EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00010890 (Gene tree)
Gene ID: -
Gene Symbol: ddb-1
Alias: -
Full Name: DNA damage-binding protein 1
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 6374 bases
Position: chrIV:12114810-12121183
Accession: Q21554
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
M18	CPSF_A	PF03178.15	1.8e-74	1	1
M18	CPSF_A	PF03178.15	1.8e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
M18.5.1	-	3856	NM_069898	M18.5.1	1134 (aa)	NP_502299	Q21554
M18.5.2	-	3836	NM_069898	M18.5.2	1134 (aa)	NP_502299	Q21554

Gene Model

Click here to download WBGene00010890's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00010890's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00010890	ddb-1	100	37.126	ENSG00000167986	DDB1	100	41.053	Homo_sapiens
WBGene00010890	ddb-1	98	37.160	ENSAPOG00000005036	ddb1	100	37.972	Acanthochromis_polyacanthus
WBGene00010890	ddb-1	100	37.211	ENSAMEG00000016518	DDB1	100	37.297	Ailuropoda_melanoleuca
WBGene00010890	ddb-1	86	37.972	ENSACIG00000020624	ddb1	100	37.972	Amphilophus_citrinellus
WBGene00010890	ddb-1	100	36.955	ENSAOCG00000003066	ddb1	100	36.955	Amphiprion_ocellaris
WBGene00010890	ddb-1	100	36.955	ENSAPEG00000000092	ddb1	100	36.955	Amphiprion_percula
WBGene00010890	ddb-1	95	37.114	ENSATEG00000020571	ddb1	100	37.214	Anabas_testudineus
WBGene00010890	ddb-1	99	36.883	ENSAPLG00000007174	DDB1	99	36.883	Anas_platyrhynchos
WBGene00010890	ddb-1	100	37.040	ENSACAG00000017758	DDB1	100	37.126	Anolis_carolinensis
WBGene00010890	ddb-1	100	37.126	ENSANAG00000021878	DDB1	100	37.211	Aotus_nancymaae
WBGene00010890	ddb-1	100	36.869	ENSACLG00000012401	ddb1	100	36.869	Astatotilapia_calliptera
WBGene00010890	ddb-1	100	37.211	ENSBTAG00000021569	DDB1	93	37.297	Bos_taurus
WBGene00010890	ddb-1	100	37.126	ENSCJAG00000019319	DDB1	100	37.211	Callithrix_jacchus
WBGene00010890	ddb-1	100	37.211	ENSCAFG00000016264	DDB1	100	37.297	Canis_familiaris
WBGene00010890	ddb-1	94	37.477	ENSCAFG00020012722	DDB1	99	37.568	Canis_lupus_dingo
WBGene00010890	ddb-1	100	37.211	ENSCHIG00000014969	DDB1	100	37.297	Capra_hircus
WBGene00010890	ddb-1	100	36.869	ENSTSYG00000008027	DDB1	100	36.955	Carlito_syrichta
WBGene00010890	ddb-1	98	36.751	ENSCAPG00000010786	DDB1	100	37.021	Cavia_aperea
WBGene00010890	ddb-1	100	36.775	ENSCPOG00000009956	DDB1	100	37.040	Cavia_porcellus
WBGene00010890	ddb-1	100	37.126	ENSCCAG00000035883	DDB1	100	37.211	Cebus_capucinus
WBGene00010890	ddb-1	100	36.201	ENSCATG00000044495	DDB1	100	36.201	Cercocebus_atys
WBGene00010890	ddb-1	100	36.775	ENSCLAG00000004126	DDB1	100	37.040	Chinchilla_lanigera
