EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00009557 (Gene tree)
Gene ID: -
Gene Symbol: mtcu-1
Alias: -
Full Name: Nuclear encoded Mitochondrial TRNA Carboxymethyl-amino-methyl modification of Uridine residues
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 4319 bases
Position: chrI:14770689-14775007
Accession: Q9XTZ1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F39B2	MMR_HSR1	PF01926.23	7.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F39B2.7	-	1345	NM_061172	F39B2.7	439 (aa)	NP_493573	Q9XTZ1

Gene Model

Click here to download WBGene00009557's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00009557's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00009557	mtcu-1	99	34.848	ENSG00000130299	GTPBP3	93	35.000	Homo_sapiens
WBGene00009557	mtcu-1	99	34.249	ENSAPOG00000012575	gtpbp3	91	34.249	Acanthochromis_polyacanthus
WBGene00009557	mtcu-1	99	35.931	ENSAMEG00000010489	GTPBP3	93	35.931	Ailuropoda_melanoleuca
WBGene00009557	mtcu-1	99	32.589	ENSACIG00000012338	gtpbp3	94	32.589	Amphilophus_citrinellus
WBGene00009557	mtcu-1	68	38.361	ENSAOCG00000008891	gtpbp3	65	38.361	Amphiprion_ocellaris
WBGene00009557	mtcu-1	99	33.333	ENSAPEG00000007438	gtpbp3	91	33.333	Amphiprion_percula
WBGene00009557	mtcu-1	99	33.263	ENSATEG00000017428	gtpbp3	92	33.263	Anabas_testudineus
WBGene00009557	mtcu-1	99	33.913	ENSANAG00000030487	GTPBP3	100	33.486	Aotus_nancymaae
WBGene00009557	mtcu-1	99	33.827	ENSACLG00000012124	gtpbp3	91	33.827	Astatotilapia_calliptera
WBGene00009557	mtcu-1	100	32.008	ENSAMXG00000019041	gtpbp3	93	32.008	Astyanax_mexicanus
WBGene00009557	mtcu-1	99	36.403	ENSBTAG00000004200	GTPBP3	80	36.403	Bos_taurus
WBGene00009557	mtcu-1	99	33.913	ENSCJAG00000009731	GTPBP3	93	34.130	Callithrix_jacchus
WBGene00009557	mtcu-1	78	35.359	ENSCAFG00000015378	GTPBP3	90	35.359	Canis_familiaris
WBGene00009557	mtcu-1	85	34.949	ENSCAFG00020010423	GTPBP3	88	34.949	Canis_lupus_dingo
WBGene00009557	mtcu-1	99	36.147	ENSCHIG00000021205	GTPBP3	95	36.147	Capra_hircus
WBGene00009557	mtcu-1	75	32.378	ENSCAPG00000016788	GTPBP3	100	32.378	Cavia_aperea
WBGene00009557	mtcu-1	99	34.490	ENSCPOG00000027093	GTPBP3	96	34.490	Cavia_porcellus
WBGene00009557	mtcu-1	99	34.199	ENSCCAG00000020717	GTPBP3	93	34.194	Cebus_capucinus
WBGene00009557	mtcu-1	99	34.565	ENSCATG00000030444	GTPBP3	93	34.565	Cercocebus_atys
WBGene00009557	mtcu-1	84	38.971	ENSCHOG00000002671	GTPBP3	82	38.971	Choloepus_hoffmanni
WBGene00009557	mtcu-1	99	31.723	ENSCPBG00000012434	GTPBP3	93	31.723	Chrysemys_picta_bellii
WBGene00009557	mtcu-1	99	34.348	ENSCANG00000028746	GTPBP3	93	34.348	Colobus_angolensis_palliatus
WBGene00009557	mtcu-1	99	33.117	ENSCGRG00001000390	Gtpbp3	89	34.409	Cricetulus_griseus_chok1gshd
