EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00009163 (Gene tree)
Gene ID: -
Gene Symbol: drsh-1
Alias: -
Full Name: Ribonuclease 3
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 4385 bases
Position: chrI:9781338-9785722
Accession: O01326
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F26E4	Ribonuclease_3	PF00636.26	1.3e-37	1	2
F26E4	Ribonuclease_3	PF00636.26	1.3e-37	2	2
F26E4	Ribonuclease_3	PF00636.26	1.3e-37	1	2
F26E4	Ribonuclease_3	PF00636.26	1.3e-37	2	2
F26E4	dsrm	PF00035.26	3.1e-11	1	1
F26E4	dsrm	PF00035.26	3.1e-11	1	1
F26E4	Ribonucleas_3_3	PF14622.6	2.7e-37	1	2
F26E4	Ribonucleas_3_3	PF14622.6	2.7e-37	2	2
F26E4	Ribonucleas_3_3	PF14622.6	2.7e-37	1	2
F26E4	Ribonucleas_3_3	PF14622.6	2.7e-37	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F26E4.10b	-	3359	NM_001128988	F26E4.10b	1081 (aa)	NP_001122460	UPI000052838D
F26E4.10a	-	3394	NM_060198	F26E4.10a	1086 (aa)	NP_492599	O01326

Gene Model

Click here to download WBGene00009163's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00009163's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00009163	drsh-1	76	36.623	ENSG00000113360	DROSHA	62	36.493	Homo_sapiens
WBGene00009163	drsh-1	76	36.623	ENSAMEG00000006000	DROSHA	61	36.493	Ailuropoda_melanoleuca
WBGene00009163	drsh-1	76	37.218	ENSACIG00000019308	drosha	84	36.364	Amphilophus_citrinellus
WBGene00009163	drsh-1	76	36.266	ENSATEG00000021939	drosha	65	35.986	Anabas_testudineus
WBGene00009163	drsh-1	76	36.742	ENSAPLG00000004372	DROSHA	61	36.742	Anas_platyrhynchos
WBGene00009163	drsh-1	76	35.910	ENSACAG00000007970	DROSHA	60	35.910	Anolis_carolinensis
WBGene00009163	drsh-1	77	35.047	ENSANAG00000020506	DROSHA	81	35.399	Aotus_nancymaae
WBGene00009163	drsh-1	76	37.455	ENSACLG00000012227	drosha	66	35.584	Astatotilapia_calliptera
WBGene00009163	drsh-1	76	35.553	ENSAMXG00000005582	drosha	65	35.383	Astyanax_mexicanus
WBGene00009163	drsh-1	76	36.504	ENSBTAG00000017551	DROSHA	64	36.374	Bos_taurus
WBGene00009163	drsh-1	76	36.623	ENSCJAG00000018881	DROSHA	61	36.493	Callithrix_jacchus
WBGene00009163	drsh-1	53	39.832	ENSCAFG00000018939	-	94	39.832	Canis_familiaris
WBGene00009163	drsh-1	77	35.915	ENSCAFG00020017559	DROSHA	91	37.863	Canis_lupus_dingo
WBGene00009163	drsh-1	76	36.504	ENSCHIG00000022226	DROSHA	64	36.374	Capra_hircus
WBGene00009163	drsh-1	76	36.623	ENSCPOG00000015051	DROSHA	64	36.623	Cavia_porcellus
WBGene00009163	drsh-1	77	36.205	ENSCCAG00000027283	DROSHA	81	36.623	Cebus_capucinus
WBGene00009163	drsh-1	76	36.623	ENSCATG00000016833	DROSHA	79	37.023	Cercocebus_atys
WBGene00009163	drsh-1	76	36.623	ENSCLAG00000013048	DROSHA	62	36.493	Chinchilla_lanigera
WBGene00009163	drsh-1	76	36.623	ENSCSAG00000017202	DROSHA	60	36.493	Chlorocebus_sabaeus
WBGene00009163	drsh-1	75	44.314	ENSCPBG00000000467	DROSHA	60	44.314	Chrysemys_picta_bellii
WBGene00009163	drsh-1	74	34.597	ENSCSAVG00000010638	-	97	34.597	Ciona_savignyi
WBGene00009163	drsh-1	77	35.856	ENSCANG00000035071	DROSHA	82	36.266	Colobus_angolensis_palliatus
