EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00010089 (Gene tree)
Gene ID: -
Gene Symbol: hpo-31
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 2171 bases
Position: chrV:13823052-13825222
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F55B12	PolyA_pol	PF01743.20	2.3e-35	1	1
F55B12	PolyA_pol	PF01743.20	2.3e-35	1	1
F55B12	PolyA_pol	PF01743.20	2.3e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F55B12.4.1	-	1484	NM_001028805	F55B12.4.1	436 (aa)	NP_001023976	Q93795
F55B12.4.3	-	1407	NM_001028805	F55B12.4.3	436 (aa)	NP_001023976	Q93795
F55B12.4.2	-	1419	NM_001028805	F55B12.4.2	436 (aa)	NP_001023976	Q93795

Gene Model

Click here to download WBGene00010089's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00010089's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00010089	hpo-31	94	43.705	ENSG00000072756	TRNT1	94	43.705	Homo_sapiens
WBGene00010089	hpo-31	93	44.118	ENSAPOG00000013687	trnt1	94	44.118	Acanthochromis_polyacanthus
WBGene00010089	hpo-31	94	44.917	ENSAMEG00000014520	TRNT1	94	44.917	Ailuropoda_melanoleuca
WBGene00010089	hpo-31	94	43.373	ENSACIG00000021706	trnt1	95	43.373	Amphilophus_citrinellus
WBGene00010089	hpo-31	94	43.689	ENSAOCG00000024612	trnt1	95	43.689	Amphiprion_ocellaris
WBGene00010089	hpo-31	92	38.366	ENSAPEG00000022627	trnt1	92	38.366	Amphiprion_percula
WBGene00010089	hpo-31	94	44.175	ENSATEG00000008928	trnt1	99	44.175	Anabas_testudineus
WBGene00010089	hpo-31	89	42.714	ENSAPLG00000004258	TRNT1	95	42.714	Anas_platyrhynchos
WBGene00010089	hpo-31	95	44.418	ENSACAG00000005657	TRNT1	93	44.418	Anolis_carolinensis
WBGene00010089	hpo-31	94	43.705	ENSANAG00000024802	TRNT1	94	43.705	Aotus_nancymaae
WBGene00010089	hpo-31	94	43.301	ENSACLG00000022227	trnt1	95	43.301	Astatotilapia_calliptera
WBGene00010089	hpo-31	93	45.012	ENSAMXG00000003960	trnt1	93	45.012	Astyanax_mexicanus
WBGene00010089	hpo-31	94	43.230	ENSBTAG00000019534	TRNT1	94	43.230	Bos_taurus
WBGene00010089	hpo-31	94	44.181	ENSCJAG00000015466	TRNT1	94	44.181	Callithrix_jacchus
WBGene00010089	hpo-31	95	44.076	ENSCAFG00000005985	TRNT1	93	44.076	Canis_familiaris
WBGene00010089	hpo-31	95	44.076	ENSCAFG00020014746	TRNT1	93	44.076	Canis_lupus_dingo
WBGene00010089	hpo-31	94	44.181	ENSCHIG00000007030	TRNT1	93	44.181	Capra_hircus
WBGene00010089	hpo-31	94	44.418	ENSTSYG00000013390	TRNT1	94	44.418	Carlito_syrichta
WBGene00010089	hpo-31	88	34.606	ENSCAPG00000006891	TRNT1	99	34.606	Cavia_aperea
WBGene00010089	hpo-31	94	43.373	ENSCPOG00000007849	TRNT1	79	61.682	Cavia_porcellus
WBGene00010089	hpo-31	93	43.478	ENSCCAG00000002919	TRNT1	99	43.478	Cebus_capucinus
