EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00010478 (Gene tree)
Gene ID: -
Gene Symbol: K01G5.5
Alias: -
Full Name: Putative H/ACA ribonucleoprotein complex subunit 4
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: confidence
Strand: Plus strand
Length: 1652 bases
Position: chrIII:10748429-10750080
Accession: O17919
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
K01G5	TruB_N	PF01509.18	1.1e-21	1	1
K01G5	PUA	PF01472.20	2.5e-19	1	1
K01G5	DKCLD	PF08068.12	1.5e-30	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
K01G5.5	-	1503	NM_066969	K01G5.5	445 (aa)	NP_499370	O17919

Gene Model

Click here to download WBGene00010478's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00010478's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00010478	K01G5.5	98	65.068	ENSG00000130826	DKC1	98	68.966	Homo_sapiens
WBGene00010478	K01G5.5	97	62.356	ENSAPOG00000007799	dkc1	89	60.573	Acanthochromis_polyacanthus
WBGene00010478	K01G5.5	98	64.531	ENSAMEG00000002776	DKC1	81	67.070	Ailuropoda_melanoleuca
WBGene00010478	K01G5.5	94	64.200	ENSACIG00000022614	dkc1	93	63.158	Amphilophus_citrinellus
WBGene00010478	K01G5.5	97	61.894	ENSAOCG00000013159	dkc1	82	64.268	Amphiprion_ocellaris
WBGene00010478	K01G5.5	97	61.949	ENSAPEG00000002284	dkc1	90	60.998	Amphiprion_percula
WBGene00010478	K01G5.5	95	60.134	ENSATEG00000013682	dkc1	90	58.568	Anabas_testudineus
WBGene00010478	K01G5.5	95	63.915	ENSACAG00000015600	DKC1	72	64.251	Anolis_carolinensis
WBGene00010478	K01G5.5	98	63.946	ENSANAG00000022732	DKC1	80	67.070	Aotus_nancymaae
WBGene00010478	K01G5.5	88	66.412	ENSACLG00000015605	dkc1	82	65.509	Astatotilapia_calliptera
WBGene00010478	K01G5.5	95	63.443	ENSAMXG00000017108	dkc1	81	65.111	Astyanax_mexicanus
WBGene00010478	K01G5.5	97	63.242	ENSBTAG00000013045	DKC1	82	66.586	Bos_taurus
WBGene00010478	K01G5.5	98	64.399	ENSCJAG00000004210	DKC1	80	67.312	Callithrix_jacchus
WBGene00010478	K01G5.5	97	57.241	ENSCAFG00000009311	-	80	59.606	Canis_familiaris
WBGene00010478	K01G5.5	98	64.108	ENSCAFG00000019620	-	80	66.828	Canis_familiaris
WBGene00010478	K01G5.5	98	64.108	ENSCAFG00020008918	-	80	66.828	Canis_lupus_dingo
WBGene00010478	K01G5.5	98	56.591	ENSCAFG00020009379	-	77	58.867	Canis_lupus_dingo
WBGene00010478	K01G5.5	97	63.470	ENSCHIG00000017392	DKC1	82	66.586	Capra_hircus
WBGene00010478	K01G5.5	98	64.045	ENSTSYG00000007681	DKC1	79	66.828	Carlito_syrichta
WBGene00010478	K01G5.5	91	64.851	ENSCAPG00000003342	DKC1	84	69.106	Cavia_aperea
WBGene00010478	K01G5.5	98	63.908	ENSCPOG00000008825	DKC1	79	66.995	Cavia_porcellus
WBGene00010478	K01G5.5	98	57.991	ENSCCAG00000027418	DKC1	79	59.806	Cebus_capucinus
WBGene00010478	K01G5.5	98	64.172	ENSCATG00000033602	DKC1	80	67.070	Cercocebus_atys
