EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00009128 (Gene tree)
Gene ID: -
Gene Symbol: mrpl-54
Alias: -
Full Name: Mitochondrial Ribosomal Protein%2C Large
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 743 bases
Position: chrI:9159015-9159757
Accession: O17839
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F25H5	Ribosomal_L37	PF08561.10	1.6e-07	1	1
F25H5	Ribosomal_L37	PF08561.10	1.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F25H5.6.2	-	508	NM_060054	F25H5.6.2	133 (aa)	NP_492455	O17839
F25H5.6.1	-	734	-	F25H5.6.1	133 (aa)	-	O17839

Gene Model

Click here to download WBGene00009128's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00009128's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00009128	mrpl-54	71	38.000	ENSG00000183617	MRPL54	55	43.210	Homo_sapiens
WBGene00009128	mrpl-54	59	41.250	ENSAPOG00000022643	mrpl54	55	41.250	Acanthochromis_polyacanthus
WBGene00009128	mrpl-54	58	42.308	ENSAMEG00000005908	MRPL54	54	41.026	Ailuropoda_melanoleuca
WBGene00009128	mrpl-54	59	42.500	ENSACIG00000006438	mrpl54	55	42.500	Amphilophus_citrinellus
WBGene00009128	mrpl-54	59	41.250	ENSAOCG00000006430	mrpl54	55	41.250	Amphiprion_ocellaris
WBGene00009128	mrpl-54	59	41.250	ENSAPEG00000023406	mrpl54	55	41.250	Amphiprion_percula
WBGene00009128	mrpl-54	59	40.000	ENSATEG00000004969	mrpl54	55	40.000	Anabas_testudineus
WBGene00009128	mrpl-54	69	36.735	ENSACAG00000017747	-	69	41.026	Anolis_carolinensis
WBGene00009128	mrpl-54	59	40.741	ENSANAG00000028692	MRPL54	55	40.741	Aotus_nancymaae
WBGene00009128	mrpl-54	59	43.750	ENSACLG00000001877	mrpl54	55	43.750	Astatotilapia_calliptera
WBGene00009128	mrpl-54	59	41.250	ENSAMXG00000018143	mrpl54	54	41.250	Astyanax_mexicanus
WBGene00009128	mrpl-54	58	43.590	ENSBTAG00000008396	MRPL54	54	42.308	Bos_taurus
WBGene00009128	mrpl-54	59	39.506	ENSCJAG00000014998	MRPL54	55	39.506	Callithrix_jacchus
WBGene00009128	mrpl-54	58	41.026	ENSCAFG00000019192	MRPL54	54	39.744	Canis_familiaris
WBGene00009128	mrpl-54	58	41.026	ENSCAFG00020018333	MRPL54	54	39.744	Canis_lupus_dingo
WBGene00009128	mrpl-54	66	41.573	ENSCHIG00000026538	MRPL54	54	42.308	Capra_hircus
WBGene00009128	mrpl-54	71	39.583	ENSCAPG00000012166	MRPL54	80	41.250	Cavia_aperea
WBGene00009128	mrpl-54	59	42.500	ENSCPOG00000031082	MRPL54	55	42.500	Cavia_porcellus
WBGene00009128	mrpl-54	71	37.500	ENSCCAG00000000138	MRPL54	55	38.272	Cebus_capucinus
WBGene00009128	mrpl-54	59	43.210	ENSCATG00000014066	MRPL54	55	43.210	Cercocebus_atys
WBGene00009128	mrpl-54	74	36.893	ENSCLAG00000007908	MRPL54	55	41.026	Chinchilla_lanigera
WBGene00009128	mrpl-54	59	43.210	ENSCSAG00000010950	MRPL54	55	43.210	Chlorocebus_sabaeus
WBGene00009128	mrpl-54	87	31.624	ENSCING00000019896	-	50	36.000	Ciona_intestinalis
WBGene00009128	mrpl-54	84	33.884	ENSCSAVG00000009604	-	80	32.500	Ciona_savignyi
WBGene00009128	mrpl-54	71	40.625	ENSCANG00000027841	MRPL54	55	43.210	Colobus_angolensis_palliatus
