EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00010260 (Gene tree)
Gene ID: -
Gene Symbol: ddx-17
Alias: -
Full Name: DEAD boX helicase homolog
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 3451 bases
Position: chrV:14008768-14012218
Accession: Q9XUW5
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F58E10	DEAD	PF00270.29	2.5e-50	1	1
F58E10	DEAD	PF00270.29	2.5e-50	1	1
F58E10	DEAD	PF00270.29	2.5e-50	1	1
F58E10	DEAD	PF00270.29	2.5e-50	1	1
F58E10	DEAD	PF00270.29	2.5e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F58E10.3b	-	1992	NR_003170	-	- (aa)	-	-
F58E10.3a.4	-	2123	NM_001047669	F58E10.3a.4	561 (aa)	NP_001041134	Q9XUW5
F58E10.3a.5	-	2069	NM_001047669	F58E10.3a.5	561 (aa)	NP_001041134	Q9XUW5
F58E10.3a.1	-	2420	-	F58E10.3a.1	561 (aa)	-	Q9XUW5
F58E10.3a.2	-	2254	NM_001047669	F58E10.3a.2	561 (aa)	NP_001041134	Q9XUW5
F58E10.3a.3	-	2143	NM_001047669	F58E10.3a.3	561 (aa)	NP_001041134	Q9XUW5

Gene Model

Click here to download WBGene00010260's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00010260's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00010260	ddx-17	73	34.532	WBGene00012059	T26G10.1	71	38.028
WBGene00010260	ddx-17	83	40.042	WBGene00018776	F53H1.1	62	40.471
WBGene00010260	ddx-17	61	33.721	WBGene00001840	hel-1	79	33.721
WBGene00010260	ddx-17	70	36.341	WBGene00001598	glh-1	54	36.341
WBGene00010260	ddx-17	57	32.941	WBGene00015232	B0511.6	59	32.941
WBGene00010260	ddx-17	84	37.195	WBGene00013214	Y54G11A.3	84	39.720
WBGene00010260	ddx-17	64	31.522	WBGene00019219	H20J04.4	74	31.250
WBGene00010260	ddx-17	74	34.703	WBGene00001600	glh-3	60	34.396
WBGene00010260	ddx-17	81	36.966	WBGene00019245	sacy-1	67	38.426
WBGene00010260	ddx-17	91	37.925	WBGene00002244	laf-1	67	41.591
WBGene00010260	ddx-17	67	34.121	WBGene00002083	inf-1	93	34.115
WBGene00010260	ddx-17	82	38.578	WBGene00008119	C46F11.4	57	38.578
WBGene00010260	ddx-17	86	39.479	WBGene00006888	vbh-1	71	40.252
WBGene00010260	ddx-17	65	34.615	WBGene00022029	Y65B4A.6	98	34.859
WBGene00010260	ddx-17	68	39.806	WBGene00017162	ddx-23	56	39.806
WBGene00010260	ddx-17	65	34.615	WBGene00018007	F33D11.10	89	34.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00010260	ddx-17	79	60.497	ENSG00000100201	DDX17	71	72.500	Homo_sapiens
WBGene00010260	ddx-17	81	58.720	ENSAPOG00000017303	si:dkey-156n14.5	71	58.315	Acanthochromis_polyacanthus
WBGene00010260	ddx-17	79	60.497	ENSAMEG00000010601	DDX17	61	60.045	Ailuropoda_melanoleuca
WBGene00010260	ddx-17	81	58.940	ENSAOCG00000004874	si:dkey-156n14.5	70	58.099	Amphiprion_ocellaris
