EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00009521 (Gene tree)
Gene ID: -
Gene Symbol: F38A1.8
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 6981 bases
Position: chrIV:1232872-1239852
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F38A1	SRP54	PF00448.22	5.5e-51	1	1
F38A1	SRP54_N	PF02881.19	7.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F38A1.8	-	2606	NM_171254	F38A1.8	625 (aa)	NP_741303	G4RYA5

Gene Model

Click here to download WBGene00009521's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00009521's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00009521	F38A1.8	99	47.945	ENSG00000182934	SRPRA	99	48.097	Homo_sapiens
WBGene00009521	F38A1.8	99	48.176	ENSAPOG00000017588	srpra	99	48.632	Acanthochromis_polyacanthus
WBGene00009521	F38A1.8	99	50.076	ENSAMEG00000000117	SRPRA	99	49.315	Ailuropoda_melanoleuca
WBGene00009521	F38A1.8	99	46.942	ENSACIG00000021588	srpra	99	47.713	Amphilophus_citrinellus
WBGene00009521	F38A1.8	99	48.025	ENSAOCG00000018884	srpra	99	48.499	Amphiprion_ocellaris
WBGene00009521	F38A1.8	99	48.024	ENSAPEG00000022286	srpra	99	48.341	Amphiprion_percula
WBGene00009521	F38A1.8	84	70.701	ENSATEG00000023578	srpra	99	49.396	Anabas_testudineus
WBGene00009521	F38A1.8	94	47.573	ENSAPLG00000016079	SRPRA	99	49.188	Anas_platyrhynchos
WBGene00009521	F38A1.8	99	47.273	ENSACAG00000000108	SRPRA	99	48.636	Anolis_carolinensis
WBGene00009521	F38A1.8	99	47.720	ENSANAG00000020346	SRPRA	99	48.024	Aotus_nancymaae
WBGene00009521	F38A1.8	99	49.242	ENSACLG00000000518	srpra	99	49.848	Astatotilapia_calliptera
WBGene00009521	F38A1.8	99	47.205	ENSAMXG00000009975	srpra	99	47.114	Astyanax_mexicanus
WBGene00009521	F38A1.8	99	49.390	ENSBTAG00000014105	SRPRA	99	48.765	Bos_taurus
WBGene00009521	F38A1.8	99	47.561	ENSCJAG00000008752	SRPRA	99	47.866	Callithrix_jacchus
WBGene00009521	F38A1.8	99	47.786	ENSCAFG00000010474	SRPRA	99	48.308	Canis_familiaris
WBGene00009521	F38A1.8	99	48.397	ENSCAFG00020010608	SRPRA	99	48.923	Canis_lupus_dingo
WBGene00009521	F38A1.8	99	49.619	ENSCHIG00000012423	SRPRA	99	48.765	Capra_hircus
WBGene00009521	F38A1.8	80	64.672	ENSTSYG00000005187	SRPRA	99	45.814	Carlito_syrichta
WBGene00009521	F38A1.8	94	48.118	ENSCAPG00000007098	SRPRA	91	71.642	Cavia_aperea
WBGene00009521	F38A1.8	99	48.171	ENSCPOG00000014976	SRPRA	91	71.642	Cavia_porcellus
WBGene00009521	F38A1.8	99	48.244	ENSCCAG00000025602	SRPRA	99	47.939	Cebus_capucinus
WBGene00009521	F38A1.8	99	48.550	ENSCATG00000039354	SRPRA	99	48.176	Cercocebus_atys
WBGene00009521	F38A1.8	99	48.255	ENSCLAG00000016839	SRPRA	99	48.255	Chinchilla_lanigera