WBGene00010478	K01G5.5	97	64.679	ENSCLAG00000000720	DKC1	81	66.990	Chinchilla_lanigera
WBGene00010478	K01G5.5	98	64.840	ENSCSAG00000006706	DKC1	80	67.070	Chlorocebus_sabaeus
WBGene00010478	K01G5.5	90	66.165	ENSCPBG00000005858	DKC1	88	66.019	Chrysemys_picta_bellii
WBGene00010478	K01G5.5	86	65.974	ENSCING00000004599	-	77	64.899	Ciona_intestinalis
WBGene00010478	K01G5.5	87	66.150	ENSCSAVG00000010047	-	93	63.133	Ciona_savignyi
WBGene00010478	K01G5.5	98	64.840	ENSCANG00000027987	DKC1	80	67.070	Colobus_angolensis_palliatus
WBGene00010478	K01G5.5	98	63.218	ENSCGRG00001014574	-	79	66.502	Cricetulus_griseus_chok1gshd
WBGene00010478	K01G5.5	86	53.018	ENSCGRG00001016789	-	81	53.018	Cricetulus_griseus_chok1gshd
WBGene00010478	K01G5.5	98	63.218	ENSCGRG00000016075	-	79	66.502	Cricetulus_griseus_crigri
WBGene00010478	K01G5.5	86	53.018	ENSCGRG00000014809	-	80	53.018	Cricetulus_griseus_crigri
WBGene00010478	K01G5.5	90	65.500	ENSCSEG00000012633	dkc1	85	65.500	Cynoglossus_semilaevis
WBGene00010478	K01G5.5	96	61.072	ENSCVAG00000010155	dkc1	79	64.286	Cyprinodon_variegatus
WBGene00010478	K01G5.5	91	65.261	ENSDARG00000016484	dkc1	81	64.548	Danio_rerio
WBGene00010478	K01G5.5	98	63.908	ENSDNOG00000004218	DKC1	79	66.995	Dasypus_novemcinctus
WBGene00010478	K01G5.5	63	58.065	ENSDORG00000013566	-	95	57.692	Dipodomys_ordii
WBGene00010478	K01G5.5	97	64.037	FBgn0259937	Nop60B	93	66.667	Drosophila_melanogaster
WBGene00010478	K01G5.5	89	67.172	ENSETEG00000016095	DKC1	82	66.749	Echinops_telfairi
WBGene00010478	K01G5.5	72	66.250	ENSEBUG00000015962	dkc1	99	69.283	Eptatretus_burgeri
WBGene00010478	K01G5.5	98	63.229	ENSEASG00005007484	DKC1	78	66.749	Equus_asinus_asinus
WBGene00010478	K01G5.5	98	63.229	ENSECAG00000023524	DKC1	78	66.749	Equus_caballus
WBGene00010478	K01G5.5	92	65.037	ENSEEUG00000003323	DKC1	89	68.170	Erinaceus_europaeus
WBGene00010478	K01G5.5	97	61.021	ENSELUG00000014538	dkc1	81	64.268	Esox_lucius
WBGene00010478	K01G5.5	97	64.073	ENSFCAG00000006577	DKC1	81	66.828	Felis_catus
WBGene00010478	K01G5.5	97	62.187	ENSFALG00000011496	DKC1	78	66.015	Ficedula_albicollis
WBGene00010478	K01G5.5	97	64.138	ENSFDAG00000002516	DKC1	81	67.246	Fukomys_damarensis
WBGene00010478	K01G5.5	96	61.502	ENSFHEG00000004627	dkc1	81	64.865	Fundulus_heteroclitus
WBGene00010478	K01G5.5	87	62.468	ENSGMOG00000017277	dkc1	99	62.468	Gadus_morhua
WBGene00010478	K01G5.5	97	64.120	ENSGALG00000005054	DKC1	80	66.586	Gallus_gallus
WBGene00010478	K01G5.5	98	61.290	ENSGAFG00000011486	dkc1	70	64.865	Gambusia_affinis
WBGene00010478	K01G5.5	88	64.885	ENSGACG00000004373	dkc1	96	66.565	Gasterosteus_aculeatus
WBGene00010478	K01G5.5	96	62.754	ENSGAGG00000011330	DKC1	78	66.749	Gopherus_agassizii
WBGene00010478	K01G5.5	98	65.068	ENSGGOG00000001045	DKC1	80	67.312	Gorilla_gorilla