WBGene00009557	mtcu-1	81	31.915	ENSCGRG00000005854	Gtpbp3	92	33.509	Cricetulus_griseus_crigri
WBGene00009557	mtcu-1	76	33.908	ENSCSEG00000016590	gtpbp3	78	39.116	Cynoglossus_semilaevis
WBGene00009557	mtcu-1	99	33.758	ENSCVAG00000021988	gtpbp3	90	33.758	Cyprinodon_variegatus
WBGene00009557	mtcu-1	99	32.836	ENSDARG00000018650	gtpbp3	95	32.836	Danio_rerio
WBGene00009557	mtcu-1	99	34.483	ENSDNOG00000042002	GTPBP3	93	34.483	Dasypus_novemcinctus
WBGene00009557	mtcu-1	99	32.415	FBgn0039189	CG18528	95	32.415	Drosophila_melanogaster
WBGene00009557	mtcu-1	99	32.582	ENSETEG00000006991	GTPBP3	93	33.607	Echinops_telfairi
WBGene00009557	mtcu-1	66	36.486	ENSEBUG00000007810	gtpbp3	50	37.829	Eptatretus_burgeri
WBGene00009557	mtcu-1	99	36.087	ENSEASG00005002907	GTPBP3	93	36.087	Equus_asinus_asinus
WBGene00009557	mtcu-1	99	36.087	ENSECAG00000018651	GTPBP3	93	36.087	Equus_caballus
WBGene00009557	mtcu-1	99	34.433	ENSELUG00000019607	gtpbp3	93	34.433	Esox_lucius
WBGene00009557	mtcu-1	99	34.773	ENSFCAG00000001008	GTPBP3	93	34.773	Felis_catus
WBGene00009557	mtcu-1	99	33.404	ENSFHEG00000022235	gtpbp3	93	32.816	Fundulus_heteroclitus
WBGene00009557	mtcu-1	68	39.604	ENSGMOG00000013665	gtpbp3	69	39.604	Gadus_morhua
WBGene00009557	mtcu-1	90	33.967	ENSGALG00000037256	GTPBP3	100	33.967	Gallus_gallus
WBGene00009557	mtcu-1	99	33.121	ENSGAFG00000007045	gtpbp3	95	33.047	Gambusia_affinis
WBGene00009557	mtcu-1	99	33.474	ENSGACG00000007790	gtpbp3	100	33.474	Gasterosteus_aculeatus
WBGene00009557	mtcu-1	99	32.265	ENSGAGG00000009639	GTPBP3	93	32.265	Gopherus_agassizii
WBGene00009557	mtcu-1	99	34.848	ENSGGOG00000015580	GTPBP3	93	35.000	Gorilla_gorilla
WBGene00009557	mtcu-1	99	33.909	ENSHBUG00000004647	gtpbp3	95	33.615	Haplochromis_burtoni
WBGene00009557	mtcu-1	99	33.758	ENSHGLG00000002806	GTPBP3	96	34.120	Heterocephalus_glaber_female
WBGene00009557	mtcu-1	99	32.174	ENSHCOG00000007532	gtpbp3	92	32.174	Hippocampus_comes
WBGene00009557	mtcu-1	99	33.824	ENSIPUG00000007198	gtpbp3	91	33.824	Ictalurus_punctatus
WBGene00009557	mtcu-1	99	34.868	ENSSTOG00000006318	GTPBP3	93	34.868	Ictidomys_tridecemlineatus
WBGene00009557	mtcu-1	99	33.617	ENSKMAG00000003914	gtpbp3	98	33.617	Kryptolebias_marmoratus
WBGene00009557	mtcu-1	99	32.906	ENSLBEG00000027113	gtpbp3	93	32.906	Labrus_bergylta
WBGene00009557	mtcu-1	99	33.473	ENSLACG00000005677	GTPBP3	95	31.890	Latimeria_chalumnae
WBGene00009557	mtcu-1	99	32.075	ENSLOCG00000003052	gtpbp3	93	32.075	Lepisosteus_oculatus
WBGene00009557	mtcu-1	99	35.319	ENSLAFG00000013978	GTPBP3	93	36.383	Loxodonta_africana
WBGene00009557	mtcu-1	99	34.565	ENSMFAG00000004345	GTPBP3	93	34.565	Macaca_fascicularis
WBGene00009557	mtcu-1	99	34.565	ENSMMUG00000023403	GTPBP3	94	33.817	Macaca_mulatta
WBGene00009557	mtcu-1	99	34.565	ENSMNEG00000038380	GTPBP3	93	34.565	Macaca_nemestrina