WBGene00010890	ddb-1	100	37.126	ENSCSAG00000006392	DDB1	100	37.211	Chlorocebus_sabaeus
WBGene00010890	ddb-1	86	37.593	ENSCHOG00000011377	DDB1	89	37.848	Choloepus_hoffmanni
WBGene00010890	ddb-1	100	36.784	ENSCPBG00000017728	DDB1	100	36.869	Chrysemys_picta_bellii
WBGene00010890	ddb-1	100	34.846	ENSCING00000007437	-	100	34.846	Ciona_intestinalis
WBGene00010890	ddb-1	94	33.394	ENSCSAVG00000004783	-	100	33.333	Ciona_savignyi
WBGene00010890	ddb-1	100	37.126	ENSCANG00000019948	DDB1	100	37.211	Colobus_angolensis_palliatus
WBGene00010890	ddb-1	100	37.126	ENSCGRG00001016599	Ddb1	100	37.211	Cricetulus_griseus_chok1gshd
WBGene00010890	ddb-1	100	37.126	ENSCGRG00000013427	Ddb1	100	37.211	Cricetulus_griseus_crigri
WBGene00010890	ddb-1	93	37.167	ENSCSEG00000012499	ddb1	100	37.475	Cynoglossus_semilaevis
WBGene00010890	ddb-1	94	37.296	ENSCVAG00000019531	ddb1	99	37.296	Cyprinodon_variegatus
WBGene00010890	ddb-1	100	37.094	ENSDARG00000074431	ddb1	100	36.914	Danio_rerio
WBGene00010890	ddb-1	95	37.140	ENSDNOG00000014884	DDB1	98	37.230	Dasypus_novemcinctus
WBGene00010890	ddb-1	84	35.884	ENSDORG00000000127	Ddb1	100	36.016	Dipodomys_ordii
WBGene00010890	ddb-1	100	36.168	FBgn0260962	pic	100	36.168	Drosophila_melanogaster
WBGene00010890	ddb-1	70	32.975	ENSETEG00000001053	-	71	33.393	Echinops_telfairi
WBGene00010890	ddb-1	78	37.624	ENSEBUG00000014593	ddb1	97	37.624	Eptatretus_burgeri
WBGene00010890	ddb-1	100	37.371	ENSEASG00005008184	DDB1	100	37.371	Equus_asinus_asinus
WBGene00010890	ddb-1	100	37.371	ENSECAG00000012136	DDB1	100	37.371	Equus_caballus
WBGene00010890	ddb-1	78	35.691	ENSEEUG00000003194	DDB1	78	36.378	Erinaceus_europaeus
WBGene00010890	ddb-1	100	37.297	ENSELUG00000023868	ddb1	100	37.297	Esox_lucius
WBGene00010890	ddb-1	100	37.211	ENSFCAG00000029716	DDB1	100	37.297	Felis_catus
WBGene00010890	ddb-1	100	37.031	ENSFALG00000011981	DDB1	100	37.031	Ficedula_albicollis
WBGene00010890	ddb-1	100	36.869	ENSFDAG00000005128	DDB1	100	36.955	Fukomys_damarensis
WBGene00010890	ddb-1	88	36.544	ENSFHEG00000022133	ddb1	96	36.544	Fundulus_heteroclitus
WBGene00010890	ddb-1	77	44.170	ENSGMOG00000019386	ddb1	90	44.170	Gadus_morhua
WBGene00010890	ddb-1	100	37.158	ENSGALG00000042333	DDB1	100	37.158	Gallus_gallus
WBGene00010890	ddb-1	94	37.205	ENSGAFG00000013142	ddb1	99	37.205	Gambusia_affinis
WBGene00010890	ddb-1	96	36.786	ENSGACG00000017182	ddb1	100	36.786	Gasterosteus_aculeatus
WBGene00010890	ddb-1	95	36.837	ENSGAGG00000014124	DDB1	100	36.927	Gopherus_agassizii
WBGene00010890	ddb-1	100	37.126	ENSGGOG00000004052	DDB1	100	37.211	Gorilla_gorilla