WBGene00009128	mrpl-54	59	42.500	ENSCGRG00001019482	Mrpl54	55	42.500	Cricetulus_griseus_chok1gshd
WBGene00009128	mrpl-54	59	42.500	ENSCGRG00000010923	Mrpl54	55	42.500	Cricetulus_griseus_crigri
WBGene00009128	mrpl-54	59	41.250	ENSCSEG00000019883	mrpl54	51	41.250	Cynoglossus_semilaevis
WBGene00009128	mrpl-54	59	43.750	ENSCVAG00000002210	mrpl54	54	43.750	Cyprinodon_variegatus
WBGene00009128	mrpl-54	59	41.250	ENSDARG00000071468	mrpl54	56	41.250	Danio_rerio
WBGene00009128	mrpl-54	58	40.260	ENSDNOG00000007387	MRPL54	54	40.260	Dasypus_novemcinctus
WBGene00009128	mrpl-54	58	43.590	ENSDORG00000005326	Mrpl54	56	42.308	Dipodomys_ordii
WBGene00009128	mrpl-54	59	43.038	FBgn0034579	mRpL54	58	43.038	Drosophila_melanogaster
WBGene00009128	mrpl-54	58	39.744	ENSETEG00000017500	MRPL54	55	39.744	Echinops_telfairi
WBGene00009128	mrpl-54	62	39.759	ENSEBUG00000003179	mrpl54	68	39.759	Eptatretus_burgeri
WBGene00009128	mrpl-54	58	42.308	ENSEASG00005022283	MRPL54	54	42.308	Equus_asinus_asinus
WBGene00009128	mrpl-54	58	43.590	ENSECAG00000001515	MRPL54	54	43.590	Equus_caballus
WBGene00009128	mrpl-54	59	43.750	ENSELUG00000022358	mrpl54	55	43.750	Esox_lucius
WBGene00009128	mrpl-54	58	42.308	ENSFCAG00000007144	MRPL54	54	41.026	Felis_catus
WBGene00009128	mrpl-54	59	45.000	ENSFALG00000011660	MRPL54	70	45.000	Ficedula_albicollis
WBGene00009128	mrpl-54	58	41.026	ENSFDAG00000020803	MRPL54	54	39.744	Fukomys_damarensis
WBGene00009128	mrpl-54	58	41.558	ENSGALG00000027611	MRPL54	61	41.558	Gallus_gallus
WBGene00009128	mrpl-54	59	45.000	ENSGAFG00000016193	mrpl54	55	45.000	Gambusia_affinis
WBGene00009128	mrpl-54	59	42.500	ENSGAGG00000020238	MRPL54	60	42.500	Gopherus_agassizii
WBGene00009128	mrpl-54	71	38.000	ENSGGOG00000014722	MRPL54	55	43.210	Gorilla_gorilla
WBGene00009128	mrpl-54	74	36.275	ENSHGLG00000006157	MRPL54	55	39.744	Heterocephalus_glaber_female
WBGene00009128	mrpl-54	74	36.275	ENSHGLG00100000788	MRPL54	55	39.744	Heterocephalus_glaber_male
WBGene00009128	mrpl-54	59	41.250	ENSHCOG00000000536	mrpl54	54	41.250	Hippocampus_comes
WBGene00009128	mrpl-54	59	42.500	ENSIPUG00000024854	mrpl54	55	42.500	Ictalurus_punctatus
WBGene00009128	mrpl-54	69	38.144	ENSSTOG00000022378	MRPL54	76	42.308	Ictidomys_tridecemlineatus
WBGene00009128	mrpl-54	68	39.130	ENSJJAG00000020405	Mrpl54	55	42.500	Jaculus_jaculus
WBGene00009128	mrpl-54	60	43.210	ENSKMAG00000022310	mrpl54	55	43.210	Kryptolebias_marmoratus
WBGene00009128	mrpl-54	88	31.452	ENSLBEG00000005935	mrpl54	55	40.000	Labrus_bergylta
WBGene00009128	mrpl-54	71	39.000	ENSLACG00000013912	MRPL54	57	42.500	Latimeria_chalumnae
WBGene00009128	mrpl-54	59	41.975	ENSLOCG00000003860	mrpl54	55	41.975	Lepisosteus_oculatus
WBGene00009128	mrpl-54	58	41.026	ENSLAFG00000029657	MRPL54	53	39.744	Loxodonta_africana
WBGene00009128	mrpl-54	59	43.210	ENSMFAG00000003311	MRPL54	55	43.210	Macaca_fascicularis