WBGene00010260	ddx-17	81	58.720	ENSAPEG00000018317	si:dkey-156n14.5	70	58.206	Amphiprion_percula
WBGene00010260	ddx-17	82	57.325	ENSATEG00000021733	si:dkey-156n14.5	72	59.202	Anabas_testudineus
WBGene00010260	ddx-17	81	59.211	ENSAPLG00000014334	-	75	59.081	Anas_platyrhynchos
WBGene00010260	ddx-17	72	62.010	ENSANAG00000035052	DDX17	67	61.337	Aotus_nancymaae
WBGene00010260	ddx-17	81	59.382	ENSACLG00000015887	si:dkey-156n14.5	70	58.747	Astatotilapia_calliptera
WBGene00010260	ddx-17	81	59.121	ENSACLG00000015882	DDX17	72	59.911	Astatotilapia_calliptera
WBGene00010260	ddx-17	79	60.497	ENSBTAG00000009887	DDX17	88	60.109	Bos_taurus
WBGene00010260	ddx-17	82	59.179	ENSCJAG00000011797	DDX17	86	60.109	Callithrix_jacchus
WBGene00010260	ddx-17	79	60.497	ENSCAFG00000001395	DDX17	69	60.045	Canis_familiaris
WBGene00010260	ddx-17	84	58.403	ENSCAFG00020002867	DDX17	88	60.109	Canis_lupus_dingo
WBGene00010260	ddx-17	79	60.497	ENSCHIG00000021332	DDX17	88	60.109	Capra_hircus
WBGene00010260	ddx-17	83	58.849	ENSTSYG00000001303	DDX17	91	60.109	Carlito_syrichta
WBGene00010260	ddx-17	79	60.497	ENSCPOG00000011790	DDX17	88	60.109	Cavia_porcellus
WBGene00010260	ddx-17	79	60.497	ENSCCAG00000024116	DDX17	89	60.109	Cebus_capucinus
WBGene00010260	ddx-17	79	60.497	ENSCATG00000035701	DDX17	88	60.109	Cercocebus_atys
WBGene00010260	ddx-17	79	60.497	ENSCLAG00000017294	DDX17	88	60.109	Chinchilla_lanigera
WBGene00010260	ddx-17	79	60.497	ENSCSAG00000006649	DDX17	69	60.045	Chlorocebus_sabaeus
WBGene00010260	ddx-17	79	60.497	ENSCHOG00000001931	DDX17	62	59.519	Choloepus_hoffmanni
WBGene00010260	ddx-17	87	44.356	ENSCING00000008750	-	75	47.786	Ciona_intestinalis
WBGene00010260	ddx-17	80	57.589	ENSCING00000004147	-	82	56.838	Ciona_intestinalis
WBGene00010260	ddx-17	79	60.497	ENSCANG00000002348	DDX17	88	60.109	Colobus_angolensis_palliatus
WBGene00010260	ddx-17	79	60.497	ENSCGRG00001023050	Ddx17	69	60.045	Cricetulus_griseus_chok1gshd
WBGene00010260	ddx-17	79	60.497	ENSCGRG00000007756	Ddx17	69	60.045	Cricetulus_griseus_crigri
WBGene00010260	ddx-17	68	58.901	ENSCSEG00000011351	si:dkey-156n14.5	88	59.726	Cynoglossus_semilaevis
WBGene00010260	ddx-17	78	59.453	ENSCVAG00000010921	si:dkey-156n14.5	70	57.667	Cyprinodon_variegatus
WBGene00010260	ddx-17	79	60.181	ENSDARG00000010873	DDX17	89	59.726	Danio_rerio
WBGene00010260	ddx-17	79	60.497	ENSDNOG00000006499	DDX17	61	60.045	Dasypus_novemcinctus
WBGene00010260	ddx-17	79	60.497	ENSDORG00000003358	Ddx17	69	60.045	Dipodomys_ordii
WBGene00010260	ddx-17	81	59.031	FBgn0035720	CG10077	77	57.260	Drosophila_melanogaster