WBGene00010478	K01G5.5	94	62.850	ENSHBUG00000012436	dkc1	81	65.517	Haplochromis_burtoni
WBGene00010478	K01G5.5	90	66.917	ENSHGLG00000000649	DKC1	78	66.749	Heterocephalus_glaber_female
WBGene00010478	K01G5.5	90	66.917	ENSHGLG00100001153	DKC1	79	66.749	Heterocephalus_glaber_male
WBGene00010478	K01G5.5	93	62.207	ENSHCOG00000021099	dkc1	81	64.216	Hippocampus_comes
WBGene00010478	K01G5.5	97	62.963	ENSIPUG00000010309	dkc1	79	65.207	Ictalurus_punctatus
WBGene00010478	K01G5.5	98	63.781	ENSSTOG00000001074	-	83	66.995	Ictidomys_tridecemlineatus
WBGene00010478	K01G5.5	98	55.581	ENSSTOG00000011904	-	74	57.882	Ictidomys_tridecemlineatus
WBGene00010478	K01G5.5	98	58.716	ENSSTOG00000020149	-	79	62.438	Ictidomys_tridecemlineatus
WBGene00010478	K01G5.5	62	57.971	ENSJJAG00000010086	-	95	57.692	Jaculus_jaculus
WBGene00010478	K01G5.5	97	62.500	ENSKMAG00000008010	dkc1	82	65.025	Kryptolebias_marmoratus
WBGene00010478	K01G5.5	97	61.574	ENSLBEG00000019122	dkc1	84	63.747	Labrus_bergylta
WBGene00010478	K01G5.5	92	65.366	ENSLACG00000014025	DKC1	92	66.253	Latimeria_chalumnae
WBGene00010478	K01G5.5	97	63.279	ENSLOCG00000013713	dkc1	82	66.327	Lepisosteus_oculatus
WBGene00010478	K01G5.5	98	64.155	ENSLAFG00000000221	DKC1	80	66.828	Loxodonta_africana
WBGene00010478	K01G5.5	98	64.773	ENSMFAG00000032398	DKC1	74	63.409	Macaca_fascicularis
WBGene00010478	K01G5.5	98	64.840	ENSMMUG00000005768	DKC1	80	67.070	Macaca_mulatta
WBGene00010478	K01G5.5	98	64.840	ENSMNEG00000034503	DKC1	80	67.070	Macaca_nemestrina
WBGene00010478	K01G5.5	98	64.840	ENSMLEG00000034422	DKC1	80	67.070	Mandrillus_leucophaeus
WBGene00010478	K01G5.5	90	65.500	ENSMAMG00000005427	dkc1	89	65.500	Mastacembelus_armatus
WBGene00010478	K01G5.5	94	62.617	ENSMZEG00005014503	dkc1	81	65.271	Maylandia_zebra
WBGene00010478	K01G5.5	87	67.183	ENSMGAG00000009238	DKC1	80	68.378	Meleagris_gallopavo
WBGene00010478	K01G5.5	63	58.065	ENSMAUG00000016454	-	95	57.692	Mesocricetus_auratus
WBGene00010478	K01G5.5	90	58.231	ENSMICG00000002818	-	98	59.945	Microcebus_murinus
WBGene00010478	K01G5.5	98	63.532	ENSMICG00000038751	-	82	66.344	Microcebus_murinus
WBGene00010478	K01G5.5	63	56.272	ENSMOCG00000001169	-	94	55.944	Microtus_ochrogaster
WBGene00010478	K01G5.5	89	64.987	ENSMMOG00000020348	dkc1	88	64.764	Mola_mola
WBGene00010478	K01G5.5	96	62.005	ENSMODG00000009243	DKC1	71	65.356	Monodelphis_domestica
WBGene00010478	K01G5.5	93	63.658	ENSMALG00000009454	dkc1	81	65.281	Monopterus_albus
WBGene00010478	K01G5.5	97	55.530	MGP_CAROLIEiJ_G0033191	Dkc1	92	68.148	Mus_caroli
WBGene00010478	K01G5.5	98	63.326	ENSMUSG00000031403	Dkc1	95	57.692	Mus_musculus
WBGene00010478	K01G5.5	98	63.326	MGP_PahariEiJ_G0031735	Dkc1	95	57.692	Mus_pahari
WBGene00010478	K01G5.5	98	63.326	MGP_SPRETEiJ_G0034351	Dkc1	95	57.692	Mus_spretus