WBGene00009521	F38A1.8	99	47.720	ENSCSAG00000002271	SRPRA	99	48.024	Chlorocebus_sabaeus
WBGene00009521	F38A1.8	53	73.096	ENSCHOG00000010015	-	72	73.096	Choloepus_hoffmanni
WBGene00009521	F38A1.8	99	47.173	ENSCPBG00000011128	SRPRA	99	48.636	Chrysemys_picta_bellii
WBGene00009521	F38A1.8	99	50.460	ENSCING00000008954	-	99	50.765	Ciona_intestinalis
WBGene00009521	F38A1.8	99	50.627	ENSCSAVG00000005602	-	99	51.411	Ciona_savignyi
WBGene00009521	F38A1.8	99	49.160	ENSCANG00000032337	SRPRA	99	48.024	Colobus_angolensis_palliatus
WBGene00009521	F38A1.8	99	48.466	ENSCGRG00001017670	Srpr	99	48.855	Cricetulus_griseus_chok1gshd
WBGene00009521	F38A1.8	99	48.466	ENSCGRG00000009892	Srpr	90	72.059	Cricetulus_griseus_crigri
WBGene00009521	F38A1.8	99	48.754	ENSCSEG00000002374	srpra	99	49.302	Cynoglossus_semilaevis
WBGene00009521	F38A1.8	99	49.773	ENSCVAG00000019881	srpra	99	49.924	Cyprinodon_variegatus
WBGene00009521	F38A1.8	99	48.862	ENSDARG00000061124	srpra	99	49.014	Danio_rerio
WBGene00009521	F38A1.8	99	49.398	ENSDNOG00000010821	SRPRA	99	48.494	Dasypus_novemcinctus
WBGene00009521	F38A1.8	99	48.858	ENSDORG00000016719	Srpr	99	48.780	Dipodomys_ordii
WBGene00009521	F38A1.8	99	48.086	FBgn0010391	Gtp-bp	99	48.000	Drosophila_melanogaster
WBGene00009521	F38A1.8	99	48.636	ENSETEG00000013956	SRPRA	99	48.024	Echinops_telfairi
WBGene00009521	F38A1.8	50	68.438	ENSEBUG00000002602	srpra	92	57.583	Eptatretus_burgeri
WBGene00009521	F38A1.8	99	49.847	ENSEASG00005022980	SRPRA	99	48.841	Equus_asinus_asinus
WBGene00009521	F38A1.8	99	49.694	ENSECAG00000014692	SRPRA	99	48.686	Equus_caballus
WBGene00009521	F38A1.8	99	47.023	ENSEEUG00000007920	SRPRA	99	47.023	Erinaceus_europaeus
WBGene00009521	F38A1.8	99	48.265	ENSELUG00000017643	srpra	99	49.544	Esox_lucius
WBGene00009521	F38A1.8	79	42.366	ENSFCAG00000030894	-	98	41.040	Felis_catus
WBGene00009521	F38A1.8	99	49.771	ENSFCAG00000011274	-	99	48.855	Felis_catus
WBGene00009521	F38A1.8	98	48.466	ENSFALG00000005048	SRPRA	99	47.981	Ficedula_albicollis
WBGene00009521	F38A1.8	99	47.866	ENSFDAG00000016229	SRPRA	92	68.056	Fukomys_damarensis
WBGene00009521	F38A1.8	99	48.338	ENSFHEG00000016959	srpra	99	48.943	Fundulus_heteroclitus
WBGene00009521	F38A1.8	99	48.694	ENSGMOG00000013244	srpra	99	49.155	Gadus_morhua
WBGene00009521	F38A1.8	79	75.926	ENSGALG00000030759	SRPRA	73	79.592	Gallus_gallus
WBGene00009521	F38A1.8	99	49.057	ENSGAFG00000000453	srpra	99	49.375	Gambusia_affinis
WBGene00009521	F38A1.8	99	47.793	ENSGACG00000006550	srpra	99	48.308	Gasterosteus_aculeatus
WBGene00009521	F38A1.8	99	48.018	ENSGAGG00000021157	SRPRA	99	48.333	Gopherus_agassizii
WBGene00009521	F38A1.8	99	47.945	ENSGGOG00000012962	SRPRA	99	48.097	Gorilla_gorilla