WBGene00010089	hpo-31	94	44.391	ENSCATG00000031985	TRNT1	92	44.391	Cercocebus_atys
WBGene00010089	hpo-31	94	43.914	ENSCLAG00000005186	TRNT1	82	63.068	Chinchilla_lanigera
WBGene00010089	hpo-31	94	44.181	ENSCSAG00000011052	TRNT1	94	44.181	Chlorocebus_sabaeus
WBGene00010089	hpo-31	79	62.857	ENSCHOG00000005712	TRNT1	78	62.857	Choloepus_hoffmanni
WBGene00010089	hpo-31	94	44.524	ENSCPBG00000017636	TRNT1	92	44.524	Chrysemys_picta_bellii
WBGene00010089	hpo-31	93	41.320	ENSCING00000007069	-	99	41.320	Ciona_intestinalis
WBGene00010089	hpo-31	94	39.173	ENSCSAVG00000007494	-	95	39.173	Ciona_savignyi
WBGene00010089	hpo-31	94	44.181	ENSCANG00000039030	TRNT1	94	44.181	Colobus_angolensis_palliatus
WBGene00010089	hpo-31	94	43.943	ENSCGRG00001009998	Trnt1	94	43.943	Cricetulus_griseus_chok1gshd
WBGene00010089	hpo-31	94	43.943	ENSCGRG00000013410	Trnt1	85	61.326	Cricetulus_griseus_crigri
WBGene00010089	hpo-31	94	45.060	ENSCSEG00000008157	trnt1	97	44.963	Cynoglossus_semilaevis
WBGene00010089	hpo-31	94	42.651	ENSCVAG00000019770	trnt1	95	42.651	Cyprinodon_variegatus
WBGene00010089	hpo-31	94	43.961	ENSDARG00000075297	trnt1	94	43.961	Danio_rerio
WBGene00010089	hpo-31	94	42.892	ENSDNOG00000008837	TRNT1	93	42.892	Dasypus_novemcinctus
WBGene00010089	hpo-31	94	44.893	ENSDORG00000014035	Trnt1	94	44.893	Dipodomys_ordii
WBGene00010089	hpo-31	94	45.036	FBgn0037369	CG2100	84	45.036	Drosophila_melanogaster
WBGene00010089	hpo-31	53	56.277	ENSETEG00000018177	TRNT1	92	56.277	Echinops_telfairi
WBGene00010089	hpo-31	94	43.447	ENSEBUG00000012779	-	95	43.447	Eptatretus_burgeri
WBGene00010089	hpo-31	94	44.181	ENSEASG00005003577	TRNT1	94	44.181	Equus_asinus_asinus
WBGene00010089	hpo-31	94	43.943	ENSECAG00000014420	TRNT1	94	43.943	Equus_caballus
WBGene00010089	hpo-31	94	44.575	ENSEEUG00000009567	TRNT1	94	44.575	Erinaceus_europaeus
WBGene00010089	hpo-31	94	42.926	ENSELUG00000003802	trnt1	94	42.926	Esox_lucius
WBGene00010089	hpo-31	95	44.550	ENSFCAG00000026805	TRNT1	93	44.550	Felis_catus
WBGene00010089	hpo-31	88	43.878	ENSFALG00000013539	TRNT1	98	43.878	Ficedula_albicollis
WBGene00010089	hpo-31	94	44.153	ENSFDAG00000018412	TRNT1	81	64.205	Fukomys_damarensis
WBGene00010089	hpo-31	94	43.447	ENSFHEG00000019294	trnt1	95	43.447	Fundulus_heteroclitus
WBGene00010089	hpo-31	93	42.822	ENSGMOG00000007460	trnt1	94	42.822	Gadus_morhua
WBGene00010089	hpo-31	93	42.926	ENSGALG00000017368	TRNT1	93	42.926	Gallus_gallus
WBGene00010089	hpo-31	94	43.826	ENSGAFG00000008647	trnt1	95	43.826	Gambusia_affinis
WBGene00010089	hpo-31	93	43.796	ENSGACG00000011903	trnt1	95	44.246	Gasterosteus_aculeatus
WBGene00010089	hpo-31	93	44.231	ENSGAGG00000020942	TRNT1	91	44.231	Gopherus_agassizii
