EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00010304 (Gene tree)
Gene ID: -
Gene Symbol: clpf-1
Alias: -
Full Name: CLeavage/Polyadenylation Factor Ia subunit
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 2902 bases
Position: chrIII:3397743-3400644
Accession: Q2EEP3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F59A2	Clp1	PF06807.14	8.8e-27	1	1
F59A2	Clp1	PF06807.14	9.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F59A2.4a	-	1364	NM_001047393	F59A2.4a	428 (aa)	NP_001040858	P52874
F59A2.4b	-	582	-	F59A2.4b	85 (aa)	NP_001040859	Q2EEP3

Gene Model

Click here to download WBGene00010304's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00010304's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00010304	clpf-1	97	47.962	ENSG00000172409	CLP1	96	47.962	Homo_sapiens
WBGene00010304	clpf-1	96	47.031	ENSAPOG00000008242	clp1	94	47.031	Acanthochromis_polyacanthus
WBGene00010304	clpf-1	97	47.962	ENSAMEG00000014551	CLP1	95	47.962	Ailuropoda_melanoleuca
WBGene00010304	clpf-1	96	47.268	ENSACIG00000006310	clp1	93	47.268	Amphilophus_citrinellus
WBGene00010304	clpf-1	99	46.279	ENSAOCG00000010681	clp1	99	46.279	Amphiprion_ocellaris
WBGene00010304	clpf-1	96	47.031	ENSAPEG00000012165	clp1	97	47.031	Amphiprion_percula
WBGene00010304	clpf-1	97	47.991	ENSATEG00000012374	clp1	95	47.991	Anabas_testudineus
WBGene00010304	clpf-1	98	48.449	ENSACAG00000007139	CLP1	97	48.449	Anolis_carolinensis
WBGene00010304	clpf-1	97	47.962	ENSANAG00000034935	CLP1	96	47.962	Aotus_nancymaae
WBGene00010304	clpf-1	97	47.281	ENSACLG00000013573	clp1	95	47.281	Astatotilapia_calliptera
WBGene00010304	clpf-1	96	46.556	ENSAMXG00000014194	clp1	96	46.556	Astyanax_mexicanus
WBGene00010304	clpf-1	97	47.962	ENSBTAG00000006493	CLP1	96	47.962	Bos_taurus
WBGene00010304	clpf-1	97	47.962	ENSCJAG00000008748	CLP1	96	47.962	Callithrix_jacchus
WBGene00010304	clpf-1	97	47.962	ENSCAFG00000007815	CLP1	96	47.962	Canis_familiaris
WBGene00010304	clpf-1	97	47.962	ENSCAFG00020000903	CLP1	96	47.962	Canis_lupus_dingo
WBGene00010304	clpf-1	97	47.962	ENSCHIG00000023497	CLP1	96	47.962	Capra_hircus
WBGene00010304	clpf-1	97	47.962	ENSTSYG00000006824	CLP1	95	47.962	Carlito_syrichta
WBGene00010304	clpf-1	99	47.552	ENSCAPG00000009703	CLP1	99	47.552	Cavia_aperea
WBGene00010304	clpf-1	97	47.962	ENSCPOG00000012554	CLP1	98	47.962	Cavia_porcellus
WBGene00010304	clpf-1	97	48.201	ENSCCAG00000031957	CLP1	96	48.201	Cebus_capucinus
WBGene00010304	clpf-1	97	47.962	ENSCATG00000044628	CLP1	96	47.962	Cercocebus_atys
WBGene00010304	clpf-1	97	47.962	ENSCLAG00000004094	CLP1	96	47.962	Chinchilla_lanigera
