EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00010094 (Gene tree)
Gene ID: -
Gene Symbol: tsfm-1
Alias: -
Full Name: Elongation factor Ts%2C mitochondrial
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 1281 bases
Position: chrV:12270271-12271551
Accession: Q20819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F55C5	EF_TS	PF00889.19	1.1e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F55C5.5	-	1096	NM_073678	F55C5.5	316 (aa)	NP_506079	Q20819

Gene Model

Click here to download WBGene00010094's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00010094's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00010094	tsfm-1	90	32.765	ENSG00000123297	TSFM	95	40.741	Homo_sapiens
WBGene00010094	tsfm-1	97	33.866	ENSAPOG00000014844	tsfm	90	33.866	Acanthochromis_polyacanthus
WBGene00010094	tsfm-1	90	33.788	ENSAMEG00000005452	TSFM	83	34.007	Ailuropoda_melanoleuca
WBGene00010094	tsfm-1	91	34.694	ENSACIG00000001066	tsfm	86	34.694	Amphilophus_citrinellus
WBGene00010094	tsfm-1	97	33.548	ENSAOCG00000007132	tsfm	90	33.548	Amphiprion_ocellaris
WBGene00010094	tsfm-1	91	33.333	ENSAPEG00000015755	tsfm	86	33.333	Amphiprion_percula
WBGene00010094	tsfm-1	91	33.333	ENSATEG00000001497	tsfm	86	33.333	Anabas_testudineus
WBGene00010094	tsfm-1	92	35.099	ENSACAG00000013044	TSFM	85	35.099	Anolis_carolinensis
WBGene00010094	tsfm-1	90	34.130	ENSANAG00000038019	TSFM	84	33.542	Aotus_nancymaae
WBGene00010094	tsfm-1	91	36.770	ENSACLG00000000139	tsfm	86	36.770	Astatotilapia_calliptera
WBGene00010094	tsfm-1	91	35.294	ENSAMXG00000001713	tsfm	87	35.294	Astyanax_mexicanus
WBGene00010094	tsfm-1	91	33.113	ENSBTAG00000016912	TSFM	71	33.333	Bos_taurus
WBGene00010094	tsfm-1	90	33.106	ENSCJAG00000006600	TSFM	83	33.333	Callithrix_jacchus
WBGene00010094	tsfm-1	90	33.447	ENSCAFG00000000293	-	84	33.670	Canis_familiaris
WBGene00010094	tsfm-1	90	33.447	ENSCAFG00020022844	TSFM	66	33.670	Canis_lupus_dingo
WBGene00010094	tsfm-1	91	33.113	ENSCHIG00000013850	TSFM	85	33.333	Capra_hircus
WBGene00010094	tsfm-1	90	33.106	ENSCPOG00000037732	TSFM	83	33.670	Cavia_porcellus
WBGene00010094	tsfm-1	90	33.447	ENSCCAG00000033254	TSFM	83	33.670	Cebus_capucinus
WBGene00010094	tsfm-1	90	33.110	ENSCATG00000016867	TSFM	83	33.663	Cercocebus_atys
WBGene00010094	tsfm-1	90	31.987	ENSCLAG00000009226	TSFM	83	32.226	Chinchilla_lanigera
WBGene00010094	tsfm-1	90	32.776	ENSCSAG00000004601	TSFM	83	33.333	Chlorocebus_sabaeus
WBGene00010094	tsfm-1	92	34.314	ENSCPBG00000018147	TSFM	83	34.314	Chrysemys_picta_bellii
WBGene00010094	tsfm-1	94	30.945	ENSCING00000001275	-	91	30.945	Ciona_intestinalis
WBGene00010094	tsfm-1	66	31.776	ENSCSAVG00000007722	-	99	31.776	Ciona_savignyi
WBGene00010094	tsfm-1	91	33.113	ENSCGRG00001023000	TSFM	83	33.444	Cricetulus_griseus_chok1gshd
WBGene00010094	tsfm-1	91	33.113	ENSCGRG00000006566	TSFM	83	33.444	Cricetulus_griseus_crigri
