EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00009012 (Gene tree)
Gene ID: -
Gene Symbol: F21D5.7
Alias: -
Full Name: Signal recognition particle 54 kDa protein
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 2322 bases
Position: chrIV:8741383-8743704
Accession: G5EE80
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F21D5	SRP54	PF00448.22	3.3e-76	1	1
F21D5	SRP54_N	PF02881.19	5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F21D5.7	-	1903	NM_069106	F21D5.7	496 (aa)	NP_501507	G5EE80

Gene Model

Click here to download WBGene00009012's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00009012's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00009012	F21D5.7	100	71.687	ENSG00000100883	SRP54	98	72.581	Homo_sapiens
WBGene00009012	F21D5.7	100	72.892	ENSAPOG00000011314	srp54	98	72.892	Acanthochromis_polyacanthus
WBGene00009012	F21D5.7	100	71.687	ENSAMEG00000015544	SRP54	98	71.687	Ailuropoda_melanoleuca
WBGene00009012	F21D5.7	91	73.051	ENSACIG00000022831	srp54	97	73.051	Amphilophus_citrinellus
WBGene00009012	F21D5.7	100	72.892	ENSAOCG00000019401	srp54	98	72.892	Amphiprion_ocellaris
WBGene00009012	F21D5.7	100	72.892	ENSAPEG00000001977	srp54	98	73.932	Amphiprion_percula
WBGene00009012	F21D5.7	100	72.892	ENSATEG00000013877	srp54	98	72.892	Anabas_testudineus
WBGene00009012	F21D5.7	96	71.908	ENSAPLG00000010125	SRP54	95	71.908	Anas_platyrhynchos
WBGene00009012	F21D5.7	86	71.663	ENSACAG00000010631	-	98	71.663	Anolis_carolinensis
WBGene00009012	F21D5.7	63	59.683	ENSACAG00000001124	-	93	59.683	Anolis_carolinensis
WBGene00009012	F21D5.7	100	71.084	ENSACAG00000002103	-	98	71.084	Anolis_carolinensis
WBGene00009012	F21D5.7	100	71.687	ENSANAG00000022133	SRP54	98	71.687	Aotus_nancymaae
WBGene00009012	F21D5.7	100	72.691	ENSACLG00000015866	srp54	98	72.691	Astatotilapia_calliptera
WBGene00009012	F21D5.7	100	73.092	ENSAMXG00000032669	SRP54	98	73.092	Astyanax_mexicanus
WBGene00009012	F21D5.7	100	71.687	ENSBTAG00000019085	SRP54	98	71.687	Bos_taurus
WBGene00009012	F21D5.7	100	71.687	ENSCJAG00000006581	SRP54	98	71.687	Callithrix_jacchus
WBGene00009012	F21D5.7	100	71.687	ENSCAFG00000013331	SRP54	98	71.687	Canis_familiaris
WBGene00009012	F21D5.7	100	71.687	ENSCAFG00020023427	SRP54	98	71.687	Canis_lupus_dingo
WBGene00009012	F21D5.7	100	71.687	ENSCHIG00000026345	SRP54	98	71.687	Capra_hircus
WBGene00009012	F21D5.7	96	63.808	ENSTSYG00000035333	-	93	63.808	Carlito_syrichta
WBGene00009012	F21D5.7	100	71.486	ENSTSYG00000002680	-	98	71.486	Carlito_syrichta
WBGene00009012	F21D5.7	96	47.273	ENSCAPG00000008780	SRP54	100	47.273	Cavia_aperea
WBGene00009012	F21D5.7	100	71.486	ENSCPOG00000003691	SRP54	98	71.486	Cavia_porcellus
WBGene00009012	F21D5.7	86	72.131	ENSCCAG00000024179	SRP54	98	73.608	Cebus_capucinus
WBGene00009012	F21D5.7	100	71.687	ENSCATG00000034083	SRP54	98	71.687	Cercocebus_atys