WBGene00010304	clpf-1	97	47.962	ENSCSAG00000005994	CLP1	96	47.962	Chlorocebus_sabaeus
WBGene00010304	clpf-1	98	47.393	ENSCPBG00000016843	CLP1	98	47.393	Chrysemys_picta_bellii
WBGene00010304	clpf-1	97	46.172	ENSCING00000003779	-	96	46.172	Ciona_intestinalis
WBGene00010304	clpf-1	98	47.733	ENSCSAVG00000003437	-	97	47.733	Ciona_savignyi
WBGene00010304	clpf-1	97	47.962	ENSCANG00000034335	CLP1	96	47.962	Colobus_angolensis_palliatus
WBGene00010304	clpf-1	99	47.209	ENSCGRG00001002227	CLP1	99	47.209	Cricetulus_griseus_chok1gshd
WBGene00010304	clpf-1	99	47.209	ENSCGRG00000004328	CLP1	99	47.209	Cricetulus_griseus_crigri
WBGene00010304	clpf-1	97	47.754	ENSCSEG00000008614	clp1	95	47.754	Cynoglossus_semilaevis
WBGene00010304	clpf-1	97	47.281	ENSCVAG00000020101	clp1	95	47.281	Cyprinodon_variegatus
WBGene00010304	clpf-1	97	47.981	ENSDARG00000063663	clp1	94	47.981	Danio_rerio
WBGene00010304	clpf-1	97	47.962	ENSDNOG00000042415	CLP1	87	47.962	Dasypus_novemcinctus
WBGene00010304	clpf-1	97	47.962	ENSDORG00000014685	Clp1	96	47.962	Dipodomys_ordii
WBGene00010304	clpf-1	99	42.056	FBgn0033842	cbc	99	42.056	Drosophila_melanogaster
WBGene00010304	clpf-1	97	47.962	ENSETEG00000003009	CLP1	96	47.962	Echinops_telfairi
WBGene00010304	clpf-1	98	43.230	ENSEBUG00000011648	clp1	98	43.230	Eptatretus_burgeri
WBGene00010304	clpf-1	97	47.962	ENSEASG00005002093	CLP1	96	47.962	Equus_asinus_asinus
WBGene00010304	clpf-1	97	47.962	ENSECAG00000011597	CLP1	96	47.962	Equus_caballus
WBGene00010304	clpf-1	99	47.209	ENSEEUG00000012771	CLP1	99	47.209	Erinaceus_europaeus
WBGene00010304	clpf-1	97	47.281	ENSELUG00000024048	clp1	94	47.281	Esox_lucius
WBGene00010304	clpf-1	97	47.962	ENSFCAG00000006633	CLP1	96	47.962	Felis_catus
WBGene00010304	clpf-1	98	48.104	ENSFALG00000011145	CLP1	98	48.104	Ficedula_albicollis
WBGene00010304	clpf-1	97	47.962	ENSFDAG00000000234	CLP1	96	47.962	Fukomys_damarensis
WBGene00010304	clpf-1	97	47.045	ENSFHEG00000014760	CLP1	95	47.045	Fundulus_heteroclitus
WBGene00010304	clpf-1	97	48.095	ENSGMOG00000019340	clp1	95	48.095	Gadus_morhua
WBGene00010304	clpf-1	98	47.630	ENSGALG00000007370	CLP1	98	47.630	Gallus_gallus
WBGene00010304	clpf-1	97	47.281	ENSGAFG00000003020	clp1	96	47.281	Gambusia_affinis
WBGene00010304	clpf-1	97	47.281	ENSGACG00000017832	clp1	95	47.281	Gasterosteus_aculeatus
WBGene00010304	clpf-1	98	47.393	ENSGAGG00000013279	CLP1	98	47.393	Gopherus_agassizii
WBGene00010304	clpf-1	97	47.962	ENSGGOG00000023006	CLP1	96	47.962	Gorilla_gorilla
WBGene00010304	clpf-1	97	47.045	ENSHBUG00000010436	clp1	95	47.045	Haplochromis_burtoni
