a2	75	78.636	Seriola_dumerili
WBGene00008683	repo-1	97	79.630	ENSSLDG00000010874	sf3a2	75	78.636	Seriola_lalandi_dorsalis
WBGene00008683	repo-1	97	79.167	ENSSPAG00000004960	sf3a2	73	79.167	Stegastes_partitus
WBGene00008683	repo-1	92	80.000	ENSTGUG00000000305	SF3A2	100	80.000	Taeniopygia_guttata
WBGene00008683	repo-1	97	79.167	ENSTRUG00000009045	sf3a2	75	79.167	Takifugu_rubripes
WBGene00008683	repo-1	97	78.802	ENSTNIG00000015318	sf3a2	75	78.802	Tetraodon_nigroviridis
WBGene00008683	repo-1	99	78.281	ENSXETG00000024943	sf3a2	54	78.281	Xenopus_tropicalis
WBGene00008683	repo-1	99	79.545	ENSXCOG00000008222	sf3a2	75	79.545	Xiphophorus_couchianus
WBGene00008683	repo-1	99	79.545	ENSXMAG00000029068	sf3a2	75	79.545	Xiphophorus_maculatus