WBGene00009012	F21D5.7	100	71.687	ENSCLAG00000015076	SRP54	98	71.687	Chinchilla_lanigera
WBGene00009012	F21D5.7	100	71.687	ENSCSAG00000015575	SRP54	98	71.687	Chlorocebus_sabaeus
WBGene00009012	F21D5.7	98	63.223	ENSCHOG00000008986	SRP54	100	63.223	Choloepus_hoffmanni
WBGene00009012	F21D5.7	100	71.687	ENSCPBG00000026195	SRP54	98	71.687	Chrysemys_picta_bellii
WBGene00009012	F21D5.7	99	72.065	ENSCING00000007380	-	98	72.065	Ciona_intestinalis
WBGene00009012	F21D5.7	100	71.687	ENSCANG00000028532	SRP54	98	71.687	Colobus_angolensis_palliatus
WBGene00009012	F21D5.7	100	71.687	ENSCGRG00001009525	-	98	71.687	Cricetulus_griseus_chok1gshd
WBGene00009012	F21D5.7	78	76.104	ENSCGRG00000009453	-	89	76.104	Cricetulus_griseus_crigri
WBGene00009012	F21D5.7	100	72.490	ENSCSEG00000012392	srp54	98	72.490	Cynoglossus_semilaevis
WBGene00009012	F21D5.7	100	73.092	ENSCVAG00000010395	srp54	98	73.092	Cyprinodon_variegatus
WBGene00009012	F21D5.7	100	73.092	ENSDARG00000098367	srp54	98	73.092	Danio_rerio
WBGene00009012	F21D5.7	100	71.687	ENSDNOG00000032525	SRP54	98	71.687	Dasypus_novemcinctus
WBGene00009012	F21D5.7	90	62.697	ENSDORG00000005159	-	96	62.697	Dipodomys_ordii
WBGene00009012	F21D5.7	98	69.877	FBgn0010747	Srp54k	96	69.796	Drosophila_melanogaster
WBGene00009012	F21D5.7	81	43.890	ENSETEG00000012102	-	96	43.890	Echinops_telfairi
WBGene00009012	F21D5.7	100	71.285	ENSETEG00000016307	-	98	71.285	Echinops_telfairi
WBGene00009012	F21D5.7	99	71.779	ENSEBUG00000009437	-	96	71.779	Eptatretus_burgeri
WBGene00009012	F21D5.7	100	71.687	ENSEASG00005002057	SRP54	98	71.687	Equus_asinus_asinus
WBGene00009012	F21D5.7	100	71.687	ENSECAG00000018042	SRP54	98	71.687	Equus_caballus
WBGene00009012	F21D5.7	100	59.036	ENSEEUG00000001511	SRP54	98	59.036	Erinaceus_europaeus
WBGene00009012	F21D5.7	100	73.092	ENSELUG00000003395	srp54	98	73.092	Esox_lucius
WBGene00009012	F21D5.7	100	71.486	ENSFCAG00000032033	SRP54	98	71.486	Felis_catus
WBGene00009012	F21D5.7	100	71.285	ENSFALG00000005995	SRP54	98	71.285	Ficedula_albicollis
WBGene00009012	F21D5.7	100	71.687	ENSFDAG00000016767	SRP54	98	72.393	Fukomys_damarensis
WBGene00009012	F21D5.7	100	72.691	ENSFHEG00000004263	srp54	98	72.691	Fundulus_heteroclitus
WBGene00009012	F21D5.7	95	68.577	ENSGMOG00000011391	srp54	98	68.577	Gadus_morhua
WBGene00009012	F21D5.7	100	71.285	ENSGALG00000023135	SRP54	98	71.285	Gallus_gallus
WBGene00009012	F21D5.7	100	73.092	ENSGAFG00000011586	srp54	98	73.092	Gambusia_affinis
WBGene00009012	F21D5.7	100	72.490	ENSGACG00000004181	srp54	100	73.502	Gasterosteus_aculeatus
WBGene00009012	F21D5.7	100	71.687	ENSGAGG00000014766	SRP54	98	71.687	Gopherus_agassizii
WBGene00009012	F21D5.7	100	71.687	ENSGGOG00000002926	SRP54	98	71.687	Gorilla_gorilla
WBGene00009012	F21D5.7	100	72.691	ENSHBUG00000005678	srp54	98	72.691	Haplochromis_burtoni