WBGene00010304	clpf-1	97	47.962	ENSHGLG00000009914	CLP1	96	47.962	Heterocephalus_glaber_female
WBGene00010304	clpf-1	97	47.962	ENSHGLG00100006105	CLP1	96	47.962	Heterocephalus_glaber_male
WBGene00010304	clpf-1	97	48.000	ENSHCOG00000010072	clp1	95	48.000	Hippocampus_comes
WBGene00010304	clpf-1	97	47.991	ENSIPUG00000016238	clp1	93	47.991	Ictalurus_punctatus
WBGene00010304	clpf-1	97	47.962	ENSSTOG00000029257	CLP1	96	47.962	Ictidomys_tridecemlineatus
WBGene00010304	clpf-1	97	47.962	ENSJJAG00000023691	Clp1	96	47.962	Jaculus_jaculus
WBGene00010304	clpf-1	97	47.991	ENSKMAG00000011990	clp1	95	47.991	Kryptolebias_marmoratus
WBGene00010304	clpf-1	97	47.518	ENSLBEG00000010201	clp1	95	47.518	Labrus_bergylta
WBGene00010304	clpf-1	99	47.754	ENSLACG00000003160	CLP1	98	47.754	Latimeria_chalumnae
WBGene00010304	clpf-1	94	32.609	ENSLOCG00000008074	clp1	99	45.312	Lepisosteus_oculatus
WBGene00010304	clpf-1	97	47.962	ENSLAFG00000014907	CLP1	96	47.962	Loxodonta_africana
WBGene00010304	clpf-1	97	47.962	ENSMFAG00000046074	CLP1	96	47.962	Macaca_fascicularis
WBGene00010304	clpf-1	97	47.962	ENSMMUG00000038007	CLP1	95	47.962	Macaca_mulatta
WBGene00010304	clpf-1	97	47.962	ENSMNEG00000000259	CLP1	96	47.962	Macaca_nemestrina
WBGene00010304	clpf-1	97	47.962	ENSMLEG00000043556	CLP1	96	47.962	Mandrillus_leucophaeus
WBGene00010304	clpf-1	97	47.281	ENSMAMG00000002149	clp1	95	47.281	Mastacembelus_armatus
WBGene00010304	clpf-1	97	47.281	ENSMZEG00005002850	clp1	95	47.281	Maylandia_zebra
WBGene00010304	clpf-1	98	47.630	ENSMGAG00000009643	CLP1	98	47.630	Meleagris_gallopavo
WBGene00010304	clpf-1	99	46.977	ENSMAUG00000016261	Clp1	99	46.977	Mesocricetus_auratus
WBGene00010304	clpf-1	97	47.962	ENSMICG00000004895	CLP1	96	47.962	Microcebus_murinus
WBGene00010304	clpf-1	99	47.442	ENSMOCG00000005498	Clp1	99	47.442	Microtus_ochrogaster
WBGene00010304	clpf-1	97	47.281	ENSMMOG00000003229	clp1	95	47.281	Mola_mola
WBGene00010304	clpf-1	99	46.744	ENSMODG00000020107	-	99	47.209	Monodelphis_domestica
WBGene00010304	clpf-1	99	46.744	ENSMODG00000024148	-	99	47.209	Monodelphis_domestica
WBGene00010304	clpf-1	96	47.506	ENSMALG00000014239	clp1	94	47.506	Monopterus_albus
WBGene00010304	clpf-1	99	47.209	MGP_CAROLIEiJ_G0023726	Clp1	99	47.209	Mus_caroli
WBGene00010304	clpf-1	99	47.209	ENSMUSG00000027079	Clp1	99	47.209	Mus_musculus
WBGene00010304	clpf-1	99	47.209	MGP_PahariEiJ_G0025177	Clp1	99	47.209	Mus_pahari
WBGene00010304	clpf-1	99	47.209	MGP_SPRETEiJ_G0024646	Clp1	99	47.209	Mus_spretus
WBGene00010304	clpf-1	97	47.962	ENSMPUG00000000268	CLP1	96	47.962	Mustela_putorius_furo