WBGene00010089	hpo-31	94	43.705	ENSGGOG00000015286	TRNT1	94	43.705	Gorilla_gorilla
WBGene00010089	hpo-31	94	43.301	ENSHBUG00000002797	trnt1	95	43.301	Haplochromis_burtoni
WBGene00010089	hpo-31	94	44.819	ENSHGLG00000003649	TRNT1	93	44.819	Heterocephalus_glaber_female
WBGene00010089	hpo-31	92	41.951	ENSHGLG00000000221	-	91	41.951	Heterocephalus_glaber_female
WBGene00010089	hpo-31	94	43.914	ENSHGLG00100016421	TRNT1	81	60.571	Heterocephalus_glaber_male
WBGene00010089	hpo-31	93	44.769	ENSHCOG00000010618	trnt1	94	44.769	Hippocampus_comes
WBGene00010089	hpo-31	93	43.521	ENSIPUG00000000971	trnt1	93	43.521	Ictalurus_punctatus
WBGene00010089	hpo-31	95	43.868	ENSSTOG00000000150	TRNT1	85	63.636	Ictidomys_tridecemlineatus
WBGene00010089	hpo-31	94	44.181	ENSJJAG00000018561	Trnt1	93	44.181	Jaculus_jaculus
WBGene00010089	hpo-31	94	43.855	ENSKMAG00000011307	trnt1	95	43.855	Kryptolebias_marmoratus
WBGene00010089	hpo-31	93	42.615	ENSLBEG00000019457	trnt1	94	42.615	Labrus_bergylta
WBGene00010089	hpo-31	93	44.039	ENSLACG00000013227	TRNT1	92	44.039	Latimeria_chalumnae
WBGene00010089	hpo-31	94	42.961	ENSLOCG00000011105	trnt1	92	42.961	Lepisosteus_oculatus
WBGene00010089	hpo-31	94	44.630	ENSLAFG00000023191	TRNT1	93	44.630	Loxodonta_africana
WBGene00010089	hpo-31	94	44.391	ENSMFAG00000045113	TRNT1	92	44.391	Macaca_fascicularis
WBGene00010089	hpo-31	94	44.391	ENSMMUG00000017983	TRNT1	92	44.391	Macaca_mulatta
WBGene00010089	hpo-31	94	44.391	ENSMNEG00000037805	TRNT1	92	44.391	Macaca_nemestrina
WBGene00010089	hpo-31	89	44.584	ENSMLEG00000033671	TRNT1	99	44.584	Mandrillus_leucophaeus
WBGene00010089	hpo-31	94	44.819	ENSMAMG00000023401	trnt1	95	44.819	Mastacembelus_armatus
WBGene00010089	hpo-31	94	43.301	ENSMZEG00005009141	trnt1	95	43.301	Maylandia_zebra
WBGene00010089	hpo-31	72	40.061	ENSMGAG00000009971	TRNT1	97	40.061	Meleagris_gallopavo
WBGene00010089	hpo-31	94	43.705	ENSMAUG00000020707	Trnt1	94	43.705	Mesocricetus_auratus
WBGene00010089	hpo-31	94	44.391	ENSMICG00000016615	TRNT1	93	44.391	Microcebus_murinus
WBGene00010089	hpo-31	94	43.943	ENSMOCG00000004539	Trnt1	94	43.943	Microtus_ochrogaster
WBGene00010089	hpo-31	94	43.614	ENSMMOG00000010742	trnt1	95	43.614	Mola_mola
WBGene00010089	hpo-31	94	44.181	ENSMODG00000004368	TRNT1	94	44.181	Monodelphis_domestica
WBGene00010089	hpo-31	94	41.205	ENSMALG00000008376	trnt1	94	41.205	Monopterus_albus
WBGene00010089	hpo-31	94	44.418	MGP_CAROLIEiJ_G0028698	Trnt1	81	63.636	Mus_caroli
WBGene00010089	hpo-31	94	44.181	ENSMUSG00000013736	Trnt1	81	63.636	Mus_musculus
WBGene00010089	hpo-31	94	44.418	MGP_PahariEiJ_G0022449	Trnt1	86	63.636	Mus_pahari