WBGene00009128	mrpl-54	59	43.210	ENSMMUG00000044080	MRPL54	55	43.210	Macaca_mulatta
WBGene00009128	mrpl-54	59	43.210	ENSMNEG00000039499	MRPL54	55	43.210	Macaca_nemestrina
WBGene00009128	mrpl-54	88	33.607	ENSMAMG00000003291	mrpl54	51	43.662	Mastacembelus_armatus
WBGene00009128	mrpl-54	56	41.892	ENSMGAG00000000951	MRPL54	73	41.892	Meleagris_gallopavo
WBGene00009128	mrpl-54	59	42.500	ENSMAUG00000009543	Mrpl54	56	41.250	Mesocricetus_auratus
WBGene00009128	mrpl-54	59	42.500	ENSMOCG00000017895	Mrpl54	55	42.500	Microtus_ochrogaster
WBGene00009128	mrpl-54	59	41.250	ENSMMOG00000020370	mrpl54	61	41.250	Mola_mola
WBGene00009128	mrpl-54	59	45.000	ENSMODG00000000602	MRPL54	56	45.000	Monodelphis_domestica
WBGene00009128	mrpl-54	60	39.506	ENSMALG00000020280	mrpl54	56	39.506	Monopterus_albus
WBGene00009128	mrpl-54	59	40.000	MGP_CAROLIEiJ_G0015629	Mrpl54	56	40.000	Mus_caroli
WBGene00009128	mrpl-54	59	40.000	ENSMUSG00000034932	Mrpl54	56	40.000	Mus_musculus
WBGene00009128	mrpl-54	59	41.250	MGP_PahariEiJ_G0031042	Mrpl54	56	41.250	Mus_pahari
WBGene00009128	mrpl-54	59	40.000	MGP_SPRETEiJ_G0016447	Mrpl54	56	40.000	Mus_spretus
WBGene00009128	mrpl-54	56	44.000	ENSMLUG00000010801	MRPL54	67	42.667	Myotis_lucifugus
WBGene00009128	mrpl-54	58	37.179	ENSNGAG00000021044	Mrpl54	53	37.179	Nannospalax_galili
WBGene00009128	mrpl-54	59	43.750	ENSNBRG00000000568	mrpl54	55	43.750	Neolamprologus_brichardi
WBGene00009128	mrpl-54	59	43.750	ENSMEUG00000013033	MRPL54	58	43.750	Notamacropus_eugenii
WBGene00009128	mrpl-54	71	37.895	ENSOPRG00000010035	-	57	40.000	Ochotona_princeps
WBGene00009128	mrpl-54	69	37.113	ENSODEG00000013969	MRPL54	54	41.026	Octodon_degus
WBGene00009128	mrpl-54	75	33.654	ENSORLG00000016960	mrpl54	62	38.272	Oryzias_latipes
WBGene00009128	mrpl-54	60	38.272	ENSORLG00020014934	mrpl54	74	38.272	Oryzias_latipes_hni
WBGene00009128	mrpl-54	75	33.654	ENSORLG00015010788	mrpl54	60	37.037	Oryzias_latipes_hsok
WBGene00009128	mrpl-54	59	41.250	ENSOMEG00000009005	mrpl54	55	41.250	Oryzias_melastigma
WBGene00009128	mrpl-54	59	41.250	ENSOGAG00000033519	-	55	41.250	Otolemur_garnettii
WBGene00009128	mrpl-54	59	41.250	ENSOGAG00000026254	-	55	41.250	Otolemur_garnettii
WBGene00009128	mrpl-54	71	38.000	ENSPPAG00000042418	MRPL54	55	43.210	Pan_paniscus
WBGene00009128	mrpl-54	70	39.394	ENSPPRG00000012325	MRPL54	56	44.304	Panthera_pardus
WBGene00009128	mrpl-54	58	43.590	ENSPTIG00000017727	MRPL54	52	42.308	Panthera_tigris_altaica
WBGene00009128	mrpl-54	71	38.000	ENSPTRG00000010276	MRPL54	55	43.210	Pan_troglodytes
WBGene00009128	mrpl-54	59	43.210	ENSPANG00000033944	MRPL54	55	43.210	Papio_anubis
WBGene00009128	mrpl-54	59	43.750	ENSPSIG00000013587	MRPL54	80	43.750	Pelodiscus_sinensis
WBGene00009128	mrpl-54	59	38.750	ENSPMGG00000015972	mrpl54	50	38.750	Periophthalmus_magnuspinnatus
WBGene00009128	mrpl-54	59	41.250	ENSPEMG00000022929	Mrpl54	55	41.250	Peromyscus_maniculatus_bairdii
