EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00009084 (Gene tree)
Gene ID: -
Gene Symbol: F23B12.7
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: confidence
Strand: Plus strand
Length: 3275 bases
Position: chrV:14449697-14452971
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F23B12	CBF	PF03914.17	2.4e-34	1	1
F23B12	CBF	PF03914.17	2.4e-34	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F23B12.7.2	-	2966	NM_074180	F23B12.7.2	953 (aa)	NP_506581	Q19753
F23B12.7.1	-	2981	NM_074180	F23B12.7.1	953 (aa)	NP_506581	Q19753

Gene Model

Click here to download WBGene00009084's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00009084's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00009084	F23B12.7	81	34.518	ENSG00000115816	CEBPZ	64	34.335	Homo_sapiens
WBGene00009084	F23B12.7	75	33.010	ENSAPOG00000010013	cebpz	64	33.015	Acanthochromis_polyacanthus
WBGene00009084	F23B12.7	86	33.019	ENSAMEG00000017580	CEBPZ	63	34.708	Ailuropoda_melanoleuca
WBGene00009084	F23B12.7	74	32.636	ENSACIG00000014854	cebpz	70	32.421	Amphilophus_citrinellus
WBGene00009084	F23B12.7	87	32.512	ENSAOCG00000007301	cebpz	64	33.014	Amphiprion_ocellaris
WBGene00009084	F23B12.7	75	33.882	ENSAPEG00000014644	cebpz	64	33.151	Amphiprion_percula
WBGene00009084	F23B12.7	68	34.663	ENSATEG00000001538	cebpz	61	34.901	Anabas_testudineus
WBGene00009084	F23B12.7	76	33.786	ENSAPLG00000014239	CEBPZ	71	33.832	Anas_platyrhynchos
WBGene00009084	F23B12.7	87	34.320	ENSACAG00000001411	CEBPZ	74	34.108	Anolis_carolinensis
WBGene00009084	F23B12.7	78	33.822	ENSANAG00000030775	CEBPZ	64	34.192	Aotus_nancymaae
WBGene00009084	F23B12.7	77	32.293	ENSACLG00000006896	cebpz	64	32.917	Astatotilapia_calliptera
WBGene00009084	F23B12.7	71	35.095	ENSAMXG00000018270	cebpz	71	33.375	Astyanax_mexicanus
WBGene00009084	F23B12.7	68	35.909	ENSBTAG00000039770	CEBPZ	60	34.855	Bos_taurus
WBGene00009084	F23B12.7	78	33.955	ENSCJAG00000003858	CEBPZ	71	33.156	Callithrix_jacchus
WBGene00009084	F23B12.7	86	32.825	ENSCAFG00000006085	CEBPZ	64	34.143	Canis_familiaris
WBGene00009084	F23B12.7	86	32.820	ENSCAFG00020022832	CEBPZ	64	34.049	Canis_lupus_dingo
WBGene00009084	F23B12.7	73	34.094	ENSCHIG00000020789	CEBPZ	60	34.909	Capra_hircus
WBGene00009084	F23B12.7	91	32.854	ENSTSYG00000005691	CEBPZ	72	32.870	Carlito_syrichta
WBGene00009084	F23B12.7	90	30.543	ENSCAPG00000017127	CEBPZ	64	32.335	Cavia_aperea
WBGene00009084	F23B12.7	90	32.658	ENSCPOG00000020778	CEBPZ	71	33.376	Cavia_porcellus