WBGene00009521	F38A1.8	99	49.242	ENSHBUG00000000119	srpra	99	49.848	Haplochromis_burtoni
WBGene00009521	F38A1.8	99	48.554	ENSHGLG00000001597	SRPR	94	72.180	Heterocephalus_glaber_female
WBGene00009521	F38A1.8	99	48.554	ENSHGLG00100006449	SRPR	94	72.180	Heterocephalus_glaber_male
WBGene00009521	F38A1.8	99	49.447	ENSHCOG00000010749	srpra	99	49.371	Hippocampus_comes
WBGene00009521	F38A1.8	94	47.411	ENSIPUG00000000867	srpra	99	47.249	Ictalurus_punctatus
WBGene00009521	F38A1.8	99	47.328	ENSSTOG00000009897	SRPRA	99	47.634	Ictidomys_tridecemlineatus
WBGene00009521	F38A1.8	99	48.086	ENSJJAG00000020272	Srpr	99	49.008	Jaculus_jaculus
WBGene00009521	F38A1.8	99	48.193	ENSKMAG00000002280	srpra	99	48.494	Kryptolebias_marmoratus
WBGene00009521	F38A1.8	99	48.567	ENSLBEG00000009608	srpra	99	49.321	Labrus_bergylta
WBGene00009521	F38A1.8	99	48.476	ENSLACG00000017781	SRPRA	99	49.165	Latimeria_chalumnae
WBGene00009521	F38A1.8	99	48.407	ENSLOCG00000002733	srpra	99	48.558	Lepisosteus_oculatus
WBGene00009521	F38A1.8	99	48.998	ENSLAFG00000010252	SRPRA	99	47.866	Loxodonta_africana
WBGene00009521	F38A1.8	99	47.720	ENSMFAG00000032606	SRPRA	99	48.024	Macaca_fascicularis
WBGene00009521	F38A1.8	99	47.720	ENSMMUG00000007938	SRPRA	99	48.024	Macaca_mulatta
WBGene00009521	F38A1.8	99	47.793	ENSMNEG00000030709	SRPRA	99	48.323	Macaca_nemestrina
WBGene00009521	F38A1.8	99	48.550	ENSMLEG00000043404	SRPRA	99	48.176	Mandrillus_leucophaeus
WBGene00009521	F38A1.8	99	48.407	ENSMAMG00000000473	srpra	99	48.476	Mastacembelus_armatus
WBGene00009521	F38A1.8	99	49.242	ENSMZEG00005013432	srpra	99	49.848	Maylandia_zebra
WBGene00009521	F38A1.8	93	47.798	ENSMGAG00000000732	SRPRA	99	49.431	Meleagris_gallopavo
WBGene00009521	F38A1.8	99	48.466	ENSMAUG00000015648	Srpr	99	48.702	Mesocricetus_auratus
WBGene00009521	F38A1.8	99	48.550	ENSMICG00000015981	SRPRA	99	48.024	Microcebus_murinus
WBGene00009521	F38A1.8	99	49.008	ENSMOCG00000008311	Srpr	99	48.550	Microtus_ochrogaster
WBGene00009521	F38A1.8	99	48.281	ENSMMOG00000005019	srpra	99	48.433	Mola_mola
WBGene00009521	F38A1.8	99	48.416	ENSMODG00000004576	-	99	48.710	Monodelphis_domestica
WBGene00009521	F38A1.8	99	47.561	ENSMALG00000011343	srpra	99	47.720	Monopterus_albus
WBGene00009521	F38A1.8	99	48.392	MGP_CAROLIEiJ_G0031951	Srpr	86	72.180	Mus_caroli
WBGene00009521	F38A1.8	99	49.160	ENSMUSG00000032042	Srpr	86	72.180	Mus_musculus
WBGene00009521	F38A1.8	99	48.392	MGP_PahariEiJ_G0014816	Srpr	86	72.180	Mus_pahari
WBGene00009521	F38A1.8	99	46.299	MGP_SPRETEiJ_G0033075	Srpr	99	46.288	Mus_spretus
WBGene00009521	F38A1.8	99	49.005	ENSMPUG00000006626	SRPRA	99	48.397	Mustela_putorius_furo