WBGene00009012	F21D5.7	100	71.687	ENSHGLG00000002850	SRP54	98	71.687	Heterocephalus_glaber_female
WBGene00009012	F21D5.7	100	49.499	ENSHGLG00100007281	-	98	49.499	Heterocephalus_glaber_male
WBGene00009012	F21D5.7	100	71.687	ENSHGLG00100005263	SRP54	98	71.687	Heterocephalus_glaber_male
WBGene00009012	F21D5.7	100	72.088	ENSHCOG00000021127	srp54	98	72.088	Hippocampus_comes
WBGene00009012	F21D5.7	100	73.293	ENSIPUG00000001420	srp54	98	73.293	Ictalurus_punctatus
WBGene00009012	F21D5.7	100	71.687	ENSSTOG00000016023	SRP54	98	71.687	Ictidomys_tridecemlineatus
WBGene00009012	F21D5.7	100	66.667	ENSJJAG00000013417	-	98	66.667	Jaculus_jaculus
WBGene00009012	F21D5.7	86	58.237	ENSJJAG00000016404	-	97	58.237	Jaculus_jaculus
WBGene00009012	F21D5.7	100	73.293	ENSKMAG00000007707	srp54	98	73.293	Kryptolebias_marmoratus
WBGene00009012	F21D5.7	100	72.892	ENSLBEG00000018690	srp54	98	72.892	Labrus_bergylta
WBGene00009012	F21D5.7	100	72.892	ENSLBEG00000021122	srp54	98	72.892	Labrus_bergylta
WBGene00009012	F21D5.7	100	72.088	ENSLACG00000017890	SRP54	98	72.088	Latimeria_chalumnae
WBGene00009012	F21D5.7	100	72.892	ENSLOCG00000009440	srp54	98	72.892	Lepisosteus_oculatus
WBGene00009012	F21D5.7	100	71.687	ENSLAFG00000012007	SRP54	98	71.687	Loxodonta_africana
WBGene00009012	F21D5.7	100	71.687	ENSMFAG00000044371	SRP54	98	71.687	Macaca_fascicularis
WBGene00009012	F21D5.7	100	71.687	ENSMMUG00000015073	FAM177A1	98	71.687	Macaca_mulatta
WBGene00009012	F21D5.7	100	71.687	ENSMNEG00000006947	SRP54	98	71.687	Macaca_nemestrina
WBGene00009012	F21D5.7	100	71.687	ENSMLEG00000042251	SRP54	98	71.687	Mandrillus_leucophaeus
WBGene00009012	F21D5.7	100	72.691	ENSMAMG00000004803	srp54	98	72.691	Mastacembelus_armatus
WBGene00009012	F21D5.7	100	72.691	ENSMZEG00005027528	srp54	98	72.691	Maylandia_zebra
WBGene00009012	F21D5.7	100	68.600	ENSMGAG00000012481	SRP54	98	68.600	Meleagris_gallopavo
WBGene00009012	F21D5.7	100	71.888	ENSMAUG00000014447	-	98	71.888	Mesocricetus_auratus
WBGene00009012	F21D5.7	100	71.687	ENSMICG00000010270	SRP54	98	71.687	Microcebus_murinus
WBGene00009012	F21D5.7	87	72.811	ENSMOCG00000000948	-	98	72.811	Microtus_ochrogaster
WBGene00009012	F21D5.7	91	72.000	ENSMMOG00000020303	srp54	98	72.000	Mola_mola
WBGene00009012	F21D5.7	100	71.687	ENSMODG00000023150	-	98	71.687	Monodelphis_domestica
WBGene00009012	F21D5.7	100	71.687	ENSMODG00000012925	-	98	71.687	Monodelphis_domestica
WBGene00009012	F21D5.7	90	73.874	ENSMALG00000009163	srp54	98	73.874	Monopterus_albus
WBGene00009012	F21D5.7	100	71.888	MGP_CAROLIEiJ_G0017754	-	98	71.888	Mus_caroli
WBGene00009012	F21D5.7	100	71.888	ENSMUSG00000112449	Srp54b	98	71.888	Mus_musculus
WBGene00009012	F21D5.7	100	71.687	ENSMUSG00000079108	Srp54c	98	71.687	Mus_musculus
WBGene00009012	F21D5.7	100	71.888	ENSMUSG00000073079	Srp54a	98	71.888	Mus_musculus