WBGene00009084	F23B12.7	75	34.160	ENSCCAG00000036968	CEBPZ	67	33.424	Cebus_capucinus
WBGene00009084	F23B12.7	89	32.755	ENSCATG00000030450	CEBPZ	67	33.514	Cercocebus_atys
WBGene00009084	F23B12.7	93	33.121	ENSCLAG00000009453	CEBPZ	74	33.292	Chinchilla_lanigera
WBGene00009084	F23B12.7	89	32.908	ENSCSAG00000012188	CEBPZ	67	33.514	Chlorocebus_sabaeus
WBGene00009084	F23B12.7	90	32.872	ENSCPBG00000023684	CEBPZ	71	33.631	Chrysemys_picta_bellii
WBGene00009084	F23B12.7	89	32.288	ENSCANG00000033300	CEBPZ	67	33.379	Colobus_angolensis_palliatus
WBGene00009084	F23B12.7	86	33.846	ENSCGRG00001024288	Cebpz	72	33.376	Cricetulus_griseus_chok1gshd
WBGene00009084	F23B12.7	86	33.846	ENSCGRG00000014269	Cebpz	72	33.376	Cricetulus_griseus_crigri
WBGene00009084	F23B12.7	70	34.575	ENSCSEG00000005661	cebpz	64	33.770	Cynoglossus_semilaevis
WBGene00009084	F23B12.7	66	33.124	ENSCVAG00000018541	cebpz	64	32.808	Cyprinodon_variegatus
WBGene00009084	F23B12.7	54	34.608	ENSDARG00000045857	cebpz	75	34.841	Danio_rerio
WBGene00009084	F23B12.7	77	34.538	ENSDNOG00000002209	CEBPZ	60	34.802	Dasypus_novemcinctus
WBGene00009084	F23B12.7	77	32.932	ENSDORG00000027348	Cebpz	68	32.617	Dipodomys_ordii
WBGene00009084	F23B12.7	74	30.556	FBgn0036124	CG7839	63	30.859	Drosophila_melanogaster
WBGene00009084	F23B12.7	73	32.673	ENSETEG00000002400	CEBPZ	69	33.149	Echinops_telfairi
WBGene00009084	F23B12.7	72	32.432	ENSEBUG00000015764	cebpz	73	31.849	Eptatretus_burgeri
WBGene00009084	F23B12.7	92	32.521	ENSEASG00005007345	CEBPZ	72	33.082	Equus_asinus_asinus
WBGene00009084	F23B12.7	93	31.557	ENSECAG00000018957	CEBPZ	71	32.494	Equus_caballus
WBGene00009084	F23B12.7	80	32.567	ENSELUG00000015123	cebpz	62	34.153	Esox_lucius
WBGene00009084	F23B12.7	81	33.037	ENSFCAG00000015764	CEBPZ	73	32.700	Felis_catus
WBGene00009084	F23B12.7	78	34.921	ENSFALG00000011758	CEBPZ	72	33.375	Ficedula_albicollis
WBGene00009084	F23B12.7	86	33.570	ENSFDAG00000002926	CEBPZ	71	32.950	Fukomys_damarensis
WBGene00009084	F23B12.7	75	32.920	ENSFHEG00000012867	cebpz	73	33.243	Fundulus_heteroclitus
WBGene00009084	F23B12.7	68	34.615	ENSGMOG00000017880	cebpz	75	31.282	Gadus_morhua
WBGene00009084	F23B12.7	86	31.977	ENSGALG00000040335	CEBPZ	66	33.243	Gallus_gallus
WBGene00009084	F23B12.7	79	33.420	ENSGACG00000011855	cebpz	71	33.703	Gasterosteus_aculeatus
WBGene00009084	F23B12.7	85	33.373	ENSGAGG00000024100	CEBPZ	77	33.811	Gopherus_agassizii
WBGene00009084	F23B12.7	86	33.175	ENSGGOG00000011349	CEBPZ	68	34.335	Gorilla_gorilla
WBGene00009084	F23B12.7	87	31.623	ENSHBUG00000004917	cebpz	71	31.886	Haplochromis_burtoni