WBGene00010260	ddx-17	79	60.497	ENSEASG00005018767	DDX17	69	60.045	Equus_asinus_asinus
WBGene00010260	ddx-17	79	60.497	ENSECAG00000025110	DDX17	88	60.109	Equus_caballus
WBGene00010260	ddx-17	79	60.497	ENSFCAG00000031570	DDX17	88	60.109	Felis_catus
WBGene00010260	ddx-17	79	60.045	ENSFALG00000012560	DDX17	61	59.081	Ficedula_albicollis
WBGene00010260	ddx-17	81	59.519	ENSFDAG00000009967	DDX17	71	60.045	Fukomys_damarensis
WBGene00010260	ddx-17	79	60.045	ENSGALG00000037360	DDX17	69	59.081	Gallus_gallus
WBGene00010260	ddx-17	81	51.386	ENSGACG00000019151	si:dkey-156n14.5	74	51.606	Gasterosteus_aculeatus
WBGene00010260	ddx-17	81	59.519	ENSGGOG00000008309	DDX17	88	60.109	Gorilla_gorilla
WBGene00010260	ddx-17	81	59.603	ENSHBUG00000021303	si:dkey-156n14.5	70	58.963	Haplochromis_burtoni
WBGene00010260	ddx-17	81	59.121	ENSHBUG00000022268	DDX17	72	59.911	Haplochromis_burtoni
WBGene00010260	ddx-17	79	60.497	ENSHGLG00000012568	DDX17	61	60.045	Heterocephalus_glaber_female
WBGene00010260	ddx-17	79	60.497	ENSHGLG00100011291	DDX17	88	60.109	Heterocephalus_glaber_male
WBGene00010260	ddx-17	83	59.013	ENSIPUG00000015768	si:dkey-156n14.5	91	60.000	Ictalurus_punctatus
WBGene00010260	ddx-17	79	60.497	ENSSTOG00000013699	DDX17	61	60.045	Ictidomys_tridecemlineatus
WBGene00010260	ddx-17	79	60.497	ENSJJAG00000011350	Ddx17	62	59.519	Jaculus_jaculus
WBGene00010260	ddx-17	79	60.497	ENSMFAG00000046051	DDX17	88	60.109	Macaca_fascicularis
WBGene00010260	ddx-17	79	60.497	ENSMMUG00000004304	DDX17	88	60.109	Macaca_mulatta
WBGene00010260	ddx-17	79	60.497	ENSMNEG00000022218	DDX17	88	60.109	Macaca_nemestrina
WBGene00010260	ddx-17	84	58.475	ENSMLEG00000029141	DDX17	88	60.109	Mandrillus_leucophaeus
WBGene00010260	ddx-17	78	58.864	ENSMAMG00000008427	si:dkey-156n14.5	70	56.466	Mastacembelus_armatus
WBGene00010260	ddx-17	81	59.382	ENSMZEG00005009937	si:dkey-156n14.5	70	58.747	Maylandia_zebra
WBGene00010260	ddx-17	81	59.211	ENSMGAG00000012423	DDX17	84	62.069	Meleagris_gallopavo
WBGene00010260	ddx-17	62	52.707	ENSMAUG00000020476	Ddx17	83	52.754	Mesocricetus_auratus
WBGene00010260	ddx-17	79	60.497	ENSMICG00000011601	DDX17	88	60.109	Microcebus_murinus
WBGene00010260	ddx-17	79	58.202	ENSMOCG00000010769	Ddx17	62	57.298	Microtus_ochrogaster
WBGene00010260	ddx-17	68	58.594	ENSMMOG00000002806	-	89	59.452	Mola_mola
WBGene00010260	ddx-17	70	57.606	ENSMMOG00000007416	si:dkey-156n14.5	86	58.808	Mola_mola
WBGene00010260	ddx-17	79	60.497	ENSMODG00000009681	DDX17	72	60.045	Monodelphis_domestica
WBGene00010260	ddx-17	89	56.000	ENSMALG00000002485	si:dkey-156n14.5	70	59.020	Monopterus_albus