WBGene00010094	tsfm-1	81	31.154	ENSCSEG00000003376	tsfm	82	31.154	Cynoglossus_semilaevis
WBGene00010094	tsfm-1	97	35.161	ENSCVAG00000001340	tsfm	91	35.161	Cyprinodon_variegatus
WBGene00010094	tsfm-1	91	34.589	ENSDARG00000060748	tsfm	87	34.589	Danio_rerio
WBGene00010094	tsfm-1	90	34.114	ENSDNOG00000049415	TSFM	83	34.653	Dasypus_novemcinctus
WBGene00010094	tsfm-1	80	31.298	ENSDORG00000007272	Tsfm	89	31.298	Dipodomys_ordii
WBGene00010094	tsfm-1	99	33.333	FBgn0032646	mEFTs	94	33.333	Drosophila_melanogaster
WBGene00010094	tsfm-1	91	34.551	ENSETEG00000002686	-	83	34.653	Echinops_telfairi
WBGene00010094	tsfm-1	90	33.673	ENSEASG00005007292	TSFM	66	33.893	Equus_asinus_asinus
WBGene00010094	tsfm-1	90	33.673	ENSECAG00000010520	TSFM	74	33.893	Equus_caballus
WBGene00010094	tsfm-1	89	35.088	ENSELUG00000015481	tsfm	86	35.616	Esox_lucius
WBGene00010094	tsfm-1	90	32.993	ENSFCAG00000023794	TSFM	83	33.221	Felis_catus
WBGene00010094	tsfm-1	91	34.868	ENSFDAG00000016548	TSFM	83	34.868	Fukomys_damarensis
WBGene00010094	tsfm-1	97	35.806	ENSFHEG00000013458	tsfm	91	35.806	Fundulus_heteroclitus
WBGene00010094	tsfm-1	92	34.694	ENSGMOG00000000868	tsfm	92	34.694	Gadus_morhua
WBGene00010094	tsfm-1	91	34.708	ENSGAFG00000021764	tsfm	86	34.708	Gambusia_affinis
WBGene00010094	tsfm-1	97	33.546	ENSGACG00000000697	tsfm	93	33.546	Gasterosteus_aculeatus
WBGene00010094	tsfm-1	92	33.887	ENSGAGG00000020897	TSFM	82	33.887	Gopherus_agassizii
WBGene00010094	tsfm-1	90	32.765	ENSGGOG00000001415	TSFM	83	32.997	Gorilla_gorilla
WBGene00010094	tsfm-1	91	36.426	ENSHBUG00000021738	tsfm	86	36.426	Haplochromis_burtoni
WBGene00010094	tsfm-1	91	34.564	ENSHGLG00000008559	TSFM	83	34.564	Heterocephalus_glaber_female
WBGene00010094	tsfm-1	91	34.564	ENSHGLG00100005643	TSFM	83	34.564	Heterocephalus_glaber_male
WBGene00010094	tsfm-1	96	36.156	ENSHCOG00000021049	tsfm	91	36.156	Hippocampus_comes
WBGene00010094	tsfm-1	91	33.113	ENSSTOG00000001159	TSFM	83	33.333	Ictidomys_tridecemlineatus
WBGene00010094	tsfm-1	92	33.882	ENSJJAG00000012907	Tsfm	84	33.882	Jaculus_jaculus
WBGene00010094	tsfm-1	91	34.915	ENSKMAG00000018906	tsfm	86	34.915	Kryptolebias_marmoratus
WBGene00010094	tsfm-1	95	33.876	ENSLBEG00000019779	tsfm	89	33.876	Labrus_bergylta
WBGene00010094	tsfm-1	97	36.991	ENSLACG00000018125	TSFM	89	36.991	Latimeria_chalumnae
WBGene00010094	tsfm-1	91	31.757	ENSLOCG00000006608	tsfm	85	31.293	Lepisosteus_oculatus
WBGene00010094	tsfm-1	91	33.557	ENSLAFG00000015177	TSFM	83	33.557	Loxodonta_africana
WBGene00010094	tsfm-1	90	33.110	ENSMFAG00000036132	TSFM	83	33.663	Macaca_fascicularis
WBGene00010094	tsfm-1	90	33.110	ENSMMUG00000005893	TSFM	83	33.663	Macaca_mulatta
WBGene00010094	tsfm-1	90	33.110	ENSMNEG00000026351	TSFM	83	33.663	Macaca_nemestrina
WBGene00010094	tsfm-1	90	33.110	ENSMLEG00000029811	TSFM	83	33.663	Mandrillus_leucophaeus
WBGene00010094	tsfm-1	95	34.868	ENSMAMG00000002230	tsfm	91	34.868	Mastacembelus_armatus