WBGene00009084	F23B12.7	90	31.501	ENSHGLG00000012838	CEBPZ	70	31.841	Heterocephalus_glaber_female
WBGene00009084	F23B12.7	90	32.380	ENSHGLG00100005398	CEBPZ	60	35.562	Heterocephalus_glaber_male
WBGene00009084	F23B12.7	85	30.501	ENSHCOG00000012132	cebpz	69	30.133	Hippocampus_comes
WBGene00009084	F23B12.7	74	34.583	ENSIPUG00000006584	cebpz	71	34.347	Ictalurus_punctatus
WBGene00009084	F23B12.7	72	34.371	ENSSTOG00000026177	CEBPZ	64	33.713	Ictidomys_tridecemlineatus
WBGene00009084	F23B12.7	81	34.591	ENSJJAG00000011428	Cebpz	64	35.461	Jaculus_jaculus
WBGene00009084	F23B12.7	80	32.943	ENSKMAG00000001280	cebpz	67	33.237	Kryptolebias_marmoratus
WBGene00009084	F23B12.7	82	32.497	ENSLBEG00000023442	CEBPZ	68	35.346	Labrus_bergylta
WBGene00009084	F23B12.7	72	30.912	ENSLACG00000012928	CEBPZ	66	31.384	Latimeria_chalumnae
WBGene00009084	F23B12.7	80	33.504	ENSLOCG00000016867	cebpz	72	32.718	Lepisosteus_oculatus
WBGene00009084	F23B12.7	86	33.097	ENSLAFG00000000953	CEBPZ	64	34.192	Loxodonta_africana
WBGene00009084	F23B12.7	85	33.455	ENSMFAG00000042567	CEBPZ	67	33.514	Macaca_fascicularis
WBGene00009084	F23B12.7	85	33.333	ENSMMUG00000016433	CEBPZ	67	33.514	Macaca_mulatta
WBGene00009084	F23B12.7	85	33.455	ENSMNEG00000039414	CEBPZ	67	33.878	Macaca_nemestrina
WBGene00009084	F23B12.7	89	32.639	ENSMLEG00000031611	CEBPZ	67	33.379	Mandrillus_leucophaeus
WBGene00009084	F23B12.7	79	33.291	ENSMAMG00000019826	cebpz	58	34.307	Mastacembelus_armatus
WBGene00009084	F23B12.7	77	32.293	ENSMZEG00005013159	cebpz	64	32.917	Maylandia_zebra
WBGene00009084	F23B12.7	73	34.375	ENSMGAG00000011280	CEBPZ	73	32.723	Meleagris_gallopavo
WBGene00009084	F23B12.7	86	33.254	ENSMAUG00000008610	Cebpz	65	34.764	Mesocricetus_auratus
WBGene00009084	F23B12.7	77	34.124	ENSMICG00000003324	CEBPZ	76	33.333	Microcebus_murinus
WBGene00009084	F23B12.7	85	32.975	ENSMOCG00000018640	Cebpz	69	33.595	Microtus_ochrogaster
WBGene00009084	F23B12.7	87	31.302	ENSMMOG00000017553	cebpz	71	32.349	Mola_mola
WBGene00009084	F23B12.7	81	32.913	ENSMODG00000023074	CEBPZ	64	34.188	Monodelphis_domestica
WBGene00009084	F23B12.7	72	32.133	ENSMALG00000010892	cebpz	56	40.244	Monopterus_albus
WBGene00009084	F23B12.7	63	35.033	MGP_CAROLIEiJ_G0021891	-	57	35.033	Mus_caroli
WBGene00009084	F23B12.7	86	33.254	ENSMUSG00000024081	Cebpz	66	34.431	Mus_musculus
WBGene00009084	F23B12.7	86	33.255	MGP_SPRETEiJ_G0022806	Cebpz	66	34.431	Mus_spretus
WBGene00009084	F23B12.7	81	32.911	ENSMPUG00000010216	CEBPZ	61	33.381	Mustela_putorius_furo