WBGene00009557	mtcu-1	99	34.130	ENSMLEG00000028812	GTPBP3	93	34.565	Mandrillus_leucophaeus
WBGene00009557	mtcu-1	99	32.432	ENSMAMG00000007104	gtpbp3	90	32.432	Mastacembelus_armatus
WBGene00009557	mtcu-1	99	33.833	ENSMZEG00005018819	gtpbp3	94	33.833	Maylandia_zebra
WBGene00009557	mtcu-1	99	32.211	ENSMAUG00000018131	Gtpbp3	99	35.498	Mesocricetus_auratus
WBGene00009557	mtcu-1	99	34.904	ENSMICG00000028047	GTPBP3	93	34.232	Microcebus_murinus
WBGene00009557	mtcu-1	99	34.979	ENSMOCG00000015131	Gtpbp3	93	35.560	Microtus_ochrogaster
WBGene00009557	mtcu-1	99	34.335	ENSMMOG00000007062	gtpbp3	89	34.335	Mola_mola
WBGene00009557	mtcu-1	99	33.333	ENSMALG00000020955	gtpbp3	97	33.333	Monopterus_albus
WBGene00009557	mtcu-1	99	33.766	MGP_CAROLIEiJ_G0031188	Gtpbp3	93	35.217	Mus_caroli
WBGene00009557	mtcu-1	99	33.766	ENSMUSG00000007610	Gtpbp3	93	35.217	Mus_musculus
WBGene00009557	mtcu-1	99	34.130	MGP_PahariEiJ_G0021653	Gtpbp3	93	34.764	Mus_pahari
WBGene00009557	mtcu-1	99	33.766	MGP_SPRETEiJ_G0032307	Gtpbp3	93	35.217	Mus_spretus
WBGene00009557	mtcu-1	99	35.498	ENSMPUG00000015889	GTPBP3	93	35.714	Mustela_putorius_furo
WBGene00009557	mtcu-1	99	36.069	ENSMLUG00000010529	GTPBP3	93	36.069	Myotis_lucifugus
WBGene00009557	mtcu-1	99	35.076	ENSNGAG00000017920	Gtpbp3	93	35.076	Nannospalax_galili
WBGene00009557	mtcu-1	99	31.659	ENSNBRG00000021625	gtpbp3	89	31.659	Neolamprologus_brichardi
WBGene00009557	mtcu-1	65	39.249	ENSNLEG00000005748	GTPBP3	75	36.923	Nomascus_leucogenys
WBGene00009557	mtcu-1	78	35.311	ENSMEUG00000013022	GTPBP3	83	35.311	Notamacropus_eugenii
WBGene00009557	mtcu-1	65	35.826	ENSOPRG00000005761	-	63	35.826	Ochotona_princeps
WBGene00009557	mtcu-1	99	33.827	ENSONIG00000010114	gtpbp3	92	33.827	Oreochromis_niloticus
WBGene00009557	mtcu-1	99	30.291	ENSOANG00000013734	GTPBP3	93	30.847	Ornithorhynchus_anatinus
WBGene00009557	mtcu-1	99	35.729	ENSORLG00000008868	gtpbp3	91	35.729	Oryzias_latipes
WBGene00009557	mtcu-1	99	36.000	ENSORLG00020013457	gtpbp3	91	36.000	Oryzias_latipes_hni
WBGene00009557	mtcu-1	99	35.729	ENSORLG00015009095	gtpbp3	91	35.729	Oryzias_latipes_hsok
WBGene00009557	mtcu-1	99	34.672	ENSOMEG00000004989	gtpbp3	91	34.672	Oryzias_melastigma
WBGene00009557	mtcu-1	99	35.498	ENSOGAG00000007014	GTPBP3	93	35.498	Otolemur_garnettii
WBGene00009557	mtcu-1	99	36.501	ENSOARG00000016953	GTPBP3	80	36.501	Ovis_aries
WBGene00009557	mtcu-1	99	34.632	ENSPPAG00000027605	GTPBP3	93	34.783	Pan_paniscus
WBGene00009557	mtcu-1	99	35.000	ENSPPRG00000010547	GTPBP3	93	35.000	Panthera_pardus
WBGene00009557	mtcu-1	99	34.848	ENSPTRG00000010670	GTPBP3	93	35.000	Pan_troglodytes
WBGene00009557	mtcu-1	99	34.783	ENSPANG00000017711	GTPBP3	94	34.025	Papio_anubis
WBGene00009557	mtcu-1	99	35.095	ENSPKIG00000008711	gtpbp3	93	35.095	Paramormyrops_kingsleyae