WBGene00010094	tsfm-1	91	36.426	ENSMZEG00005008170	tsfm	86	36.426	Maylandia_zebra
WBGene00010094	tsfm-1	91	34.551	ENSMAUG00000011705	Tsfm	83	34.768	Mesocricetus_auratus
WBGene00010094	tsfm-1	90	32.215	ENSMICG00000003812	TSFM	83	32.673	Microcebus_murinus
WBGene00010094	tsfm-1	91	33.108	ENSMOCG00000006104	Tsfm	84	33.108	Microtus_ochrogaster
WBGene00010094	tsfm-1	97	35.806	ENSMMOG00000021854	tsfm	90	35.806	Mola_mola
WBGene00010094	tsfm-1	97	31.646	ENSMODG00000021351	TSFM	87	31.646	Monodelphis_domestica
WBGene00010094	tsfm-1	97	35.370	ENSMALG00000015046	tsfm	90	35.370	Monopterus_albus
WBGene00010094	tsfm-1	92	34.000	MGP_CAROLIEiJ_G0015873	Tsfm	84	34.000	Mus_caroli
WBGene00010094	tsfm-1	92	34.000	ENSMUSG00000040521	Tsfm	84	34.000	Mus_musculus
WBGene00010094	tsfm-1	92	34.333	MGP_PahariEiJ_G0031212	Tsfm	84	34.333	Mus_pahari
WBGene00010094	tsfm-1	92	34.000	MGP_SPRETEiJ_G0016699	Tsfm	84	34.000	Mus_spretus
WBGene00010094	tsfm-1	90	33.445	ENSMPUG00000002051	TSFM	84	33.670	Mustela_putorius_furo
WBGene00010094	tsfm-1	90	33.445	ENSMLUG00000005940	TSFM	85	34.098	Myotis_lucifugus
WBGene00010094	tsfm-1	91	33.113	ENSNGAG00000014356	Tsfm	83	33.333	Nannospalax_galili
WBGene00010094	tsfm-1	97	36.452	ENSNBRG00000016413	tsfm	91	36.452	Neolamprologus_brichardi
WBGene00010094	tsfm-1	90	32.776	ENSNLEG00000017178	TSFM	83	33.333	Nomascus_leucogenys
WBGene00010094	tsfm-1	71	50.000	ENSMEUG00000004047	TSFM	60	50.000	Notamacropus_eugenii
WBGene00010094	tsfm-1	91	31.013	ENSOPRG00000006670	TSFM	84	31.132	Ochotona_princeps
WBGene00010094	tsfm-1	91	34.868	ENSODEG00000001882	TSFM	83	34.868	Octodon_degus
WBGene00010094	tsfm-1	95	34.304	ENSONIG00000019100	tsfm	88	34.304	Oreochromis_niloticus
WBGene00010094	tsfm-1	84	32.432	ENSOCUG00000012512	TSFM	63	32.432	Oryctolagus_cuniculus
WBGene00010094	tsfm-1	91	35.616	ENSORLG00000030201	tsfm	86	35.616	Oryzias_latipes
WBGene00010094	tsfm-1	91	35.959	ENSORLG00020004740	tsfm	86	35.959	Oryzias_latipes_hni
WBGene00010094	tsfm-1	91	35.616	ENSORLG00015022703	tsfm	87	35.354	Oryzias_latipes_hsok
WBGene00010094	tsfm-1	91	35.395	ENSOMEG00000008934	tsfm	84	35.395	Oryzias_melastigma
WBGene00010094	tsfm-1	91	33.221	ENSOGAG00000012235	TSFM	83	33.221	Otolemur_garnettii
WBGene00010094	tsfm-1	91	33.446	ENSOARG00000005095	TSFM	80	33.663	Ovis_aries
WBGene00010094	tsfm-1	90	32.423	ENSPPAG00000043428	TSFM	83	32.660	Pan_paniscus
WBGene00010094	tsfm-1	90	32.993	ENSPPRG00000009667	TSFM	83	33.221	Panthera_pardus
WBGene00010094	tsfm-1	90	33.333	ENSPTIG00000015290	TSFM	83	33.557	Panthera_tigris_altaica
WBGene00010094	tsfm-1	90	32.423	ENSPTRG00000005152	TSFM	83	32.660	Pan_troglodytes
WBGene00010094	tsfm-1	90	33.110	ENSPANG00000007866	TSFM	83	33.333	Papio_anubis
WBGene00010094	tsfm-1	96	35.484	ENSPKIG00000008495	tsfm	88	35.484	Paramormyrops_kingsleyae
WBGene00010094	tsfm-1	91	34.708	ENSPMGG00000007022	tsfm	87	34.708	Periophthalmus_magnuspinnatus