WBGene00009521	F38A1.8	99	49.462	ENSMLUG00000017334	SRPRA	99	48.848	Myotis_lucifugus
WBGene00009521	F38A1.8	99	48.323	ENSNGAG00000015686	Srpr	99	48.323	Nannospalax_galili
WBGene00009521	F38A1.8	99	48.939	ENSNBRG00000017311	srpra	99	49.697	Neolamprologus_brichardi
WBGene00009521	F38A1.8	99	47.167	ENSNLEG00000007467	SRPRA	99	49.410	Nomascus_leucogenys
WBGene00009521	F38A1.8	93	49.438	ENSMEUG00000004956	SRPRA	99	49.758	Notamacropus_eugenii
WBGene00009521	F38A1.8	99	45.884	ENSOPRG00000013160	SRPRA	99	46.646	Ochotona_princeps
WBGene00009521	F38A1.8	99	49.238	ENSODEG00000004730	SRPRA	99	48.328	Octodon_degus
WBGene00009521	F38A1.8	99	49.091	ENSONIG00000005324	srpra	99	49.848	Oreochromis_niloticus
WBGene00009521	F38A1.8	99	47.866	ENSOCUG00000017057	SRPRA	99	47.866	Oryctolagus_cuniculus
WBGene00009521	F38A1.8	88	70.701	ENSORLG00000014676	srpra	94	70.625	Oryzias_latipes
WBGene00009521	F38A1.8	99	48.624	ENSORLG00020009240	srpra	99	49.083	Oryzias_latipes_hni
WBGene00009521	F38A1.8	99	48.758	ENSORLG00015015405	srpra	99	48.930	Oryzias_latipes_hsok
WBGene00009521	F38A1.8	99	48.899	ENSOMEG00000005872	srpra	99	49.080	Oryzias_melastigma
WBGene00009521	F38A1.8	99	48.702	ENSOGAG00000008926	SRPRA	99	48.397	Otolemur_garnettii
WBGene00009521	F38A1.8	99	48.097	ENSOARG00000012397	SRPRA	99	47.222	Ovis_aries
WBGene00009521	F38A1.8	99	47.945	ENSPPAG00000030813	SRPRA	99	48.097	Pan_paniscus
WBGene00009521	F38A1.8	99	49.771	ENSPPRG00000001542	SRPRA	99	48.855	Panthera_pardus
WBGene00009521	F38A1.8	99	49.771	ENSPTIG00000006989	SRPRA	99	48.855	Panthera_tigris_altaica
WBGene00009521	F38A1.8	99	47.945	ENSPTRG00000028360	SRPRA	99	48.097	Pan_troglodytes
WBGene00009521	F38A1.8	99	47.720	ENSPANG00000010858	SRPRA	99	48.024	Papio_anubis
WBGene00009521	F38A1.8	99	48.674	ENSPKIG00000016106	srpra	99	49.142	Paramormyrops_kingsleyae
WBGene00009521	F38A1.8	93	48.792	ENSPSIG00000012009	SRPRA	99	48.867	Pelodiscus_sinensis
WBGene00009521	F38A1.8	99	49.844	ENSPMGG00000001393	srpra	99	50.156	Periophthalmus_magnuspinnatus
WBGene00009521	F38A1.8	99	49.311	ENSPEMG00000018279	Srpr	99	48.702	Peromyscus_maniculatus_bairdii
WBGene00009521	F38A1.8	99	46.357	ENSPMAG00000009559	srpra	99	46.986	Petromyzon_marinus
WBGene00009521	F38A1.8	99	48.718	ENSPCIG00000010207	SRPRA	99	49.014	Phascolarctos_cinereus
WBGene00009521	F38A1.8	99	48.411	ENSPFOG00000003114	srpra	99	49.319	Poecilia_formosa
WBGene00009521	F38A1.8	99	48.411	ENSPLAG00000007323	srpra	99	49.470	Poecilia_latipinna
WBGene00009521	F38A1.8	99	48.343	ENSPMEG00000015658	srpra	99	49.247	Poecilia_mexicana
WBGene00009521	F38A1.8	99	48.499	ENSPREG00000004937	srpra	99	49.017	Poecilia_reticulata