WBGene00009163	drsh-1	76	36.742	ENSCGRG00001008885	Drosha	60	36.611	Cricetulus_griseus_chok1gshd
WBGene00009163	drsh-1	76	36.742	ENSCGRG00000006944	Drosha	60	36.611	Cricetulus_griseus_crigri
WBGene00009163	drsh-1	76	36.147	ENSCSEG00000001452	drosha	65	34.220	Cynoglossus_semilaevis
WBGene00009163	drsh-1	76	36.504	ENSCVAG00000004619	drosha	64	36.217	Cyprinodon_variegatus
WBGene00009163	drsh-1	76	35.791	ENSDARG00000055563	drosha	66	35.566	Danio_rerio
WBGene00009163	drsh-1	77	36.205	ENSDNOG00000001537	DROSHA	61	36.493	Dasypus_novemcinctus
WBGene00009163	drsh-1	76	36.742	ENSDORG00000005624	Drosha	63	36.611	Dipodomys_ordii
WBGene00009163	drsh-1	75	39.645	FBgn0026722	drosha	63	39.763	Drosophila_melanogaster
WBGene00009163	drsh-1	62	33.763	ENSETEG00000007814	DROSHA	50	33.763	Echinops_telfairi
WBGene00009163	drsh-1	59	37.670	ENSEBUG00000005974	-	96	37.670	Eptatretus_burgeri
WBGene00009163	drsh-1	76	36.623	ENSEASG00005007149	DROSHA	64	36.493	Equus_asinus_asinus
WBGene00009163	drsh-1	76	36.623	ENSECAG00000013578	DROSHA	62	36.493	Equus_caballus
WBGene00009163	drsh-1	76	34.007	ENSEEUG00000006351	DROSHA	60	34.007	Erinaceus_europaeus
WBGene00009163	drsh-1	75	36.178	ENSELUG00000015039	drosha	60	36.058	Esox_lucius
WBGene00009163	drsh-1	76	36.623	ENSFCAG00000000360	DROSHA	64	36.493	Felis_catus
WBGene00009163	drsh-1	76	36.623	ENSFALG00000012843	DROSHA	61	36.504	Ficedula_albicollis
WBGene00009163	drsh-1	76	36.623	ENSFDAG00000018414	DROSHA	62	36.493	Fukomys_damarensis
WBGene00009163	drsh-1	67	32.580	ENSFHEG00000003840	drosha	62	32.580	Fundulus_heteroclitus
WBGene00009163	drsh-1	76	36.742	ENSGALG00000012916	DROSHA	62	36.742	Gallus_gallus
WBGene00009163	drsh-1	76	36.623	ENSGAFG00000016853	drosha	66	36.510	Gambusia_affinis
WBGene00009163	drsh-1	76	36.504	ENSGAGG00000005621	DROSHA	62	36.504	Gopherus_agassizii
WBGene00009163	drsh-1	77	36.205	ENSGGOG00000011006	DROSHA	81	36.623	Gorilla_gorilla
WBGene00009163	drsh-1	73	36.658	ENSHBUG00000015907	drosha	63	36.658	Haplochromis_burtoni
WBGene00009163	drsh-1	76	36.623	ENSHGLG00000018873	DROSHA	61	36.493	Heterocephalus_glaber_female
WBGene00009163	drsh-1	76	36.623	ENSHGLG00100015793	DROSHA	61	36.493	Heterocephalus_glaber_male
WBGene00009163	drsh-1	75	36.655	ENSHCOG00000008454	drosha	72	36.332	Hippocampus_comes
WBGene00009163	drsh-1	76	36.710	ENSIPUG00000021202	drosha	66	36.322	Ictalurus_punctatus
WBGene00009163	drsh-1	77	35.764	ENSSTOG00000016323	DROSHA	91	43.260	Ictidomys_tridecemlineatus
WBGene00009163	drsh-1	76	36.623	ENSJJAG00000019758	Drosha	61	36.493	Jaculus_jaculus
WBGene00009163	drsh-1	76	36.081	ENSLBEG00000006606	drosha	66	35.764	Labrus_bergylta
WBGene00009163	drsh-1	76	36.266	ENSLACG00000005937	DROSHA	62	36.266	Latimeria_chalumnae
WBGene00009163	drsh-1	76	36.009	ENSLOCG00000012852	drosha	64	35.102	Lepisosteus_oculatus
WBGene00009163	drsh-1	76	36.623	ENSLAFG00000013831	DROSHA	67	36.623	Loxodonta_africana