WBGene00010089	hpo-31	94	44.181	MGP_SPRETEiJ_G0029726	Trnt1	81	63.636	Mus_spretus
WBGene00010089	hpo-31	95	44.313	ENSMPUG00000017017	TRNT1	93	44.313	Mustela_putorius_furo
WBGene00010089	hpo-31	90	43.250	ENSMLUG00000011864	TRNT1	99	43.250	Myotis_lucifugus
WBGene00010089	hpo-31	94	43.468	ENSNGAG00000000537	Trnt1	80	62.147	Nannospalax_galili
WBGene00010089	hpo-31	72	49.841	ENSNBRG00000023606	trnt1	89	49.841	Neolamprologus_brichardi
WBGene00010089	hpo-31	94	44.181	ENSNLEG00000003226	TRNT1	94	44.181	Nomascus_leucogenys
WBGene00010089	hpo-31	94	43.405	ENSMEUG00000004684	TRNT1	94	43.405	Notamacropus_eugenii
WBGene00010089	hpo-31	88	42.416	ENSOPRG00000015067	TRNT1	98	42.416	Ochotona_princeps
WBGene00010089	hpo-31	94	44.153	ENSODEG00000007597	TRNT1	93	44.153	Octodon_degus
WBGene00010089	hpo-31	94	43.780	ENSONIG00000020273	trnt1	93	43.780	Oreochromis_niloticus
WBGene00010089	hpo-31	94	42.788	ENSOANG00000007514	TRNT1	94	42.788	Ornithorhynchus_anatinus
WBGene00010089	hpo-31	95	42.654	ENSOCUG00000008580	TRNT1	94	42.654	Oryctolagus_cuniculus
WBGene00010089	hpo-31	94	43.614	ENSORLG00000003165	trnt1	96	43.614	Oryzias_latipes
WBGene00010089	hpo-31	94	43.373	ENSORLG00020022060	trnt1	96	43.373	Oryzias_latipes_hni
WBGene00010089	hpo-31	94	43.373	ENSORLG00015018915	trnt1	95	43.373	Oryzias_latipes_hsok
WBGene00010089	hpo-31	94	43.614	ENSOMEG00000003331	trnt1	96	43.614	Oryzias_melastigma
WBGene00010089	hpo-31	94	44.181	ENSOARG00000008631	TRNT1	93	44.181	Ovis_aries
WBGene00010089	hpo-31	94	43.943	ENSPPAG00000043566	TRNT1	94	43.943	Pan_paniscus
WBGene00010089	hpo-31	95	44.313	ENSPPRG00000001327	TRNT1	93	44.313	Panthera_pardus
WBGene00010089	hpo-31	95	44.550	ENSPTIG00000011448	TRNT1	93	44.550	Panthera_tigris_altaica
WBGene00010089	hpo-31	94	44.181	ENSPTRG00000014564	TRNT1	94	44.181	Pan_troglodytes
WBGene00010089	hpo-31	94	44.391	ENSPANG00000025944	TRNT1	92	44.391	Papio_anubis
WBGene00010089	hpo-31	94	43.165	ENSPKIG00000020015	trnt1	94	43.165	Paramormyrops_kingsleyae
WBGene00010089	hpo-31	92	44.794	ENSPSIG00000017356	TRNT1	100	44.794	Pelodiscus_sinensis
WBGene00010089	hpo-31	94	44.578	ENSPMGG00000008888	trnt1	93	44.578	Periophthalmus_magnuspinnatus
WBGene00010089	hpo-31	94	44.181	ENSPEMG00000019845	Trnt1	94	44.181	Peromyscus_maniculatus_bairdii
WBGene00010089	hpo-31	94	43.468	ENSPCIG00000030436	TRNT1	94	43.468	Phascolarctos_cinereus
WBGene00010089	hpo-31	94	43.373	ENSPFOG00000006194	trnt1	95	43.373	Poecilia_formosa
WBGene00010089	hpo-31	94	43.373	ENSPLAG00000015623	trnt1	99	43.237	Poecilia_latipinna
WBGene00010089	hpo-31	94	43.373	ENSPMEG00000012216	trnt1	99	43.237	Poecilia_mexicana
