EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00009586 (Gene tree)
Gene ID: -
Gene Symbol: F40F9.10
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 2186 bases
Position: chrV:9711447-9713632
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F40F9	Met_10	PF02475.16	3.8e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F40F9.10	-	1537	NM_073101	F40F9.10	460 (aa)	NP_505502	Q20240

Gene Model

Click here to download WBGene00009586's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00009586's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00009586	F40F9.10	58	33.457	ENSACIG00000012982	trmt12	56	37.327	Amphilophus_citrinellus
WBGene00009586	F40F9.10	54	37.500	ENSAMXG00000040366	trmt12	54	39.565	Astyanax_mexicanus
WBGene00009586	F40F9.10	50	36.864	ENSCPOG00000026520	TRMT12	50	38.182	Cavia_porcellus
WBGene00009586	F40F9.10	51	38.655	ENSCING00000019633	-	70	40.952	Ciona_intestinalis
WBGene00009586	F40F9.10	54	38.492	ENSCGRG00001014834	Trmt12	59	39.600	Cricetulus_griseus_chok1gshd
WBGene00009586	F40F9.10	50	39.076	ENSCVAG00000005590	trmt12	54	40.553	Cyprinodon_variegatus
WBGene00009586	F40F9.10	50	38.197	ENSDARG00000060338	trmt12	68	36.788	Danio_rerio
WBGene00009586	F40F9.10	51	36.555	ENSETEG00000009373	TRMT12	50	37.333	Echinops_telfairi
WBGene00009586	F40F9.10	50	34.483	ENSELUG00000004240	trmt12	58	35.945	Esox_lucius
WBGene00009586	F40F9.10	57	33.459	ENSGALG00000006773	TRMT12	50	37.281	Gallus_gallus
WBGene00009586	F40F9.10	51	35.270	ENSGACG00000017351	trmt12	61	34.802	Gasterosteus_aculeatus
WBGene00009586	F40F9.10	56	35.249	ENSHGLG00000020498	TRMT12	53	36.910	Heterocephalus_glaber_female
WBGene00009586	F40F9.10	56	35.249	ENSHGLG00100020132	TRMT12	53	36.910	Heterocephalus_glaber_male
WBGene00009586	F40F9.10	50	39.149	ENSHCOG00000005050	trmt12	68	38.723	Hippocampus_comes
WBGene00009586	F40F9.10	50	39.224	ENSIPUG00000018011	trmt12	52	39.224	Ictalurus_punctatus
WBGene00009586	F40F9.10	51	36.134	ENSSTOG00000030617	TRMT12	51	36.681	Ictidomys_tridecemlineatus
WBGene00009586	F40F9.10	50	38.034	ENSLOCG00000015290	trmt12	56	38.034	Lepisosteus_oculatus
WBGene00009586	F40F9.10	58	34.201	ENSMMOG00000000412	trmt12	54	37.788	Mola_mola
WBGene00009586	F40F9.10	56	35.741	ENSMODG00000011798	-	50	37.500	Monodelphis_domestica
WBGene00009586	F40F9.10	53	32.806	ENSMODG00000021403	-	50	34.862	Monodelphis_domestica
WBGene00009586	F40F9.10	56	36.194	MGP_CAROLIEiJ_G0019820	Trmt12	51	39.301	Mus_caroli
WBGene00009586	F40F9.10	51	37.395	ENSMUSG00000037085	Trmt12	51	38.428	Mus_musculus
WBGene00009586	F40F9.10	53	37.349	MGP_PahariEiJ_G0019829	Trmt12	51	38.865	Mus_pahari
WBGene00009586	F40F9.10	53	36.145	MGP_SPRETEiJ_G0020717	Trmt12	51	37.991	Mus_spretus
WBGene00009586	F40F9.10	54	36.364	ENSNBRG00000021510	trmt12	63	36.364	Neolamprologus_brichardi
WBGene00009586	F40F9.10	56	35.249	ENSODEG00000018933	TRMT12	52	37.555	Octodon_degus
WBGene00009586	F40F9.10	57	35.036	ENSOCUG00000026379	TRMT12	50	38.496	Oryctolagus_cuniculus
WBGene00009586	F40F9.10	57	35.206	ENSORLG00000001280	trmt12	54	38.605	Oryzias_latipes
WBGene00009586	F40F9.10	57	35.206	ENSORLG00020000708	trmt12	54	38.605	Oryzias_latipes_hni
WBGene00009586	F40F9.10	53	37.143	ENSORLG00015012344	trmt12	54	38.605	Oryzias_latipes_hsok
WBGene00009586	F40F9.10	50	38.793	ENSPKIG00000004640	trmt12	59	38.793	Paramormyrops_kingsleyae
WBGene00009586	F40F9.10	56	34.733	ENSPCAG00000000556	TRMT12	54	36.066	Procavia_capensis
WBGene00009586	F40F9.10	58	36.029	ENSPNAG00000019028	trmt12	55	39.914	Pygocentrus_nattereri
WBGene00009586	F40F9.10	53	37.349	ENSRNOG00000008978	Trmt12	52	38.865	Rattus_norvegicus
WBGene00009586	F40F9.10	50	35.193	ENSSHAG00000003345	TRMT12	53	35.193	Sarcophilus_harrisii
WBGene00009586	F40F9.10	58	35.036	ENSSFOG00015006090	trmt12	65	35.185	Scleropages_formosus
WBGene00009586	F40F9.10	53	36.437	ENSSPUG00000005321	TRMT12	51	37.339	Sphenodon_punctatus
WBGene00009586	F40F9.10	50	38.298	ENSTRUG00000011548	trmt12	58	38.298	Takifugu_rubripes
WBGene00009586	F40F9.10	50	38.889	ENSUAMG00000002067	TRMT12	50	40.092	Ursus_americanus
WBGene00009586	F40F9.10	51	36.975	ENSXETG00000009641	trmt12	57	36.975	Xenopus_tropicalis