WBGene00009521	F38A1.8	87	76.000	ENSPPYG00000004045	SRPRA	98	76.000	Pongo_abelii
WBGene00009521	F38A1.8	62	81.746	ENSPCAG00000003801	-	62	81.746	Procavia_capensis
WBGene00009521	F38A1.8	99	48.397	ENSPCOG00000025726	SRPRA	99	47.872	Propithecus_coquereli
WBGene00009521	F38A1.8	99	49.694	ENSPVAG00000000993	SRPRA	99	48.926	Pteropus_vampyrus
WBGene00009521	F38A1.8	99	49.242	ENSPNYG00000012371	srpra	99	49.848	Pundamilia_nyererei
WBGene00009521	F38A1.8	99	48.165	ENSPNAG00000013476	srpra	99	48.318	Pygocentrus_nattereri
WBGene00009521	F38A1.8	99	48.313	ENSRNOG00000010543	Srpra	99	48.702	Rattus_norvegicus
WBGene00009521	F38A1.8	99	48.780	ENSRBIG00000008702	SRPRA	99	48.476	Rhinopithecus_bieti
WBGene00009521	F38A1.8	99	47.568	ENSRROG00000029494	SRPRA	99	47.872	Rhinopithecus_roxellana
WBGene00009521	F38A1.8	99	47.568	ENSSBOG00000035892	SRPRA	99	47.872	Saimiri_boliviensis_boliviensis
WBGene00009521	F38A1.8	94	48.792	ENSSHAG00000009168	SRPRA	99	51.963	Sarcophilus_harrisii
WBGene00009521	F38A1.8	99	48.499	ENSSFOG00015008837	srpra	99	48.819	Scleropages_formosus
WBGene00009521	F38A1.8	99	48.038	ENSSMAG00000002783	srpra	99	48.661	Scophthalmus_maximus
WBGene00009521	F38A1.8	99	48.025	ENSSDUG00000013920	srpra	99	48.499	Seriola_dumerili
WBGene00009521	F38A1.8	99	47.504	ENSSLDG00000008601	srpra	93	47.806	Seriola_lalandi_dorsalis
WBGene00009521	F38A1.8	72	52.220	ENSSARG00000012434	SRPRA	77	51.153	Sorex_araneus
WBGene00009521	F38A1.8	99	46.565	ENSSPUG00000018221	SRPRA	99	48.784	Sphenodon_punctatus
WBGene00009521	F38A1.8	99	48.421	ENSSPAG00000005103	srpra	99	49.023	Stegastes_partitus
WBGene00009521	F38A1.8	99	48.777	ENSSSCG00000015227	SRPRA	99	49.304	Sus_scrofa
WBGene00009521	F38A1.8	92	48.875	ENSTGUG00000000815	SRPRA	99	48.371	Taeniopygia_guttata
WBGene00009521	F38A1.8	99	48.080	ENSTRUG00000006856	srpra	99	48.694	Takifugu_rubripes
WBGene00009521	F38A1.8	99	46.747	ENSTNIG00000010316	srpra	99	46.596	Tetraodon_nigroviridis
WBGene00009521	F38A1.8	99	49.619	ENSTTRG00000001558	SRPRA	99	49.077	Tursiops_truncatus
WBGene00009521	F38A1.8	99	49.924	ENSUAMG00000005510	SRPRA	99	49.014	Ursus_americanus
WBGene00009521	F38A1.8	94	47.512	ENSUMAG00000002269	SRPRA	98	47.512	Ursus_maritimus
WBGene00009521	F38A1.8	69	81.746	ENSVPAG00000001077	SRPRA	74	81.746	Vicugna_pacos
WBGene00009521	F38A1.8	99	48.318	ENSVVUG00000020094	SRPRA	99	49.231	Vulpes_vulpes
WBGene00009521	F38A1.8	99	41.766	ENSXETG00000003920	srpra	99	41.742	Xenopus_tropicalis
WBGene00009521	F38A1.8	86	69.427	ENSXCOG00000001286	srpra	99	68.807	Xiphophorus_couchianus
WBGene00009521	F38A1.8	99	48.788	ENSXMAG00000028401	srpra	99	48.939	Xiphophorus_maculatus