WBGene00009012	F21D5.7	100	71.888	MGP_PahariEiJ_G0029510	-	98	71.888	Mus_pahari
WBGene00009012	F21D5.7	100	71.687	ENSMPUG00000016302	SRP54	98	71.687	Mustela_putorius_furo
WBGene00009012	F21D5.7	100	71.285	ENSMLUG00000008958	SRP54	98	71.285	Myotis_lucifugus
WBGene00009012	F21D5.7	100	63.454	ENSNGAG00000019806	-	98	63.454	Nannospalax_galili
WBGene00009012	F21D5.7	87	73.963	ENSNBRG00000006000	srp54	98	73.963	Neolamprologus_brichardi
WBGene00009012	F21D5.7	100	71.687	ENSNLEG00000003496	SRP54	98	71.687	Nomascus_leucogenys
WBGene00009012	F21D5.7	68	72.043	ENSMEUG00000000138	-	76	72.043	Notamacropus_eugenii
WBGene00009012	F21D5.7	56	80.556	ENSOPRG00000014502	-	58	80.556	Ochotona_princeps
WBGene00009012	F21D5.7	100	71.687	ENSODEG00000004865	SRP54	98	71.687	Octodon_degus
WBGene00009012	F21D5.7	100	72.691	ENSONIG00000011768	srp54	98	72.691	Oreochromis_niloticus
WBGene00009012	F21D5.7	100	71.687	ENSOANG00000014051	SRP54	98	71.687	Ornithorhynchus_anatinus
WBGene00009012	F21D5.7	100	71.285	ENSOCUG00000007838	SRP54	98	71.285	Oryctolagus_cuniculus
WBGene00009012	F21D5.7	100	72.691	ENSORLG00000010027	srp54	98	72.691	Oryzias_latipes
WBGene00009012	F21D5.7	100	72.691	ENSORLG00020001878	srp54	98	72.691	Oryzias_latipes_hni
WBGene00009012	F21D5.7	100	72.691	ENSORLG00015021866	srp54	98	72.691	Oryzias_latipes_hsok
WBGene00009012	F21D5.7	100	72.490	ENSOMEG00000020952	srp54	98	72.490	Oryzias_melastigma
WBGene00009012	F21D5.7	100	71.687	ENSOGAG00000012188	SRP54	98	71.687	Otolemur_garnettii
WBGene00009012	F21D5.7	100	71.687	ENSOARG00000007160	SRP54	98	71.687	Ovis_aries
WBGene00009012	F21D5.7	100	71.687	ENSPPAG00000017434	SRP54	98	71.687	Pan_paniscus
WBGene00009012	F21D5.7	100	70.884	ENSPPRG00000014047	SRP54	98	70.884	Panthera_pardus
WBGene00009012	F21D5.7	100	71.486	ENSPTIG00000000744	SRP54	94	71.486	Panthera_tigris_altaica
WBGene00009012	F21D5.7	100	71.687	ENSPTRG00000006259	FAM177A1	98	71.687	Pan_troglodytes
WBGene00009012	F21D5.7	100	71.687	ENSPANG00000023853	SRP54	98	71.687	Papio_anubis
WBGene00009012	F21D5.7	100	73.293	ENSPKIG00000001953	srp54	98	73.293	Paramormyrops_kingsleyae
WBGene00009012	F21D5.7	100	71.486	ENSPSIG00000006476	SRP54	98	71.486	Pelodiscus_sinensis
WBGene00009012	F21D5.7	93	72.174	ENSPMGG00000004127	srp54	99	72.174	Periophthalmus_magnuspinnatus
WBGene00009012	F21D5.7	100	62.651	ENSPEMG00000019634	-	100	75.309	Peromyscus_maniculatus_bairdii
WBGene00009012	F21D5.7	99	73.211	ENSPMAG00000006078	-	96	73.211	Petromyzon_marinus
WBGene00009012	F21D5.7	100	71.687	ENSPCIG00000016175	SRP54	98	71.687	Phascolarctos_cinereus
WBGene00009012	F21D5.7	100	73.092	ENSPFOG00000008870	srp54	98	73.092	Poecilia_formosa
WBGene00009012	F21D5.7	100	73.092	ENSPLAG00000009889	srp54	98	73.092	Poecilia_latipinna
WBGene00009012	F21D5.7	100	73.092	ENSPMEG00000008601	srp54	98	73.092	Poecilia_mexicana