WBGene00010304	clpf-1	97	47.482	ENSMLUG00000007904	CLP1	96	47.482	Myotis_lucifugus
WBGene00010304	clpf-1	97	48.201	ENSNGAG00000006165	Clp1	96	48.201	Nannospalax_galili
WBGene00010304	clpf-1	97	47.281	ENSNBRG00000005225	clp1	95	47.281	Neolamprologus_brichardi
WBGene00010304	clpf-1	94	37.037	ENSNLEG00000012809	-	95	49.485	Nomascus_leucogenys
WBGene00010304	clpf-1	99	46.744	ENSMEUG00000010949	CLP1	99	47.209	Notamacropus_eugenii
WBGene00010304	clpf-1	94	37.037	ENSOPRG00000007329	CLP1	99	47.138	Ochotona_princeps
WBGene00010304	clpf-1	97	47.962	ENSODEG00000011410	CLP1	96	47.962	Octodon_degus
WBGene00010304	clpf-1	97	47.281	ENSONIG00000005089	clp1	95	47.281	Oreochromis_niloticus
WBGene00010304	clpf-1	97	47.962	ENSOCUG00000007045	CLP1	96	47.962	Oryctolagus_cuniculus
WBGene00010304	clpf-1	98	46.963	ENSORLG00000003647	clp1	96	46.963	Oryzias_latipes
WBGene00010304	clpf-1	98	46.963	ENSORLG00020016676	clp1	96	46.963	Oryzias_latipes_hni
WBGene00010304	clpf-1	98	46.963	ENSORLG00015019484	clp1	96	46.963	Oryzias_latipes_hsok
WBGene00010304	clpf-1	97	47.754	ENSOMEG00000021303	clp1	95	47.754	Oryzias_melastigma
WBGene00010304	clpf-1	97	47.962	ENSOGAG00000004508	CLP1	96	47.962	Otolemur_garnettii
WBGene00010304	clpf-1	97	47.242	ENSOARG00000010145	CLP1	95	47.242	Ovis_aries
WBGene00010304	clpf-1	97	47.962	ENSPPAG00000041519	CLP1	96	47.962	Pan_paniscus
WBGene00010304	clpf-1	97	47.962	ENSPPRG00000006135	CLP1	96	47.962	Panthera_pardus
WBGene00010304	clpf-1	97	47.962	ENSPTIG00000015866	CLP1	96	47.962	Panthera_tigris_altaica
WBGene00010304	clpf-1	97	47.962	ENSPTRG00000047318	CLP1	96	47.962	Pan_troglodytes
WBGene00010304	clpf-1	97	47.962	ENSPANG00000017078	CLP1	94	47.962	Papio_anubis
WBGene00010304	clpf-1	97	48.798	ENSPKIG00000007697	clp1	94	48.798	Paramormyrops_kingsleyae
WBGene00010304	clpf-1	94	47.132	ENSPSIG00000005468	CLP1	98	47.132	Pelodiscus_sinensis
WBGene00010304	clpf-1	97	47.754	ENSPMGG00000012171	clp1	95	47.754	Periophthalmus_magnuspinnatus
WBGene00010304	clpf-1	99	47.442	ENSPEMG00000011213	-	99	47.442	Peromyscus_maniculatus_bairdii
WBGene00010304	clpf-1	99	44.626	ENSPMAG00000006707	clp1	99	44.626	Petromyzon_marinus
WBGene00010304	clpf-1	99	46.744	ENSPCIG00000011899	CLP1	99	47.209	Phascolarctos_cinereus
WBGene00010304	clpf-1	97	47.059	ENSPFOG00000008169	clp1	95	47.059	Poecilia_formosa
WBGene00010304	clpf-1	97	47.059	ENSPLAG00000022388	clp1	96	47.059	Poecilia_latipinna
WBGene00010304	clpf-1	97	47.059	ENSPMEG00000021088	clp1	96	47.059	Poecilia_mexicana
WBGene00010304	clpf-1	97	47.518	ENSPREG00000017802	clp1	95	47.518	Poecilia_reticulata