WBGene00009163	drsh-1	76	36.623	ENSMFAG00000003055	DROSHA	63	36.331	Macaca_fascicularis
WBGene00009163	drsh-1	77	36.205	ENSMMUG00000012193	DROSHA	81	36.623	Macaca_mulatta
WBGene00009163	drsh-1	76	36.742	ENSMNEG00000037529	DROSHA	63	36.450	Macaca_nemestrina
WBGene00009163	drsh-1	76	34.446	ENSMLEG00000024167	DROSHA	61	34.323	Mandrillus_leucophaeus
WBGene00009163	drsh-1	76	36.730	ENSMAMG00000012613	drosha	83	35.986	Mastacembelus_armatus
WBGene00009163	drsh-1	76	37.455	ENSMZEG00005019487	drosha	64	37.313	Maylandia_zebra
WBGene00009163	drsh-1	76	36.623	ENSMGAG00000005087	DROSHA	62	36.504	Meleagris_gallopavo
WBGene00009163	drsh-1	76	36.742	ENSMAUG00000002863	Drosha	60	36.611	Mesocricetus_auratus
WBGene00009163	drsh-1	77	35.517	ENSMICG00000002241	DROSHA	81	35.723	Microcebus_murinus
WBGene00009163	drsh-1	76	36.742	ENSMOCG00000015044	Drosha	61	36.611	Microtus_ochrogaster
WBGene00009163	drsh-1	73	35.539	ENSMMOG00000004016	drosha	80	35.539	Mola_mola
WBGene00009163	drsh-1	76	35.648	ENSMODG00000004807	DROSHA	62	35.648	Monodelphis_domestica
WBGene00009163	drsh-1	76	36.147	ENSMALG00000010542	drosha	64	35.963	Monopterus_albus
WBGene00009163	drsh-1	76	36.742	MGP_CAROLIEiJ_G0019687	Drosha	82	36.742	Mus_caroli
WBGene00009163	drsh-1	76	36.742	ENSMUSG00000022191	Drosha	60	36.611	Mus_musculus
WBGene00009163	drsh-1	76	36.742	MGP_PahariEiJ_G0016063	Drosha	82	36.742	Mus_pahari
WBGene00009163	drsh-1	76	36.861	MGP_SPRETEiJ_G0020580	Drosha	82	36.861	Mus_spretus
WBGene00009163	drsh-1	76	36.623	ENSMPUG00000015237	DROSHA	60	36.493	Mustela_putorius_furo
WBGene00009163	drsh-1	76	36.266	ENSMLUG00000002581	DROSHA	60	36.137	Myotis_lucifugus
WBGene00009163	drsh-1	76	36.124	ENSNGAG00000017329	Drosha	59	35.995	Nannospalax_galili
WBGene00009163	drsh-1	76	34.096	ENSNBRG00000001870	drosha	90	32.382	Neolamprologus_brichardi
WBGene00009163	drsh-1	77	36.088	ENSNLEG00000013963	DROSHA	81	36.504	Nomascus_leucogenys
WBGene00009163	drsh-1	65	34.211	ENSOPRG00000010845	DROSHA	52	34.069	Ochotona_princeps
WBGene00009163	drsh-1	76	36.623	ENSODEG00000001911	DROSHA	60	36.493	Octodon_degus
WBGene00009163	drsh-1	76	37.455	ENSONIG00000006578	drosha	63	36.625	Oreochromis_niloticus
WBGene00009163	drsh-1	68	31.593	ENSOANG00000015744	-	95	31.952	Ornithorhynchus_anatinus
WBGene00009163	drsh-1	76	36.623	ENSOCUG00000000367	DROSHA	61	36.493	Oryctolagus_cuniculus
WBGene00009163	drsh-1	76	36.742	ENSORLG00000013592	drosha	66	35.847	Oryzias_latipes
WBGene00009163	drsh-1	76	36.223	ENSORLG00020002854	drosha	83	35.731	Oryzias_latipes_hni
WBGene00009163	drsh-1	76	36.698	ENSORLG00015003156	drosha	83	36.195	Oryzias_latipes_hsok
WBGene00009163	drsh-1	76	36.742	ENSOMEG00000001062	drosha	65	36.458	Oryzias_melastigma
WBGene00009163	drsh-1	76	35.595	ENSOGAG00000005424	DROSHA	67	35.595	Otolemur_garnettii
WBGene00009163	drsh-1	77	35.739	ENSPPAG00000037526	DROSHA	81	36.147	Pan_paniscus
WBGene00009163	drsh-1	76	36.623	ENSPPRG00000002687	DROSHA	62	36.493	Panthera_pardus