WBGene00010890	ddb-1	100	36.869	ENSHBUG00000008873	ddb1	100	36.927	Haplochromis_burtoni
WBGene00010890	ddb-1	100	36.784	ENSHGLG00000018430	DDB1	100	36.869	Heterocephalus_glaber_female
WBGene00010890	ddb-1	100	36.356	ENSHGLG00100014475	DDB1	100	36.441	Heterocephalus_glaber_male
WBGene00010890	ddb-1	94	37.376	ENSHCOG00000018670	ddb1	98	37.376	Hippocampus_comes
WBGene00010890	ddb-1	100	37.468	ENSIPUG00000005612	DDB1	100	37.468	Ictalurus_punctatus
WBGene00010890	ddb-1	100	37.211	ENSSTOG00000007552	DDB1	100	37.297	Ictidomys_tridecemlineatus
WBGene00010890	ddb-1	100	37.040	ENSJJAG00000017769	Ddb1	100	37.126	Jaculus_jaculus
WBGene00010890	ddb-1	94	37.205	ENSKMAG00000002315	ddb1	99	37.205	Kryptolebias_marmoratus
WBGene00010890	ddb-1	84	38.032	ENSLBEG00000017065	ddb1	99	38.032	Labrus_bergylta
WBGene00010890	ddb-1	100	37.148	ENSLACG00000017611	DDB1	100	37.148	Latimeria_chalumnae
WBGene00010890	ddb-1	90	37.346	ENSLOCG00000000012	ddb1	98	37.346	Lepisosteus_oculatus
WBGene00010890	ddb-1	100	37.040	ENSLAFG00000011513	DDB1	100	37.126	Loxodonta_africana
WBGene00010890	ddb-1	100	37.126	ENSMFAG00000042035	DDB1	100	37.211	Macaca_fascicularis
WBGene00010890	ddb-1	98	37.303	ENSMMUG00000002691	DDB1	100	41.053	Macaca_mulatta
WBGene00010890	ddb-1	100	37.126	ENSMNEG00000031559	DDB1	100	37.211	Macaca_nemestrina
WBGene00010890	ddb-1	100	37.126	ENSMLEG00000044136	DDB1	100	37.211	Mandrillus_leucophaeus
WBGene00010890	ddb-1	100	36.955	ENSMAMG00000014372	ddb1	100	36.955	Mastacembelus_armatus
WBGene00010890	ddb-1	100	36.784	ENSMZEG00005013835	ddb1	100	36.784	Maylandia_zebra
WBGene00010890	ddb-1	93	37.500	ENSMGAG00000004990	DDB1	99	37.500	Meleagris_gallopavo
WBGene00010890	ddb-1	100	37.126	ENSMAUG00000012926	Ddb1	100	37.211	Mesocricetus_auratus
WBGene00010890	ddb-1	100	37.126	ENSMICG00000013703	DDB1	100	37.211	Microcebus_murinus
WBGene00010890	ddb-1	100	37.126	ENSMOCG00000020499	Ddb1	100	37.211	Microtus_ochrogaster
WBGene00010890	ddb-1	86	38.072	ENSMMOG00000001758	ddb1	100	38.072	Mola_mola
WBGene00010890	ddb-1	100	35.859	ENSMODG00000020353	DDB1	100	35.943	Monodelphis_domestica
WBGene00010890	ddb-1	100	37.040	ENSMALG00000014071	ddb1	100	37.040	Monopterus_albus
WBGene00010890	ddb-1	100	37.126	MGP_CAROLIEiJ_G0022695	Ddb1	100	37.211	Mus_caroli
WBGene00010890	ddb-1	100	37.126	ENSMUSG00000024740	Ddb1	100	37.211	Mus_musculus
WBGene00010890	ddb-1	100	37.126	MGP_PahariEiJ_G0014189	Ddb1	100	37.211	Mus_pahari
WBGene00010890	ddb-1	100	37.126	MGP_SPRETEiJ_G0023609	Ddb1	100	37.211	Mus_spretus
WBGene00010890	ddb-1	100	36.208	ENSMPUG00000014200	DDB1	100	36.263	Mustela_putorius_furo