WBGene00009084	F23B12.7	84	32.862	ENSMLUG00000008929	CEBPZ	64	33.807	Myotis_lucifugus
WBGene00009084	F23B12.7	86	33.294	ENSNGAG00000015241	Cebpz	64	33.381	Nannospalax_galili
WBGene00009084	F23B12.7	79	31.723	ENSNBRG00000008466	cebpz	68	32.659	Neolamprologus_brichardi
WBGene00009084	F23B12.7	81	34.518	ENSNLEG00000016237	CEBPZ	64	34.335	Nomascus_leucogenys
WBGene00009084	F23B12.7	57	46.565	ENSMEUG00000011839	-	54	44.375	Notamacropus_eugenii
WBGene00009084	F23B12.7	51	33.203	ENSODEG00000011002	-	59	35.294	Octodon_degus
WBGene00009084	F23B12.7	77	33.333	ENSONIG00000018713	cebpz	65	33.425	Oreochromis_niloticus
WBGene00009084	F23B12.7	77	33.111	ENSOANG00000005120	CEBPZ	75	32.761	Ornithorhynchus_anatinus
WBGene00009084	F23B12.7	89	33.258	ENSOCUG00000007230	CEBPZ	78	33.208	Oryctolagus_cuniculus
WBGene00009084	F23B12.7	97	31.161	ENSORLG00000017177	cebpz	80	32.201	Oryzias_latipes
WBGene00009084	F23B12.7	75	32.466	ENSORLG00020001900	cebpz	78	31.773	Oryzias_latipes_hni
WBGene00009084	F23B12.7	99	30.900	ENSORLG00015019923	cebpz	72	31.897	Oryzias_latipes_hsok
WBGene00009084	F23B12.7	76	33.696	ENSOMEG00000019691	cebpz	66	33.563	Oryzias_melastigma
WBGene00009084	F23B12.7	82	33.253	ENSOGAG00000002565	CEBPZ	72	33.249	Otolemur_garnettii
WBGene00009084	F23B12.7	73	33.663	ENSOARG00000009540	CEBPZ	60	34.756	Ovis_aries
WBGene00009084	F23B12.7	81	34.391	ENSPPAG00000043370	CEBPZ	64	34.335	Pan_paniscus
WBGene00009084	F23B12.7	72	35.043	ENSPPRG00000003326	CEBPZ	64	34.473	Panthera_pardus
WBGene00009084	F23B12.7	72	35.043	ENSPTIG00000014858	CEBPZ	64	34.473	Panthera_tigris_altaica
WBGene00009084	F23B12.7	81	34.391	ENSPTRG00000011836	CEBPZ	64	34.335	Pan_troglodytes
WBGene00009084	F23B12.7	85	33.455	ENSPANG00000015853	CEBPZ	67	33.514	Papio_anubis
WBGene00009084	F23B12.7	86	32.080	ENSPKIG00000023192	cebpz	66	32.756	Paramormyrops_kingsleyae
WBGene00009084	F23B12.7	84	31.971	ENSPSIG00000006455	CEBPZ	64	33.803	Pelodiscus_sinensis
WBGene00009084	F23B12.7	64	36.160	ENSPMGG00000017825	cebpz	58	36.731	Periophthalmus_magnuspinnatus
WBGene00009084	F23B12.7	81	33.503	ENSPEMG00000017978	Cebpz	68	34.022	Peromyscus_maniculatus_bairdii
WBGene00009084	F23B12.7	72	33.524	ENSPCIG00000007283	CEBPZ	66	33.243	Phascolarctos_cinereus
WBGene00009084	F23B12.7	81	32.864	ENSPFOG00000003831	cebpz	67	34.211	Poecilia_formosa
WBGene00009084	F23B12.7	75	33.700	ENSPLAG00000016264	cebpz	72	33.075	Poecilia_latipinna
WBGene00009084	F23B12.7	79	33.159	ENSPMEG00000013419	cebpz	67	34.211	Poecilia_mexicana