WBGene00009128	mrpl-54	60	45.679	ENSPCIG00000025383	MRPL54	57	45.679	Phascolarctos_cinereus
WBGene00009128	mrpl-54	86	35.345	ENSPFOG00000007409	mrpl54	55	43.750	Poecilia_formosa
WBGene00009128	mrpl-54	86	35.345	ENSPLAG00000001640	mrpl54	55	45.000	Poecilia_latipinna
WBGene00009128	mrpl-54	86	35.345	ENSPLAG00000001633	mrpl54	55	43.750	Poecilia_latipinna
WBGene00009128	mrpl-54	86	35.345	ENSPMEG00000021068	mrpl54	55	43.750	Poecilia_mexicana
WBGene00009128	mrpl-54	86	35.345	ENSPMEG00000021078	mrpl54	55	43.750	Poecilia_mexicana
WBGene00009128	mrpl-54	86	37.069	ENSPREG00000012425	mrpl54	55	46.250	Poecilia_reticulata
WBGene00009128	mrpl-54	59	43.210	ENSPPYG00000009386	MRPL54	55	43.210	Pongo_abelii
WBGene00009128	mrpl-54	59	41.250	ENSPCAG00000000690	MRPL54	55	41.250	Procavia_capensis
WBGene00009128	mrpl-54	59	43.750	ENSPCOG00000027550	MRPL54	55	43.750	Propithecus_coquereli
WBGene00009128	mrpl-54	59	46.250	ENSPNAG00000000077	mrpl54	55	45.000	Pygocentrus_nattereri
WBGene00009128	mrpl-54	59	45.000	ENSRNOG00000020464	Mrpl54	56	45.000	Rattus_norvegicus
WBGene00009128	mrpl-54	71	40.625	ENSRBIG00000027038	MRPL54	56	43.210	Rhinopithecus_bieti
WBGene00009128	mrpl-54	71	40.625	ENSRROG00000018776	MRPL54	56	43.210	Rhinopithecus_roxellana
WBGene00009128	mrpl-54	68	37.634	ENSSBOG00000028081	MRPL54	54	40.506	Saimiri_boliviensis_boliviensis
WBGene00009128	mrpl-54	59	43.750	ENSSHAG00000002557	MRPL54	56	43.750	Sarcophilus_harrisii
WBGene00009128	mrpl-54	58	38.462	ENSSFOG00015008073	mrpl54	53	38.462	Scleropages_formosus
WBGene00009128	mrpl-54	59	46.250	ENSSMAG00000009226	mrpl54	55	46.250	Scophthalmus_maximus
WBGene00009128	mrpl-54	59	43.750	ENSSDUG00000009545	mrpl54	55	43.750	Seriola_dumerili
WBGene00009128	mrpl-54	59	43.750	ENSSLDG00000001781	mrpl54	55	43.750	Seriola_lalandi_dorsalis
WBGene00009128	mrpl-54	58	38.462	ENSSPUG00000015361	MRPL54	56	38.462	Sphenodon_punctatus
WBGene00009128	mrpl-54	59	45.000	ENSSPAG00000003775	-	55	45.000	Stegastes_partitus
WBGene00009128	mrpl-54	59	45.000	ENSSPAG00000015601	mrpl54	55	45.000	Stegastes_partitus
WBGene00009128	mrpl-54	66	39.326	ENSSSCG00000024242	MRPL54	54	41.026	Sus_scrofa
WBGene00009128	mrpl-54	59	43.750	ENSTRUG00000004609	mrpl54	55	43.750	Takifugu_rubripes
WBGene00009128	mrpl-54	59	40.000	ENSTNIG00000015468	mrpl54	55	40.000	Tetraodon_nigroviridis
WBGene00009128	mrpl-54	67	38.889	ENSTTRG00000004410	MRPL54	55	42.308	Tursiops_truncatus
WBGene00009128	mrpl-54	58	42.308	ENSUAMG00000021572	MRPL54	54	41.026	Ursus_americanus
WBGene00009128	mrpl-54	58	42.308	ENSUMAG00000007416	MRPL54	54	41.026	Ursus_maritimus
WBGene00009128	mrpl-54	58	41.026	ENSVVUG00000004420	MRPL54	54	39.744	Vulpes_vulpes
WBGene00009128	mrpl-54	57	46.753	ENSXETG00000033250	MRPL54	55	46.753	Xenopus_tropicalis
WBGene00009128	mrpl-54	59	43.750	ENSXMAG00000003500	mrpl54	55	43.750	Xiphophorus_maculatus