WBGene00009012	F21D5.7	100	73.092	ENSPREG00000004505	srp54	98	73.092	Poecilia_reticulata
WBGene00009012	F21D5.7	100	69.076	ENSPPYG00000005739	SRP54	98	69.076	Pongo_abelii
WBGene00009012	F21D5.7	100	68.675	ENSPCAG00000006268	SRP54	98	68.675	Procavia_capensis
WBGene00009012	F21D5.7	100	70.341	ENSPCOG00000022473	SRP54	98	70.341	Propithecus_coquereli
WBGene00009012	F21D5.7	64	76.682	ENSPVAG00000010056	SRP54	82	76.682	Pteropus_vampyrus
WBGene00009012	F21D5.7	100	72.691	ENSPNYG00000009717	srp54	98	72.691	Pundamilia_nyererei
WBGene00009012	F21D5.7	100	73.293	ENSPNAG00000008544	srp54	98	73.293	Pygocentrus_nattereri
WBGene00009012	F21D5.7	100	71.687	ENSRNOG00000032776	Srp54a	98	71.687	Rattus_norvegicus
WBGene00009012	F21D5.7	100	71.687	ENSRROG00000041292	SRP54	98	71.687	Rhinopithecus_roxellana
WBGene00009012	F21D5.7	85	50.926	YPR088C	SRP54	79	50.926	Saccharomyces_cerevisiae
WBGene00009012	F21D5.7	94	72.650	ENSSBOG00000035145	SRP54	98	72.650	Saimiri_boliviensis_boliviensis
WBGene00009012	F21D5.7	68	70.030	ENSSHAG00000000671	SRP54	97	70.030	Sarcophilus_harrisii
WBGene00009012	F21D5.7	100	73.293	ENSSFOG00015013920	srp54	98	73.293	Scleropages_formosus
WBGene00009012	F21D5.7	100	68.750	ENSSMAG00000002441	srp54	98	68.750	Scophthalmus_maximus
WBGene00009012	F21D5.7	100	72.490	ENSSDUG00000018586	srp54	98	72.490	Seriola_dumerili
WBGene00009012	F21D5.7	100	72.691	ENSSLDG00000010476	srp54	98	72.691	Seriola_lalandi_dorsalis
WBGene00009012	F21D5.7	100	71.687	ENSSARG00000002744	SRP54	98	71.687	Sorex_araneus
WBGene00009012	F21D5.7	100	71.687	ENSSPUG00000013101	SRP54	98	71.687	Sphenodon_punctatus
WBGene00009012	F21D5.7	100	72.892	ENSSPAG00000002354	srp54	98	72.892	Stegastes_partitus
WBGene00009012	F21D5.7	100	71.687	ENSSSCG00000001955	SRP54	98	71.687	Sus_scrofa
WBGene00009012	F21D5.7	96	71.908	ENSTGUG00000011945	-	95	71.908	Taeniopygia_guttata
WBGene00009012	F21D5.7	100	72.691	ENSTRUG00000007057	srp54	98	72.691	Takifugu_rubripes
WBGene00009012	F21D5.7	100	72.490	ENSTNIG00000002589	srp54	98	72.490	Tetraodon_nigroviridis
WBGene00009012	F21D5.7	88	66.136	ENSTBEG00000011409	SRP54	98	66.136	Tupaia_belangeri
WBGene00009012	F21D5.7	100	63.454	ENSTTRG00000000928	SRP54	98	63.454	Tursiops_truncatus
WBGene00009012	F21D5.7	53	77.481	ENSUAMG00000012385	SRP54	100	77.481	Ursus_americanus
WBGene00009012	F21D5.7	100	71.687	ENSUMAG00000011234	SRP54	98	71.687	Ursus_maritimus
WBGene00009012	F21D5.7	96	72.117	ENSVPAG00000005668	SRP54	100	72.117	Vicugna_pacos
WBGene00009012	F21D5.7	100	71.687	ENSVVUG00000019962	SRP54	98	71.687	Vulpes_vulpes
WBGene00009012	F21D5.7	100	62.055	ENSXETG00000012290	srp54	98	62.083	Xenopus_tropicalis
WBGene00009012	F21D5.7	89	74.266	ENSXCOG00000004658	srp54	96	74.266	Xiphophorus_couchianus
WBGene00009012	F21D5.7	100	73.092	ENSXMAG00000018315	srp54	98	73.092	Xiphophorus_maculatus