WBGene00009557	mtcu-1	99	33.612	ENSPMGG00000014730	gtpbp3	92	33.612	Periophthalmus_magnuspinnatus
WBGene00009557	mtcu-1	99	33.766	ENSPEMG00000011836	Gtpbp3	93	34.848	Peromyscus_maniculatus_bairdii
WBGene00009557	mtcu-1	99	34.205	ENSPCIG00000018394	GTPBP3	93	34.205	Phascolarctos_cinereus
WBGene00009557	mtcu-1	99	33.333	ENSPFOG00000011268	gtpbp3	91	33.333	Poecilia_formosa
WBGene00009557	mtcu-1	99	33.333	ENSPLAG00000006204	gtpbp3	94	33.262	Poecilia_latipinna
WBGene00009557	mtcu-1	99	33.333	ENSPMEG00000015227	gtpbp3	90	33.333	Poecilia_mexicana
WBGene00009557	mtcu-1	99	33.333	ENSPREG00000012552	gtpbp3	90	33.333	Poecilia_reticulata
WBGene00009557	mtcu-1	99	35.000	ENSPPYG00000009711	GTPBP3	93	35.153	Pongo_abelii
WBGene00009557	mtcu-1	99	34.348	ENSPCOG00000021581	GTPBP3	93	34.839	Propithecus_coquereli
WBGene00009557	mtcu-1	99	33.265	ENSPVAG00000007877	GTPBP3	94	33.265	Pteropus_vampyrus
WBGene00009557	mtcu-1	99	33.827	ENSPNYG00000014028	gtpbp3	91	33.827	Pundamilia_nyererei
WBGene00009557	mtcu-1	99	32.773	ENSPNAG00000011434	gtpbp3	84	35.772	Pygocentrus_nattereri
WBGene00009557	mtcu-1	99	34.416	ENSRNOG00000023403	Gtpbp3	93	35.435	Rattus_norvegicus
WBGene00009557	mtcu-1	99	34.565	ENSRBIG00000039889	GTPBP3	93	34.565	Rhinopithecus_bieti
WBGene00009557	mtcu-1	99	34.130	ENSRROG00000033731	GTPBP3	93	33.983	Rhinopithecus_roxellana
WBGene00009557	mtcu-1	99	32.049	YMR023C	MSS1	93	32.049	Saccharomyces_cerevisiae
WBGene00009557	mtcu-1	99	34.199	ENSSBOG00000003356	GTPBP3	93	34.348	Saimiri_boliviensis_boliviensis
WBGene00009557	mtcu-1	99	33.895	ENSSFOG00015019813	gtpbp3	94	33.895	Scleropages_formosus
WBGene00009557	mtcu-1	99	32.842	ENSSMAG00000020947	gtpbp3	92	32.842	Scophthalmus_maximus
WBGene00009557	mtcu-1	99	33.684	ENSSDUG00000010662	gtpbp3	92	33.684	Seriola_dumerili
WBGene00009557	mtcu-1	99	33.691	ENSSLDG00000002467	gtpbp3	93	33.691	Seriola_lalandi_dorsalis
WBGene00009557	mtcu-1	68	37.500	ENSSPUG00000007326	GTPBP3	71	37.500	Sphenodon_punctatus
WBGene00009557	mtcu-1	99	34.038	ENSSPAG00000003839	gtpbp3	91	34.038	Stegastes_partitus
WBGene00009557	mtcu-1	99	35.699	ENSSSCG00000038440	GTPBP3	92	42.222	Sus_scrofa
WBGene00009557	mtcu-1	99	34.172	ENSTRUG00000003828	gtpbp3	92	34.172	Takifugu_rubripes
WBGene00009557	mtcu-1	99	32.981	ENSTNIG00000010179	gtpbp3	93	32.981	Tetraodon_nigroviridis
WBGene00009557	mtcu-1	99	32.869	ENSTTRG00000003140	GTPBP3	94	32.869	Tursiops_truncatus
WBGene00009557	mtcu-1	99	35.870	ENSVVUG00000016125	GTPBP3	95	35.870	Vulpes_vulpes
WBGene00009557	mtcu-1	99	33.547	ENSXETG00000013066	gtpbp3	99	33.547	Xenopus_tropicalis
WBGene00009557	mtcu-1	99	31.887	ENSXCOG00000008924	gtpbp3	96	31.887	Xiphophorus_couchianus
WBGene00009557	mtcu-1	99	31.858	ENSXMAG00000002392	gtpbp3	96	31.858	Xiphophorus_maculatus