WBGene00010260	ddx-17	79	60.497	MGP_CAROLIEiJ_G0020017	Ddx17	69	60.045	Mus_caroli
WBGene00010260	ddx-17	79	60.497	ENSMUSG00000055065	Ddx17	90	60.109	Mus_musculus
WBGene00010260	ddx-17	79	60.497	MGP_PahariEiJ_G0020019	Ddx17	69	60.045	Mus_pahari
WBGene00010260	ddx-17	79	60.497	MGP_SPRETEiJ_G0020915	Ddx17	69	60.045	Mus_spretus
WBGene00010260	ddx-17	79	60.497	ENSMPUG00000013125	DDX17	69	60.045	Mustela_putorius_furo
WBGene00010260	ddx-17	81	59.519	ENSMLUG00000013151	DDX17	70	59.911	Myotis_lucifugus
WBGene00010260	ddx-17	79	60.497	ENSNGAG00000004001	Ddx17	69	60.045	Nannospalax_galili
WBGene00010260	ddx-17	71	57.500	ENSNBRG00000020059	-	90	58.225	Neolamprologus_brichardi
WBGene00010260	ddx-17	68	58.594	ENSNBRG00000002592	DDX17	84	59.726	Neolamprologus_brichardi
WBGene00010260	ddx-17	81	59.519	ENSNLEG00000015117	DDX17	88	60.109	Nomascus_leucogenys
WBGene00010260	ddx-17	68	58.808	ENSMEUG00000009627	DDX17	58	60.109	Notamacropus_eugenii
WBGene00010260	ddx-17	79	60.497	ENSOPRG00000014734	DDX17	61	60.045	Ochotona_princeps
WBGene00010260	ddx-17	79	56.982	ENSODEG00000013118	DDX17	62	56.570	Octodon_degus
WBGene00010260	ddx-17	81	59.251	ENSONIG00000018880	si:dkey-156n14.5	88	59.726	Oreochromis_niloticus
WBGene00010260	ddx-17	79	60.497	ENSOCUG00000004982	DDX17	69	60.045	Oryctolagus_cuniculus
WBGene00010260	ddx-17	81	58.242	ENSORLG00000013685	si:dkey-156n14.5	70	57.576	Oryzias_latipes
WBGene00010260	ddx-17	81	58.462	ENSORLG00020021743	si:dkey-156n14.5	70	57.792	Oryzias_latipes_hni
WBGene00010260	ddx-17	80	59.071	ENSORLG00015022548	si:dkey-156n14.5	70	58.980	Oryzias_latipes_hsok
WBGene00010260	ddx-17	86	56.757	ENSOMEG00000009515	si:dkey-156n14.5	73	57.576	Oryzias_melastigma
WBGene00010260	ddx-17	79	60.497	ENSOGAG00000001539	DDX17	69	60.045	Otolemur_garnettii
WBGene00010260	ddx-17	81	59.519	ENSOARG00000015489	DDX17	71	60.045	Ovis_aries
WBGene00010260	ddx-17	81	59.519	ENSPPAG00000042301	DDX17	88	60.109	Pan_paniscus
WBGene00010260	ddx-17	79	60.497	ENSPPRG00000008444	DDX17	60	60.045	Panthera_pardus
WBGene00010260	ddx-17	82	58.963	ENSPTIG00000008733	DDX17	88	60.109	Panthera_tigris_altaica
WBGene00010260	ddx-17	81	59.519	ENSPTRG00000014369	DDX17	88	60.109	Pan_troglodytes
WBGene00010260	ddx-17	81	59.519	ENSPANG00000015143	DDX17	88	60.109	Papio_anubis
WBGene00010260	ddx-17	80	58.537	ENSPKIG00000007831	DDX17	68	57.451	Paramormyrops_kingsleyae
WBGene00010260	ddx-17	79	60.633	ENSPKIG00000002575	si:dkey-156n14.5	66	60.222	Paramormyrops_kingsleyae
WBGene00010260	ddx-17	79	60.497	ENSPEMG00000021115	Ddx17	69	60.045	Peromyscus_maniculatus_bairdii