WBGene00010890	ddb-1	100	36.955	ENSMLUG00000013232	DDB1	100	37.040	Myotis_lucifugus
WBGene00010890	ddb-1	100	37.040	ENSNGAG00000009384	Ddb1	100	37.040	Nannospalax_galili
WBGene00010890	ddb-1	100	36.955	ENSNBRG00000019581	ddb1	100	36.955	Neolamprologus_brichardi
WBGene00010890	ddb-1	100	35.878	ENSNLEG00000002022	DDB1	100	35.963	Nomascus_leucogenys
WBGene00010890	ddb-1	90	37.500	ENSMEUG00000001099	DDB1	93	37.500	Notamacropus_eugenii
WBGene00010890	ddb-1	84	38.470	ENSOPRG00000008254	DDB1	84	38.584	Ochotona_princeps
WBGene00010890	ddb-1	100	36.860	ENSODEG00000002419	DDB1	100	37.126	Octodon_degus
WBGene00010890	ddb-1	100	36.784	ENSONIG00000005804	ddb1	100	36.784	Oreochromis_niloticus
WBGene00010890	ddb-1	89	37.596	ENSOANG00000004897	DDB1	98	37.692	Ornithorhynchus_anatinus
WBGene00010890	ddb-1	100	37.211	ENSOCUG00000001667	DDB1	100	37.297	Oryctolagus_cuniculus
WBGene00010890	ddb-1	94	37.024	ENSORLG00000001399	ddb1	98	37.418	Oryzias_latipes
WBGene00010890	ddb-1	94	37.024	ENSORLG00020001277	ddb1	95	37.024	Oryzias_latipes_hni
WBGene00010890	ddb-1	94	37.024	ENSORLG00015002080	ddb1	98	37.024	Oryzias_latipes_hsok
WBGene00010890	ddb-1	94	37.205	ENSOMEG00000006181	ddb1	99	35.714	Oryzias_melastigma
WBGene00010890	ddb-1	100	37.040	ENSOGAG00000016103	DDB1	100	37.126	Otolemur_garnettii
WBGene00010890	ddb-1	98	37.391	ENSOARG00000011716	DDB1	97	37.511	Ovis_aries
WBGene00010890	ddb-1	100	37.126	ENSPPAG00000035343	DDB1	100	37.211	Pan_paniscus
WBGene00010890	ddb-1	100	37.211	ENSPPRG00000013300	DDB1	100	37.297	Panthera_pardus
WBGene00010890	ddb-1	98	37.195	ENSPTIG00000006909	DDB1	98	37.282	Panthera_tigris_altaica
WBGene00010890	ddb-1	100	37.126	ENSPTRG00000003737	DDB1	100	37.211	Pan_troglodytes
WBGene00010890	ddb-1	100	37.126	ENSPANG00000000242	DDB1	100	37.211	Papio_anubis
WBGene00010890	ddb-1	94	37.284	ENSPKIG00000019213	ddb1	94	37.296	Paramormyrops_kingsleyae
WBGene00010890	ddb-1	98	37.034	ENSPSIG00000013275	DDB1	100	37.121	Pelodiscus_sinensis
WBGene00010890	ddb-1	86	37.873	ENSPMGG00000021179	ddb1	100	37.873	Periophthalmus_magnuspinnatus
WBGene00010890	ddb-1	100	37.126	ENSPEMG00000012241	Ddb1	100	37.211	Peromyscus_maniculatus_bairdii
WBGene00010890	ddb-1	89	37.812	ENSPMAG00000008479	ddb1	100	37.812	Petromyzon_marinus
WBGene00010890	ddb-1	100	37.040	ENSPCIG00000002643	DDB1	100	37.126	Phascolarctos_cinereus
WBGene00010890	ddb-1	100	37.009	ENSPFOG00000002768	ddb1	100	37.009	Poecilia_formosa
WBGene00010890	ddb-1	100	36.784	ENSPLAG00000017227	ddb1	100	36.784	Poecilia_latipinna
WBGene00010890	ddb-1	100	36.784	ENSPMEG00000011398	ddb1	100	36.784	Poecilia_mexicana