WBGene00010478	K01G5.5	98	63.004	ENSMPUG00000016136	DKC1	75	66.995	Mustela_putorius_furo
WBGene00010478	K01G5.5	98	60.780	ENSMLUG00000011918	DKC1	78	64.373	Myotis_lucifugus
WBGene00010478	K01G5.5	63	58.065	ENSNGAG00000015724	-	95	57.692	Nannospalax_galili
WBGene00010478	K01G5.5	88	66.667	ENSNBRG00000005638	dkc1	81	66.005	Neolamprologus_brichardi
WBGene00010478	K01G5.5	98	64.399	ENSNLEG00000014323	DKC1	80	67.312	Nomascus_leucogenys
WBGene00010478	K01G5.5	96	60.941	ENSMEUG00000001066	DKC1	90	62.379	Notamacropus_eugenii
WBGene00010478	K01G5.5	79	62.000	ENSOPRG00000005248	DKC1	71	61.625	Ochotona_princeps
WBGene00010478	K01G5.5	91	67.726	ENSODEG00000011816	-	89	63.436	Octodon_degus
WBGene00010478	K01G5.5	63	57.706	ENSODEG00000000549	-	95	57.343	Octodon_degus
WBGene00010478	K01G5.5	97	62.500	ENSONIG00000013889	dkc1	82	65.526	Oreochromis_niloticus
WBGene00010478	K01G5.5	95	64.319	ENSOANG00000008713	-	81	67.176	Ornithorhynchus_anatinus
WBGene00010478	K01G5.5	51	58.009	ENSOANG00000022295	-	64	58.009	Ornithorhynchus_anatinus
WBGene00010478	K01G5.5	97	64.531	ENSOCUG00000012646	DKC1	81	67.312	Oryctolagus_cuniculus
WBGene00010478	K01G5.5	96	59.071	ENSORLG00000018748	dkc1	92	57.692	Oryzias_latipes
WBGene00010478	K01G5.5	92	64.706	ENSOMEG00000005786	dkc1	85	65.726	Oryzias_melastigma
WBGene00010478	K01G5.5	98	63.371	ENSOGAG00000003399	DKC1	79	66.344	Otolemur_garnettii
WBGene00010478	K01G5.5	97	63.470	ENSOARG00000003047	DKC1	82	66.586	Ovis_aries
WBGene00010478	K01G5.5	95	65.654	ENSPPAG00000023820	DKC1	80	67.312	Pan_paniscus
WBGene00010478	K01G5.5	97	64.302	ENSPPRG00000009104	DKC1	81	66.828	Panthera_pardus
WBGene00010478	K01G5.5	92	66.748	ENSPTIG00000017469	DKC1	83	66.667	Panthera_tigris_altaica
WBGene00010478	K01G5.5	98	65.068	ENSPTRG00000022449	DKC1	80	67.312	Pan_troglodytes
WBGene00010478	K01G5.5	98	65.068	ENSPTRG00000043416	-	70	67.312	Pan_troglodytes
WBGene00010478	K01G5.5	98	64.840	ENSPANG00000011978	DKC1	80	67.070	Papio_anubis
WBGene00010478	K01G5.5	96	63.529	ENSPKIG00000008443	dkc1	83	65.903	Paramormyrops_kingsleyae
WBGene00010478	K01G5.5	80	67.416	ENSPSIG00000013765	DKC1	85	67.416	Pelodiscus_sinensis
WBGene00010478	K01G5.5	88	65.306	ENSPMGG00000004097	dkc1	74	64.677	Periophthalmus_magnuspinnatus
WBGene00010478	K01G5.5	73	67.403	ENSPEMG00000013348	Dkc1	75	66.901	Peromyscus_maniculatus_bairdii
WBGene00010478	K01G5.5	95	63.183	ENSPCIG00000016706	DKC1	69	65.291	Phascolarctos_cinereus
WBGene00010478	K01G5.5	97	61.432	ENSPFOG00000018653	dkc1	81	64.619	Poecilia_formosa
WBGene00010478	K01G5.5	97	61.432	ENSPLAG00000003272	dkc1	74	64.619	Poecilia_latipinna
WBGene00010478	K01G5.5	97	61.021	ENSPMEG00000010413	dkc1	81	64.619	Poecilia_mexicana
WBGene00010478	K01G5.5	97	61.201	ENSPREG00000004100	dkc1	79	65.012	Poecilia_reticulata