WBGene00010260	ddx-17	79	60.497	ENSPCIG00000001652	DDX17	69	60.045	Phascolarctos_cinereus
WBGene00010260	ddx-17	79	59.050	ENSPREG00000000506	si:dkey-156n14.5	69	58.758	Poecilia_reticulata
WBGene00010260	ddx-17	79	60.497	ENSPPYG00000011821	DDX17	69	60.045	Pongo_abelii
WBGene00010260	ddx-17	79	60.271	ENSPCAG00000011672	DDX17	62	59.821	Procavia_capensis
WBGene00010260	ddx-17	83	59.101	ENSPCOG00000014360	DDX17	88	60.109	Propithecus_coquereli
WBGene00010260	ddx-17	79	60.497	ENSPVAG00000010133	DDX17	61	60.045	Pteropus_vampyrus
WBGene00010260	ddx-17	81	59.603	ENSPNYG00000005694	si:dkey-156n14.5	70	58.963	Pundamilia_nyererei
WBGene00010260	ddx-17	81	59.121	ENSPNYG00000019669	-	72	59.911	Pundamilia_nyererei
WBGene00010260	ddx-17	81	59.780	ENSPNAG00000029948	si:dkey-156n14.5	89	60.274	Pygocentrus_nattereri
WBGene00010260	ddx-17	79	60.497	ENSRNOG00000051170	Ddx17	69	60.045	Rattus_norvegicus
WBGene00010260	ddx-17	79	60.497	ENSRBIG00000031437	DDX17	84	59.710	Rhinopithecus_bieti
WBGene00010260	ddx-17	79	60.497	ENSRROG00000045378	DDX17	88	60.109	Rhinopithecus_roxellana
WBGene00010260	ddx-17	87	50.806	YNL112W	-	85	53.463	Saccharomyces_cerevisiae
WBGene00010260	ddx-17	81	54.505	ENSSBOG00000024547	DDX17	62	54.077	Saimiri_boliviensis_boliviensis
WBGene00010260	ddx-17	81	59.389	ENSSHAG00000004578	DDX17	71	59.911	Sarcophilus_harrisii
WBGene00010260	ddx-17	80	58.980	ENSSFOG00015012308	ddx17	68	58.315	Scleropages_formosus
WBGene00010260	ddx-17	81	58.901	ENSSMAG00000005509	DDX17	71	57.725	Scophthalmus_maximus
WBGene00010260	ddx-17	80	59.778	ENSSMAG00000007794	si:dkey-156n14.5	70	58.315	Scophthalmus_maximus
WBGene00010260	ddx-17	81	58.720	ENSSPAG00000017130	si:dkey-156n14.5	71	58.099	Stegastes_partitus
WBGene00010260	ddx-17	68	58.333	ENSSPAG00000019808	-	90	59.178	Stegastes_partitus
WBGene00010260	ddx-17	79	60.497	ENSSSCG00000000104	DDX17	88	60.109	Sus_scrofa
WBGene00010260	ddx-17	79	60.045	ENSTGUG00000010391	DDX17	69	59.598	Taeniopygia_guttata
WBGene00010260	ddx-17	81	58.720	ENSTRUG00000021931	si:dkey-156n14.5	71	57.883	Takifugu_rubripes
WBGene00010260	ddx-17	81	57.987	ENSTTRG00000005623	DDX17	71	58.482	Tursiops_truncatus
WBGene00010260	ddx-17	87	57.230	ENSUAMG00000007290	DDX17	90	60.449	Ursus_americanus
WBGene00010260	ddx-17	72	62.408	ENSVPAG00000001476	DDX17	58	61.124	Vicugna_pacos
WBGene00010260	ddx-17	66	59.946	ENSVVUG00000022762	DDX17	88	60.109	Vulpes_vulpes
WBGene00010260	ddx-17	82	58.824	ENSXETG00000006900	ddx17	74	58.315	Xenopus_tropicalis
WBGene00010260	ddx-17	79	59.009	ENSXMAG00000005078	si:dkey-156n14.5	70	58.099	Xiphophorus_maculatus