EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00009477 (Gene tree)
Gene ID: -
Gene Symbol: rbpl-1
Alias: -
Full Name: Retinoblastoma Binding Protein Like
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 4626 bases
Position: chrI:9009260-9013885
Accession: O62235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F36F2	zf-CCHC_2	PF13696.6	1.8e-08	1	1
F36F2	zf-CCHC_2	PF13696.6	5.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F36F2.3a	-	3414	NM_001037886	F36F2.3a	1128 (aa)	NP_001032975	O62235
F36F2.3b	-	1119	NM_001037887	F36F2.3b	363 (aa)	NP_001032976	Q38G51

Gene Model

Click here to download WBGene00009477's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00009477's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00009477	rbpl-1	51	31.053	ENSDARG00000116389	CR450764.8	81	35.319	Danio_rerio
WBGene00009477	rbpl-1	51	31.606	ENSDARG00000094196	si:dkey-27d5.10	79	35.498	Danio_rerio
WBGene00009477	rbpl-1	51	31.088	ENSDARG00000111826	zgc:174354	79	35.065	Danio_rerio
WBGene00009477	rbpl-1	51	31.579	ENSDARG00000113889	zgc:174355	81	35.319	Danio_rerio
WBGene00009477	rbpl-1	51	31.088	ENSDARG00000088552	si:dkey-23f9.13	79	35.065	Danio_rerio
WBGene00009477	rbpl-1	51	31.606	ENSDARG00000113994	zgc:174354	79	35.498	Danio_rerio
WBGene00009477	rbpl-1	51	31.088	ENSDARG00000094335	si:dkey-23f9.12	79	35.065	Danio_rerio
WBGene00009477	rbpl-1	51	31.088	ENSDARG00000100754	CR450764.1	80	34.894	Danio_rerio
WBGene00009477	rbpl-1	51	31.606	ENSDARG00000070812	si:ch211-156l18.6	79	35.498	Danio_rerio
WBGene00009477	rbpl-1	51	31.579	ENSDARG00000110591	si:dkey-27d5.6	80	34.894	Danio_rerio
WBGene00009477	rbpl-1	50	33.696	FBgn0086129	snama	57	32.288	Drosophila_melanogaster