WBGene00010890	ddb-1	94	37.296	ENSPREG00000004440	ddb1	97	37.296	Poecilia_reticulata
WBGene00010890	ddb-1	100	36.488	ENSPPYG00000003193	DDB1	100	36.488	Pongo_abelii
WBGene00010890	ddb-1	78	42.731	ENSPCAG00000011040	DDB1	79	42.731	Procavia_capensis
WBGene00010890	ddb-1	100	36.635	ENSPCOG00000015176	DDB1	100	36.721	Propithecus_coquereli
WBGene00010890	ddb-1	100	37.126	ENSPVAG00000003847	DDB1	100	37.211	Pteropus_vampyrus
WBGene00010890	ddb-1	95	37.444	ENSPNAG00000006635	ddb1	98	37.444	Pygocentrus_nattereri
WBGene00010890	ddb-1	100	37.040	ENSRNOG00000020715	Ddb1	100	37.126	Rattus_norvegicus
WBGene00010890	ddb-1	100	37.126	ENSRBIG00000033611	DDB1	100	37.211	Rhinopithecus_bieti
WBGene00010890	ddb-1	100	37.126	ENSRROG00000041407	DDB1	100	37.211	Rhinopithecus_roxellana
WBGene00010890	ddb-1	100	37.040	ENSSBOG00000019775	DDB1	100	37.126	Saimiri_boliviensis_boliviensis
WBGene00010890	ddb-1	93	36.962	ENSSHAG00000011600	DDB1	99	37.054	Sarcophilus_harrisii
WBGene00010890	ddb-1	95	37.060	ENSSFOG00015011151	ddb1	97	37.060	Scleropages_formosus
WBGene00010890	ddb-1	100	37.126	ENSSMAG00000009495	ddb1	100	37.126	Scophthalmus_maximus
WBGene00010890	ddb-1	100	36.955	ENSSDUG00000004642	ddb1	100	36.955	Seriola_dumerili
WBGene00010890	ddb-1	100	36.955	ENSSLDG00000015804	ddb1	100	36.955	Seriola_lalandi_dorsalis
WBGene00010890	ddb-1	54	47.170	ENSSARG00000003290	-	55	47.170	Sorex_araneus
WBGene00010890	ddb-1	100	36.801	ENSSPUG00000019338	DDB1	100	36.801	Sphenodon_punctatus
WBGene00010890	ddb-1	94	37.296	ENSSPAG00000009888	ddb1	100	36.462	Stegastes_partitus
WBGene00010890	ddb-1	100	36.612	ENSSSCG00000013094	DDB1	100	36.698	Sus_scrofa
WBGene00010890	ddb-1	100	36.784	ENSTGUG00000006414	DDB1	100	36.784	Taeniopygia_guttata
WBGene00010890	ddb-1	94	37.284	ENSTRUG00000016682	ddb1	100	36.128	Takifugu_rubripes
WBGene00010890	ddb-1	87	36.220	ENSTNIG00000009565	ddb1	99	36.220	Tetraodon_nigroviridis
WBGene00010890	ddb-1	93	36.641	ENSTTRG00000011055	DDB1	94	36.641	Tursiops_truncatus
WBGene00010890	ddb-1	94	37.477	ENSUAMG00000017793	DDB1	93	37.568	Ursus_americanus
WBGene00010890	ddb-1	94	37.477	ENSUMAG00000011788	DDB1	98	37.568	Ursus_maritimus
WBGene00010890	ddb-1	90	36.681	ENSVPAG00000007963	DDB1	92	36.786	Vicugna_pacos
WBGene00010890	ddb-1	100	37.126	ENSVVUG00000004987	DDB1	100	37.211	Vulpes_vulpes
WBGene00010890	ddb-1	100	37.031	ENSXETG00000008820	ddb1	100	37.031	Xenopus_tropicalis
WBGene00010890	ddb-1	86	38.072	ENSXCOG00000013956	ddb1	100	38.072	Xiphophorus_couchianus
WBGene00010890	ddb-1	94	37.296	ENSXMAG00000000022	ddb1	99	37.296	Xiphophorus_maculatus