EuRBPDB

Description

RBDs

Transcripts

Gene Model

Orthologs

Description

Ensembl ID: WBGene00010908 (Gene tree)
Gene ID: -
Gene Symbol: zbp-1
Alias: -
Full Name: Zipcode Binding Protein homolog
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 6733 bases
Position: chrIII:4553618-4560350
Accession: K8FE02
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
M88	KH_1	PF00013.29	5.3e-58	1	4
M88	KH_1	PF00013.29	5.3e-58	2	4
M88	KH_1	PF00013.29	5.3e-58	3	4
M88	KH_1	PF00013.29	5.3e-58	4	4
M88	KH_1	PF00013.29	6.7e-58	1	4
M88	KH_1	PF00013.29	6.7e-58	2	4
M88	KH_1	PF00013.29	6.7e-58	3	4
M88	KH_1	PF00013.29	6.7e-58	4	4
M88	KH_1	PF00013.29	1.5e-57	1	4
M88	KH_1	PF00013.29	1.5e-57	2	4
M88	KH_1	PF00013.29	1.5e-57	3	4
M88	KH_1	PF00013.29	1.5e-57	4	4
M88	KH_1	PF00013.29	1.8e-57	1	4
M88	KH_1	PF00013.29	1.8e-57	2	4
M88	KH_1	PF00013.29	1.8e-57	3	4
M88	KH_1	PF00013.29	1.8e-57	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
M88.5d	-	2927	NM_001276772	M88.5d	730 (aa)	NP_001263701	K8ERX1
M88.5a	-	2764	NM_001027524	M88.5a	828 (aa)	NP_001022695	Q21605
M88.5b	-	2425	NM_001027525	M88.5b	704 (aa)	NP_001022696	Q6A582
M88.5c	-	2842	NM_001276771	M88.5c	854 (aa)	NP_001263700	K8FE02

Gene Model

Click here to download WBGene00010908's gene model file

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00010908	zbp-1	65	32.708	FBgn0285926	Imp	66	33.117	Drosophila_melanogaster