WBGene00010478	K01G5.5	98	65.068	ENSPPYG00000020892	DKC1	81	67.312	Pongo_abelii
WBGene00010478	K01G5.5	83	68.108	ENSPCAG00000015034	DKC1	72	68.108	Procavia_capensis
WBGene00010478	K01G5.5	97	64.286	ENSPCOG00000026874	DKC1	80	66.344	Propithecus_coquereli
WBGene00010478	K01G5.5	98	63.908	ENSPVAG00000009222	DKC1	82	66.019	Pteropus_vampyrus
WBGene00010478	K01G5.5	88	66.412	ENSPNYG00000020063	dkc1	80	65.757	Pundamilia_nyererei
WBGene00010478	K01G5.5	96	62.061	ENSPNAG00000005780	dkc1	80	65.509	Pygocentrus_nattereri
WBGene00010478	K01G5.5	97	62.156	ENSRNOG00000055562	Dkc1	80	64.706	Rattus_norvegicus
WBGene00010478	K01G5.5	98	64.840	ENSRBIG00000028457	DKC1	69	67.070	Rhinopithecus_bieti
WBGene00010478	K01G5.5	98	64.840	ENSRROG00000044780	DKC1	80	67.070	Rhinopithecus_roxellana
WBGene00010478	K01G5.5	87	66.494	YLR175W	-	80	66.494	Saccharomyces_cerevisiae
WBGene00010478	K01G5.5	98	65.068	ENSSBOG00000033746	DKC1	80	67.312	Saimiri_boliviensis_boliviensis
WBGene00010478	K01G5.5	98	63.073	ENSSHAG00000002463	DKC1	87	65.860	Sarcophilus_harrisii
WBGene00010478	K01G5.5	97	62.125	ENSSFOG00015009585	dkc1	81	63.990	Scleropages_formosus
WBGene00010478	K01G5.5	97	62.125	ENSSMAG00000002552	dkc1	79	66.581	Scophthalmus_maximus
WBGene00010478	K01G5.5	89	65.743	ENSSDUG00000009963	dkc1	81	64.792	Seriola_dumerili
WBGene00010478	K01G5.5	91	64.604	ENSSLDG00000019342	dkc1	84	65.261	Seriola_lalandi_dorsalis
WBGene00010478	K01G5.5	89	64.646	ENSSARG00000001822	DKC1	81	63.793	Sorex_araneus
WBGene00010478	K01G5.5	94	64.048	ENSSPUG00000018907	DKC1	77	65.764	Sphenodon_punctatus
WBGene00010478	K01G5.5	88	65.394	ENSSPAG00000002585	dkc1	77	64.604	Stegastes_partitus
WBGene00010478	K01G5.5	90	67.168	ENSSSCG00000012823	DKC1	86	66.505	Sus_scrofa
WBGene00010478	K01G5.5	89	64.736	ENSTGUG00000006781	DKC1	83	67.380	Taeniopygia_guttata
WBGene00010478	K01G5.5	97	62.269	ENSTRUG00000004413	dkc1	82	64.865	Takifugu_rubripes
WBGene00010478	K01G5.5	97	50.780	ENSTNIG00000002582	dkc1	79	53.110	Tetraodon_nigroviridis
WBGene00010478	K01G5.5	66	62.542	ENSTBEG00000011262	DKC1	76	65.343	Tupaia_belangeri
WBGene00010478	K01G5.5	62	68.231	ENSTTRG00000008089	DKC1	55	68.231	Tursiops_truncatus
WBGene00010478	K01G5.5	98	63.901	ENSUAMG00000022721	DKC1	87	67.070	Ursus_americanus
WBGene00010478	K01G5.5	98	63.453	ENSUMAG00000016899	DKC1	92	69.415	Ursus_maritimus
WBGene00010478	K01G5.5	97	51.494	ENSVVUG00000021671	-	75	54.167	Vulpes_vulpes
WBGene00010478	K01G5.5	98	62.889	ENSVVUG00000020734	-	72	65.714	Vulpes_vulpes
WBGene00010478	K01G5.5	99	62.132	ENSXETG00000032517	DKC1	82	64.964	Xenopus_tropicalis
WBGene00010478	K01G5.5	89	64.987	ENSXCOG00000005498	dkc1	84	65.394	Xiphophorus_couchianus
WBGene00010478	K01G5.5	97	60.970	ENSXMAG00000004919	dkc1	82	64.373	Xiphophorus_maculatus