WBGene00010089	hpo-31	94	42.892	ENSPREG00000021470	trnt1	95	42.892	Poecilia_reticulata
WBGene00010089	hpo-31	94	43.705	ENSPPYG00000013702	TRNT1	94	43.705	Pongo_abelii
WBGene00010089	hpo-31	89	44.584	ENSPCAG00000001951	TRNT1	99	44.584	Procavia_capensis
WBGene00010089	hpo-31	94	44.391	ENSPCOG00000022228	TRNT1	93	44.391	Propithecus_coquereli
WBGene00010089	hpo-31	89	42.857	ENSPVAG00000008784	TRNT1	100	42.857	Pteropus_vampyrus
WBGene00010089	hpo-31	94	43.541	ENSPNYG00000003120	trnt1	95	43.541	Pundamilia_nyererei
WBGene00010089	hpo-31	93	44.118	ENSPNAG00000000565	trnt1	93	44.118	Pygocentrus_nattereri
WBGene00010089	hpo-31	94	43.705	ENSRNOG00000006432	Trnt1	94	43.705	Rattus_norvegicus
WBGene00010089	hpo-31	94	43.990	ENSRBIG00000042632	TRNT1	93	43.990	Rhinopithecus_bieti
WBGene00010089	hpo-31	94	43.705	ENSRROG00000036866	TRNT1	94	43.705	Rhinopithecus_roxellana
WBGene00010089	hpo-31	94	43.705	ENSSBOG00000021208	TRNT1	94	43.705	Saimiri_boliviensis_boliviensis
WBGene00010089	hpo-31	94	42.755	ENSSHAG00000018861	TRNT1	94	42.755	Sarcophilus_harrisii
WBGene00010089	hpo-31	94	43.341	ENSSFOG00015020844	trnt1	93	43.341	Scleropages_formosus
WBGene00010089	hpo-31	94	43.373	ENSSMAG00000015432	trnt1	93	43.373	Scophthalmus_maximus
WBGene00010089	hpo-31	94	43.826	ENSSDUG00000012320	trnt1	95	43.826	Seriola_dumerili
WBGene00010089	hpo-31	94	44.068	ENSSLDG00000009325	trnt1	95	44.068	Seriola_lalandi_dorsalis
WBGene00010089	hpo-31	89	43.750	ENSSPUG00000014153	TRNT1	99	43.750	Sphenodon_punctatus
WBGene00010089	hpo-31	94	43.204	ENSSPAG00000021005	trnt1	95	43.204	Stegastes_partitus
WBGene00010089	hpo-31	94	43.780	ENSSSCG00000011529	TRNT1	94	43.780	Sus_scrofa
WBGene00010089	hpo-31	93	42.927	ENSTGUG00000010192	TRNT1	99	42.927	Taeniopygia_guttata
WBGene00010089	hpo-31	94	45.521	ENSTRUG00000001088	trnt1	95	45.521	Takifugu_rubripes
WBGene00010089	hpo-31	94	43.373	ENSTNIG00000007363	trnt1	93	43.373	Tetraodon_nigroviridis
WBGene00010089	hpo-31	55	47.718	ENSTBEG00000006367	TRNT1	79	47.718	Tupaia_belangeri
WBGene00010089	hpo-31	94	42.755	ENSTTRG00000007803	TRNT1	94	42.755	Tursiops_truncatus
WBGene00010089	hpo-31	95	44.787	ENSUAMG00000022574	TRNT1	93	44.787	Ursus_americanus
WBGene00010089	hpo-31	95	44.787	ENSUMAG00000024092	TRNT1	93	44.787	Ursus_maritimus
WBGene00010089	hpo-31	95	44.076	ENSVVUG00000012810	TRNT1	93	44.076	Vulpes_vulpes
WBGene00010089	hpo-31	94	42.373	ENSXETG00000025091	trnt1	99	42.476	Xenopus_tropicalis
WBGene00010089	hpo-31	94	43.133	ENSXCOG00000010150	trnt1	95	43.133	Xiphophorus_couchianus
WBGene00010089	hpo-31	94	43.133	ENSXMAG00000002227	trnt1	95	43.133	Xiphophorus_maculatus