WBGene00009163	drsh-1	76	36.623	ENSPTIG00000017523	DROSHA	62	36.493	Panthera_tigris_altaica
WBGene00009163	drsh-1	76	36.623	ENSPTRG00000016762	DROSHA	64	36.493	Pan_troglodytes
WBGene00009163	drsh-1	76	36.623	ENSPANG00000003027	DROSHA	63	36.331	Papio_anubis
WBGene00009163	drsh-1	76	35.910	ENSPKIG00000011514	drosha	64	35.640	Paramormyrops_kingsleyae
WBGene00009163	drsh-1	76	36.742	ENSPEMG00000000607	Drosha	60	36.611	Peromyscus_maniculatus_bairdii
WBGene00009163	drsh-1	76	36.623	ENSPCIG00000006010	DROSHA	61	36.623	Phascolarctos_cinereus
WBGene00009163	drsh-1	76	36.623	ENSPREG00000022302	drosha	67	36.510	Poecilia_reticulata
WBGene00009163	drsh-1	76	36.786	ENSPPYG00000015370	DROSHA	60	36.655	Pongo_abelii
WBGene00009163	drsh-1	65	36.842	ENSPCAG00000007190	DROSHA	52	36.601	Procavia_capensis
WBGene00009163	drsh-1	77	35.356	ENSPCOG00000028511	DROSHA	81	35.561	Propithecus_coquereli
WBGene00009163	drsh-1	76	34.405	ENSPVAG00000013167	DROSHA	60	34.282	Pteropus_vampyrus
WBGene00009163	drsh-1	76	37.455	ENSPNYG00000000398	drosha	85	36.092	Pundamilia_nyererei
WBGene00009163	drsh-1	76	35.867	ENSPNAG00000011876	drosha	71	35.689	Pygocentrus_nattereri
WBGene00009163	drsh-1	76	36.742	ENSRNOG00000013451	Drosha	60	36.611	Rattus_norvegicus
WBGene00009163	drsh-1	75	36.603	ENSRBIG00000032786	DROSHA	81	35.867	Rhinopithecus_bieti
WBGene00009163	drsh-1	76	36.623	ENSRROG00000028199	DROSHA	62	36.493	Rhinopithecus_roxellana
WBGene00009163	drsh-1	76	36.623	ENSSBOG00000024008	DROSHA	81	35.084	Saimiri_boliviensis_boliviensis
WBGene00009163	drsh-1	76	36.493	ENSSHAG00000015198	DROSHA	80	36.493	Sarcophilus_harrisii
WBGene00009163	drsh-1	73	36.498	ENSSFOG00015009776	drosha	64	36.531	Scleropages_formosus
WBGene00009163	drsh-1	75	36.145	ENSSMAG00000008069	drosha	63	36.091	Scophthalmus_maximus
WBGene00009163	drsh-1	76	35.791	ENSSDUG00000010944	drosha	84	35.615	Seriola_dumerili
WBGene00009163	drsh-1	76	35.791	ENSSLDG00000025271	drosha	84	35.615	Seriola_lalandi_dorsalis
WBGene00009163	drsh-1	76	34.565	ENSSPUG00000006902	DROSHA	61	34.565	Sphenodon_punctatus
WBGene00009163	drsh-1	76	36.504	ENSSSCG00000016809	DROSHA	64	36.615	Sus_scrofa
WBGene00009163	drsh-1	76	36.817	ENSTGUG00000001955	DROSHA	61	36.936	Taeniopygia_guttata
WBGene00009163	drsh-1	71	35.945	ENSTRUG00000017778	drosha	63	35.945	Takifugu_rubripes
WBGene00009163	drsh-1	77	36.069	ENSTNIG00000008688	drosha	83	36.069	Tetraodon_nigroviridis
WBGene00009163	drsh-1	69	35.160	ENSTBEG00000000537	DROSHA	57	35.000	Tupaia_belangeri
WBGene00009163	drsh-1	76	36.504	ENSTTRG00000004210	DROSHA	60	36.374	Tursiops_truncatus
WBGene00009163	drsh-1	76	36.623	ENSUAMG00000025257	DROSHA	62	36.493	Ursus_americanus
WBGene00009163	drsh-1	76	36.623	ENSUMAG00000014097	DROSHA	91	37.462	Ursus_maritimus
WBGene00009163	drsh-1	76	33.413	ENSVPAG00000011260	DROSHA	75	33.413	Vicugna_pacos
WBGene00009163	drsh-1	76	36.623	ENSVVUG00000022212	DROSHA	93	37.904	Vulpes_vulpes
WBGene00009163	drsh-1	76	36.580	ENSXETG00000016701	drosha	63	35.756	Xenopus_tropicalis