WBGene00010304	clpf-1	94	37.037	ENSPPYG00000003266	-	97	46.119	Pongo_abelii
WBGene00010304	clpf-1	97	47.962	ENSPCOG00000000360	CLP1	95	47.962	Propithecus_coquereli
WBGene00010304	clpf-1	97	47.962	ENSPVAG00000016270	CLP1	96	47.962	Pteropus_vampyrus
WBGene00010304	clpf-1	97	47.045	ENSPNYG00000017274	clp1	94	47.045	Pundamilia_nyererei
WBGene00010304	clpf-1	97	47.518	ENSPNAG00000026460	clp1	94	47.518	Pygocentrus_nattereri
WBGene00010304	clpf-1	99	47.209	ENSRNOG00000007416	Clp1	99	47.209	Rattus_norvegicus
WBGene00010304	clpf-1	97	47.962	ENSRBIG00000018191	CLP1	96	47.962	Rhinopithecus_bieti
WBGene00010304	clpf-1	97	47.962	ENSRROG00000039265	CLP1	96	47.962	Rhinopithecus_roxellana
WBGene00010304	clpf-1	89	39.426	ENSSBOG00000010558	-	90	39.426	Saimiri_boliviensis_boliviensis
WBGene00010304	clpf-1	97	47.962	ENSSBOG00000032517	-	96	47.962	Saimiri_boliviensis_boliviensis
WBGene00010304	clpf-1	99	46.744	ENSSHAG00000015695	CLP1	99	47.209	Sarcophilus_harrisii
WBGene00010304	clpf-1	97	46.495	ENSSFOG00015000628	clp1	96	46.495	Scleropages_formosus
WBGene00010304	clpf-1	97	47.045	ENSSMAG00000019423	clp1	93	47.045	Scophthalmus_maximus
WBGene00010304	clpf-1	97	47.754	ENSSDUG00000014495	clp1	95	47.754	Seriola_dumerili
WBGene00010304	clpf-1	97	47.518	ENSSLDG00000000937	clp1	95	47.518	Seriola_lalandi_dorsalis
WBGene00010304	clpf-1	94	37.037	ENSSARG00000002459	CLP1	98	46.119	Sorex_araneus
WBGene00010304	clpf-1	98	47.733	ENSSPUG00000016811	CLP1	97	47.733	Sphenodon_punctatus
WBGene00010304	clpf-1	96	47.268	ENSSPAG00000016052	clp1	94	47.268	Stegastes_partitus
WBGene00010304	clpf-1	97	47.962	ENSSSCG00000031442	CLP1	96	47.962	Sus_scrofa
WBGene00010304	clpf-1	98	47.867	ENSTGUG00000007002	CLP1	98	47.867	Taeniopygia_guttata
WBGene00010304	clpf-1	96	47.242	ENSTRUG00000012602	clp1	94	47.242	Takifugu_rubripes
WBGene00010304	clpf-1	96	47.002	ENSTNIG00000013125	clp1	94	47.002	Tetraodon_nigroviridis
WBGene00010304	clpf-1	97	47.482	ENSTBEG00000009975	CLP1	96	47.482	Tupaia_belangeri
WBGene00010304	clpf-1	97	47.962	ENSTTRG00000002096	CLP1	96	47.962	Tursiops_truncatus
WBGene00010304	clpf-1	97	47.962	ENSUAMG00000011388	CLP1	96	47.962	Ursus_americanus
WBGene00010304	clpf-1	97	47.962	ENSUMAG00000018317	CLP1	96	47.962	Ursus_maritimus
WBGene00010304	clpf-1	97	47.962	ENSVVUG00000017138	CLP1	93	47.962	Vulpes_vulpes
WBGene00010304	clpf-1	97	46.429	ENSXETG00000007088	clp1	94	46.778	Xenopus_tropicalis
WBGene00010304	clpf-1	97	47.281	ENSXCOG00000002287	clp1	95	47.281	Xiphophorus_couchianus
WBGene00010304	clpf-1	97	47.281	ENSXMAG00000009783	clp1	95	47.281	Xiphophorus_maculatus