WBGene00009084	F23B12.7	81	33.460	ENSPREG00000012387	cebpz	74	33.247	Poecilia_reticulata
WBGene00009084	F23B12.7	86	32.820	ENSPPYG00000012491	CEBPZ	64	34.621	Pongo_abelii
WBGene00009084	F23B12.7	79	31.355	ENSPCAG00000012718	CEBPZ	66	32.725	Procavia_capensis
WBGene00009084	F23B12.7	90	33.074	ENSPCOG00000017899	CEBPZ	70	33.377	Propithecus_coquereli
WBGene00009084	F23B12.7	68	34.342	ENSPVAG00000013834	CEBPZ	60	32.932	Pteropus_vampyrus
WBGene00009084	F23B12.7	80	31.436	ENSPNYG00000001483	cebpz	72	31.443	Pundamilia_nyererei
WBGene00009084	F23B12.7	71	34.214	ENSPNAG00000010829	cebpz	71	32.801	Pygocentrus_nattereri
WBGene00009084	F23B12.7	90	32.851	ENSRNOG00000005087	Cebpz	72	33.892	Rattus_norvegicus
WBGene00009084	F23B12.7	91	30.944	ENSRBIG00000035805	CEBPZ	69	32.450	Rhinopithecus_bieti
WBGene00009084	F23B12.7	89	31.707	ENSRROG00000045300	CEBPZ	68	33.379	Rhinopithecus_roxellana
WBGene00009084	F23B12.7	72	35.193	ENSSBOG00000032043	CEBPZ	64	34.335	Saimiri_boliviensis_boliviensis
WBGene00009084	F23B12.7	74	32.821	ENSSHAG00000010396	CEBPZ	63	32.976	Sarcophilus_harrisii
WBGene00009084	F23B12.7	79	35.013	ENSSFOG00015001353	cebpz	62	35.470	Scleropages_formosus
WBGene00009084	F23B12.7	78	35.039	ENSSMAG00000007770	cebpz	60	35.581	Scophthalmus_maximus
WBGene00009084	F23B12.7	79	32.474	ENSSDUG00000013019	cebpz	60	35.405	Seriola_dumerili
WBGene00009084	F23B12.7	74	34.877	ENSSLDG00000021173	cebpz	57	35.994	Seriola_lalandi_dorsalis
WBGene00009084	F23B12.7	80	34.211	ENSSPUG00000017394	CEBPZ	64	35.615	Sphenodon_punctatus
WBGene00009084	F23B12.7	80	33.546	ENSSSCG00000008493	CEBPZ	74	32.838	Sus_scrofa
WBGene00009084	F23B12.7	74	34.685	ENSTGUG00000008585	CEBPZ	64	34.573	Taeniopygia_guttata
WBGene00009084	F23B12.7	72	34.626	ENSTRUG00000015584	CEBPZ	72	33.030	Takifugu_rubripes
WBGene00009084	F23B12.7	79	32.774	ENSTBEG00000012108	CEBPZ	64	33.001	Tupaia_belangeri
WBGene00009084	F23B12.7	80	32.526	ENSTTRG00000006886	CEBPZ	64	33.714	Tursiops_truncatus
WBGene00009084	F23B12.7	90	31.350	ENSUAMG00000006489	CEBPZ	77	31.807	Ursus_americanus
WBGene00009084	F23B12.7	94	32.004	ENSUMAG00000014757	CEBPZ	71	32.656	Ursus_maritimus
WBGene00009084	F23B12.7	92	31.510	ENSVPAG00000003306	CEBPZ	70	32.549	Vicugna_pacos
WBGene00009084	F23B12.7	86	32.979	ENSVVUG00000018894	CEBPZ	64	34.000	Vulpes_vulpes
WBGene00009084	F23B12.7	77	33.333	ENSXETG00000000654	cebpz	69	33.780	Xenopus_tropicalis
WBGene00009084	F23B12.7	76	32.785	ENSXMAG00000007499	cebpz	76	32.161	Xiphophorus_maculatus