WBGene00010094	tsfm-1	91	32.558	ENSPEMG00000000414	Tsfm	84	32.781	Peromyscus_maniculatus_bairdii
WBGene00010094	tsfm-1	93	33.553	ENSPCIG00000023619	TSFM	87	33.553	Phascolarctos_cinereus
WBGene00010094	tsfm-1	89	32.746	ENSPFOG00000010782	tsfm	86	32.990	Poecilia_formosa
WBGene00010094	tsfm-1	89	33.451	ENSPLAG00000008105	tsfm	86	33.677	Poecilia_latipinna
WBGene00010094	tsfm-1	89	32.990	ENSPMEG00000002567	tsfm	86	33.221	Poecilia_mexicana
WBGene00010094	tsfm-1	89	32.746	ENSPREG00000016696	tsfm	86	32.990	Poecilia_reticulata
WBGene00010094	tsfm-1	90	32.765	ENSPPYG00000004708	TSFM	71	32.997	Pongo_abelii
WBGene00010094	tsfm-1	91	33.010	ENSPCAG00000003789	TSFM	84	33.010	Procavia_capensis
WBGene00010094	tsfm-1	90	33.667	ENSPCOG00000021606	TSFM	83	33.663	Propithecus_coquereli
WBGene00010094	tsfm-1	90	34.448	ENSPVAG00000012141	TSFM	83	34.653	Pteropus_vampyrus
WBGene00010094	tsfm-1	91	36.426	ENSPNYG00000001230	tsfm	86	36.426	Pundamilia_nyererei
WBGene00010094	tsfm-1	91	34.247	ENSPNAG00000003241	tsfm	87	34.247	Pygocentrus_nattereri
WBGene00010094	tsfm-1	68	34.703	ENSRNOG00000048843	Tsfm	68	35.111	Rattus_norvegicus
WBGene00010094	tsfm-1	90	32.776	ENSRBIG00000037278	TSFM	83	33.333	Rhinopithecus_bieti
WBGene00010094	tsfm-1	90	32.776	ENSRROG00000031769	TSFM	83	33.333	Rhinopithecus_roxellana
WBGene00010094	tsfm-1	90	31.973	ENSSBOG00000021465	TSFM	82	32.215	Saimiri_boliviensis_boliviensis
WBGene00010094	tsfm-1	94	31.250	ENSSHAG00000009664	TSFM	81	31.250	Sarcophilus_harrisii
WBGene00010094	tsfm-1	97	35.144	ENSSFOG00015014457	tsfm	91	35.144	Scleropages_formosus
WBGene00010094	tsfm-1	99	34.268	ENSSMAG00000002467	tsfm	93	34.268	Scophthalmus_maximus
WBGene00010094	tsfm-1	91	34.932	ENSSDUG00000006833	tsfm	86	34.932	Seriola_dumerili
WBGene00010094	tsfm-1	91	34.589	ENSSLDG00000000715	tsfm	85	34.589	Seriola_lalandi_dorsalis
WBGene00010094	tsfm-1	91	33.898	ENSSPUG00000006435	TSFM	97	33.898	Sphenodon_punctatus
WBGene00010094	tsfm-1	97	34.921	ENSSPAG00000002548	tsfm	90	34.921	Stegastes_partitus
WBGene00010094	tsfm-1	91	33.670	ENSSSCG00000037767	TSFM	71	33.779	Sus_scrofa
WBGene00010094	tsfm-1	97	37.013	ENSTRUG00000003081	tsfm	92	37.338	Takifugu_rubripes
WBGene00010094	tsfm-1	91	35.739	ENSTNIG00000014578	tsfm	87	35.739	Tetraodon_nigroviridis
WBGene00010094	tsfm-1	77	50.000	ENSTBEG00000011603	TSFM	65	50.000	Tupaia_belangeri
WBGene00010094	tsfm-1	91	34.323	ENSTTRG00000008351	TSFM	83	34.323	Tursiops_truncatus
WBGene00010094	tsfm-1	90	33.445	ENSUAMG00000013142	TSFM	83	33.993	Ursus_americanus
WBGene00010094	tsfm-1	90	33.788	ENSUMAG00000020123	TSFM	83	34.007	Ursus_maritimus
WBGene00010094	tsfm-1	70	52.632	ENSVPAG00000000209	TSFM	61	52.632	Vicugna_pacos
WBGene00010094	tsfm-1	95	33.225	ENSVVUG00000016735	TSFM	96	31.611	Vulpes_vulpes
WBGene00010094	tsfm-1	97	34.713	ENSXETG00000009653	tsfm	97	34.713	Xenopus_tropicalis
WBGene00010094	tsfm-1	91	34.021	ENSXMAG00000018468	tsfm	86	34.021	Xiphophorus_maculatus